BAC Information

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BAC

Clone NameB6Ng01-159B17
Chromosome7 (Build37)
Map Location 33,337,882 - 33,339,011
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591
Downstream geneLOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159B17.bB6Ng01-159B17.g
ACCDH952869DH952870
length1,1061,225
definitionDH952869|Mus musculus domesticus DNA, BAC clone: B6Ng01-159B17, 5' end.DH952870|Mus musculus domesticus DNA, BAC clone: B6Ng01-159B17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaagtacatattgtgactttggtctgatttgggaataaggtgtg
ctatgagggctggttagtcaatgactggcaaccagatctcagatcatacc
aatctaagacaggggtatatgccaaaagcccgtggctgttaataatacac
cacaaagccatgcttttgtgaattatgacacaaagtagctacatgtaact
gcctatgacagaattggatggtttgagagtatctgagaccctaaggcatg
cacggccgccagccaccataattttcaggcaggactatggagcataaata
aattttatgcatcagtcaagtttttattaaatataaataacagggaggag
aagtaccctcccacaagcctgaagcaggctgagccagaacttgacattac
tgccactaaggagattatctagggtggagccttcttccctatatcactct
attgttcagatactgtccctgttcctctttaagatactgctacctgctga
gaggccccagagctattcaggagactatgccctatcctgcatgtcatcac
ctgcagctagttcaggatccaaaaatgaattggcaggaatgaactttccc
ccctcttttaaaaagtgtgtctgccattaaacatttgaaccttgatcaga
ctagttgtcttggtttctttatttttcaacccacctaggctccctttttt
ctatcagttccaagatgccttccaggctcggacccggacatgcgagccat
aggccgattcaacagtttgggaggctcaacttcatcctaacttagaatca
cacatgccaaatttgtatttttgtcctagtcctcccacccctaacacagc
ttcaagaaaaccacacagctaagaaaacagttctcctgaccacctaatct
tagatgacagtgtagttttccgtttgcaatctgacactaattttttttaa
gtgatgtttgccagatatgatgttcatatgtatagaaattttatctcacc
tgggtttccactcagctttgttcttagtttctggataaatacccacagaa
cttttatttacattagctttatcacatagaagtggatagaagctctatgc
tagcaa
gaattcacacctagtcactgcccatctcgggacatagtaatggggtgatg
ggctagcaatgaatcaggagctgtcacgcaacatcaggtgctgaaacgtc
acactgcgggctatataagcagcaccattttctgggttcggggtcttcct
cctgagaagtaaccaataaagccttttgcgacagaagattccagttgtcc
tgagtgtgttcttgccagtggggaccaaagctcggggaataagtggcgcc
gaagacccgggaagaccattacactggcgcaagggagatccctcgttcat
ggggcagattcagaactgtgggacacgttacagctttaccaggtatgtct
ggccttgaactttctccagcgttagaagccttcctgttccttttcacatg
tcaacaagtggttaaggtagggcagggaattctggactaaattcaaaaca
gtctatcagagttaaagcggggagagagagcaggagcaaagaggaaacac
agtgcaccaattaagcatacaggcctttccatgggtctcgaacctgagga
aaagatcaatcagggaagaatacctggggagagtttggaaggaaggagaa
gaaaaaagagaagcaaaaaaatcaatcagcggatgtttctagaagaagga
gcctatacccgccactagatgagtttaagcggctagctcttagtagctca
gaaccagatgaaggacttagctcctctgaagaaacggacttggaggagga
agcagttcattataagggagaaagttaccagcagataaaatgcagctact
cagtccagaaaaaggcaaaaggagctggcaaaagccagcttgctgctttg
gcctctggactgtcggcttcaagtcctagtgcacctctgccctatgtgca
gaggttccattcagaaccttatgagcagagaaaccgtttagacttgttca
ttccaaagaggacagagaaaatgcacaagcatttccatttttggaggagc
tgaggtggtcgtgggtcacgctccggtgagtatatcagattaagaagctt
gcgaagcagtccccaactattgaagtcgcctatattttcctatagcacaa
gtctaagggctggcaatcacctatgactcctcggtagattggagacactt
agcaaactgcgacccaatatggaataatcttgtaggtagcatctggtgga
gatcctcgtctctacactctatgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33337882_33339011
seq2: B6Ng01-159B17.b_48_1153 (reverse)

seq1  TTGCTAGCATAGAGTTTTCTATCCACTTCTTATGTTGATTAAAGCTTATG  50
      ||||||||||||||  ||||||||||||| |||| ||| ||||||| || 
seq2  TTGCTAGCATAGAG-CTTCTATCCACTTC-TATG-TGA-TAAAGCTAAT-  45

seq1  GTAAATATAAAGTTTCTGTGTGTATTTTATCCAGAAACTAAAGAACCAAA  100
      ||||||| |||| ||||||| ||| |||||||||||||| ||||| ||||
seq2  GTAAATA-AAAG-TTCTGTGGGTA-TTTATCCAGAAACT-AAGAA-CAAA  90

seq1  GCTTGGGTGGAAACCCCAGGTTGAGATTAAAATTTCCTATAACATATTGG  150
      || || ||||||| |||||| ||||| |||||||| |||| ||||||  |
seq2  GC-TGAGTGGAAA-CCCAGG-TGAGA-TAAAATTT-CTAT-ACATAT--G  132

seq1  AACATCATTATCTGGCAAACATTCACTTAAAAAAAAATTAGTGTCAGATT  200
      ||||||| ||||||||||||| |||||| |||||||||||||||||||||
seq2  AACATCA-TATCTGGCAAACA-TCACTT-AAAAAAAATTAGTGTCAGATT  179

seq1  GCCAAACGGAAAACTTACACTGTCATCTTAAGATTAGGTGGTCAGGAGAA  250
      | |||||||||||| |||||||||||| ||||||||||||||||||||||
seq2  G-CAAACGGAAAAC-TACACTGTCATC-TAAGATTAGGTGGTCAGGAGAA  226

seq1  CTGTTTTCTTAGCTGTGTGGTTTTCTTGAAGCTGTGTTAGGGGTGGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTCTTAGCTGTGTGGTTTTCTTGAAGCTGTGTTAGGGGTGGGAGG  276

seq1  ACTAGGACAAAAATACAAATTTGGCATGTGTGATTCTAAGTTAGGATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGACAAAAATACAAATTTGGCATGTGTGATTCTAAGTTAGGATGAA  326

seq1  GTTGAGCCTCCCAAACTGTTGAATCGGCCTATGGCTCGCATGTCCGGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGCCTCCCAAACTGTTGAATCGGCCTATGGCTCGCATGTCCGGGTC  376

seq1  CGAGCCTGGAAGGCATCTTGGAACTGATAGAAAAAAGGGAGCCTAGGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCCTGGAAGGCATCTTGGAACTGATAGAAAAAAGGGAGCCTAGGTGG  426

seq1  GTTGAAAAATAAAGAAACCAAGACAACTAGTCTGATCAAGGTTCAAATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAAAATAAAGAAACCAAGACAACTAGTCTGATCAAGGTTCAAATGT  476

seq1  TTAATGGCAGACACACTTTTTAAAAGAGGGGGGAAAGTTCATTCCTGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGCAGACACACTTTTTAAAAGAGGGGGGAAAGTTCATTCCTGCCA  526

seq1  ATTCATTTTTGGATCCTGAACTAGCTGCAGGTGATGACATGCAGGATAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTTTGGATCCTGAACTAGCTGCAGGTGATGACATGCAGGATAGG  576

seq1  GCATAGTCTCCTGAATAGCTCTGGGGCCTCTCAGCAGGTAGCAGTATCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGTCTCCTGAATAGCTCTGGGGCCTCTCAGCAGGTAGCAGTATCTT  626

seq1  AAAGAGGAACAGGGACAGTATCTGAACAATAGAGTGATATAGGGAAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGAACAGGGACAGTATCTGAACAATAGAGTGATATAGGGAAGAAG  676

seq1  GCTCCACCCTAGATAATCTCCTTAGTGGCAGTAATGTCAAGTTCTGGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACCCTAGATAATCTCCTTAGTGGCAGTAATGTCAAGTTCTGGCTC  726

seq1  AGCCTGCTTCAGGCTTGTGGGAGGGTACTTCTCCTCCCTGTTATTTATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCTTCAGGCTTGTGGGAGGGTACTTCTCCTCCCTGTTATTTATAT  776

seq1  TTAATAAAAACTTGACTGATGCATAAAATTTATTTATGCTCCATAGTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAAAACTTGACTGATGCATAAAATTTATTTATGCTCCATAGTCCT  826

seq1  GCCTGAAAATTATGGTGGCTGGCGGCCGTGCATGCCTTAGGGTCTCAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAAATTATGGTGGCTGGCGGCCGTGCATGCCTTAGGGTCTCAGAT  876

seq1  ACTCTCAAACCATCCAATTCTGTCATAGGCAGTTACATGTAGCTACTTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCAAACCATCCAATTCTGTCATAGGCAGTTACATGTAGCTACTTTG  926

seq1  TGTCATAATTCACAAAAGCATGGCTTTGTGGTGTATTATTAACAGCCACG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATAATTCACAAAAGCATGGCTTTGTGGTGTATTATTAACAGCCACG  976

seq1  GGCTTTTGGCATATACCCCTGTCTTAGATTGGTATGATCTGAGATCTGGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTGGCATATACCCCTGTCTTAGATTGGTATGATCTGAGATCTGGT  1026

seq1  TGCCAGTCATTGACTAACCAGCCCTCATAGCACACCTTATTCCCAAATCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTCATTGACTAACCAGCCCTCATAGCACACCTTATTCCCAAATCA  1076

seq1  GACCAAAGTCACAATATGTACTTAGAATTC  1130
      ||||||||||||||||||||||||||||||
seq2  GACCAAAGTCACAATATGTACTTAGAATTC  1106