BAC Information

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BAC

Clone NameB6Ng01-159J11
Chromosome7 (Build37)
Map Location 107,146,225 - 107,147,314
singlet/doubletsinglet
Overlap genenone
Upstream geneUvrag, Dgat2, Mogat2, Mtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602
Downstream geneChrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159J11.bB6Ng01-159J11.g
ACCDH953209DH953210
length1,088903
definitionDH953209|Mus musculus domesticus DNA, BAC clone: B6Ng01-159J11, 5' end.DH953210|Mus musculus domesticus DNA, BAC clone: B6Ng01-159J11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcagaatcacgttgtcagaattgagtgggcgaggtcccctaa
cccctgtgatccaggttgcaatgctggttctacactgatgagcaatctct
aggccacaaataactcatgaccagaacaaggaagacctcttaaaccgttg
tccatctggactcacattcacctgaaaagattttactgttacaggctatc
taggtatcaaaatgttattaataataaatcttaaattcatttaaaaataa
tcgtttgcagtaaggctacctttactctttattagacacaaaaagacatt
ggcgccgggcgtgttggtgcatgcctttaatcccagcacttgggagacag
agactggcagatttctgagttcaaggccagcctggtctacaaagtgagtt
ccaggacagccagggctatacagagaaaccctgtcttgaaaaacaaaaaa
caaaaaaaccccaaaacaaacaaacaaacaaaagacattagcatgctaat
gagatgaatgtgcttaactgttgttagataaacaattaggtcttgtctgg
atgtttgacgctgtagactatgaagcctattccaagtctttcgggattgg
ccaatattttggtttcctaatggcagatgctggaaatgccacatttcaaa
agtaagtattaacacagaggcacgtcagggtcttctcagcagttatccaa
aactctgtcctaatcctatattcatccaacagttctttttcatgaaactc
gagttagtaagttagtttaaaaacaataaatttcaaagtcaactgtcatt
atatccagcataaaggaggcaaaagcaagcaggtctccgacttccagtca
gcctgtctacacagtgagttcctcctggacctaaggttccacgagaggct
gagaagagtaggagttcaaggctcaacctggcaagttcatgagacttcat
gtcaaaatacagaaactgggtctaacaggctgtttgaagcaatgggaatc
tacctcagcaaccctcatttagtgcaaaggtgaataaaagtagtgctgaa
gacaagggagaaattagttaaacctcaatttgggtcct
gaattctggcacttttcagagggtataaaaatgccagagtctcaagaggc
tgaggtggctgcaaattctcctgctgctgtggtttgtcaagtggtcgtaa
gcaaagaaatagagaagaaattgtatatcctgacttggaagattggactt
gccccaaggaaatcaatgcccccaatcagcaggaagtaatctaacaagat
tgaacttccttttccctctagccttctttctttcctacctagtgttgagg
ggttggaagggtgaaaaggggtggtaagaaaaagaacccaataaagtagc
caaaagtcagaatcaacactctcaatttcaaagctggactagagatctat
agtaataacaattacatatggtattggcacaaaagcagacatgctgttaa
atggaatctaattgaagacctacacataaatctacacacctatgcacacc
agattcttgataaaagaagccagaaatacacactggaaaaaagacagaat
cttcaacaaatggtgctggacaaactgcacagctgcatatagaaaaatcc
aaatagatccatactttaccaccctgcacagaactcaactccaaatggac
caaaagacctcagcataaaaactgaatacactgaaccttatagaagagaa
actgggcaataaccttgaactccttagcaaaagaaaagactttctgaaca
taacaccatttaacacaggcactaaaatcaacaactaataaatgggggtc
tcataatactgagaggcttctggaaagcaaaggacaccgtattcagacaa
agtggcagccctacagaatagggaaacgtttctccaactatacatccata
gagggctaatatcccaaatataaggaactcaggatacttgatatcacgat
aac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_107146225_107147314
seq2: B6Ng01-159J11.b_45_1132

seq1  GAATTCTTTCAGAATCACGTTGTCAGAATTGAGTGGGCGAGGTCCCCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGAATCACGTTGTCAGAATTGAGTGGGCGAGGTCCCCTAA  50

seq1  CCCCTGTGATCCAGGTTGCAATGCTGGTTCTACACTGATGAGCAATCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGTGATCCAGGTTGCAATGCTGGTTCTACACTGATGAGCAATCTCT  100

seq1  AGGCCACAAATAACTCATGACCAGAACAAGGAAGACCTCTTAAACCGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACAAATAACTCATGACCAGAACAAGGAAGACCTCTTAAACCGTTG  150

seq1  TCCATCTGGACTCACATTCACCTGAAAAGATTTTACTGTTACAGGCTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTGGACTCACATTCACCTGAAAAGATTTTACTGTTACAGGCTATC  200

seq1  TAGGTATCAAAATGTTATTAATAATAAATCTTAAATTCATTTAAAAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATCAAAATGTTATTAATAATAAATCTTAAATTCATTTAAAAATAA  250

seq1  TCGTTTGCAGTAAGGCTACCTTTACTCTTTATTAGACACAAAAAGACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTGCAGTAAGGCTACCTTTACTCTTTATTAGACACAAAAAGACATT  300

seq1  GGCGCCGGGCGTGTTGGTGCATGCCTTTAATCCCAGCACTTGGGAGACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCCGGGCGTGTTGGTGCATGCCTTTAATCCCAGCACTTGGGAGACAG  350

seq1  AGACAGGCAGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAAAGTGAGTT  400
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGCAGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAAAGTGAGTT  400

seq1  CCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTTGAAAAACAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTTGAAAAACAAAAAA  450

seq1  CAAAAAAACCCCAAAACAAACAAACAAACAAAAGACATTAGCATGCTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAACCCCAAAACAAACAAACAAACAAAAGACATTAGCATGCTAAT  500

seq1  GAGATGAATGTGCTTAACTGTTGTTAGATAAACAATTAGGTCTTGTCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGAATGTGCTTAACTGTTGTTAGATAAACAATTAGGTCTTGTCTGG  550

seq1  ATGTTTGACGCTGTAGACTATGAAGCCTATTCCAAGTCTTTCGGGATTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGACGCTGTAGACTATGAAGCCTATTCCAAGTCTTTCGGGATTGG  600

seq1  CCAATATTTTGGTTTCCTAATGGCAGATGCTGGAAATGCCACATTTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATTTTGGTTTCCTAATGGCAGATGCTGGAAATGCCACATTTCAAA  650

seq1  AGTAAGTATTAACACAGAGGCACGTCAGGGTCTTCTCAGCAGTTATCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTATTAACACAGAGGCACGTCAGGGTCTTCTCAGCAGTTATCCAA  700

seq1  AACTCTGTCCTAATCCTATATTCATCCAACAGTTCTTTTTCATGAAACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGTCCTAATCCTATATTCATCCAACAGTTCTTTTTCATGAAACTC  750

seq1  GAGTTAGTAAGTTAGTTTAAAAACAAT-AATTTCAAAGTCAACTGTCATT  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAGTTAGTAAGTTAGTTTAAAAACAATAAATTTCAAAGTCAACTGTCATT  800

seq1  ATATCCAGCATAAAGGAGGCAAAAGCAAGCAGGTCTCCGACTTCCAGTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCAGCATAAAGGAGGCAAAAGCAAGCAGGTCTCCGACTTCCAGTCA  850

seq1  GCCTGTCTACACAGTGAGTTCCTCCTGGACCTAAGG-TCCACGAGAGGCT  898
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCCTGTCTACACAGTGAGTTCCTCCTGGACCTAAGGTTCCACGAGAGGCT  900

seq1  GAGGAAGAGTAGGAGTTCAAGGC-CAACCTGGGCAAGTTCATGAGACTCC  947
      || |||||||||||||||||||| |||||| ||||||||||||||||| |
seq2  GA-GAAGAGTAGGAGTTCAAGGCTCAACCT-GGCAAGTTCATGAGACTTC  948

seq1  ATGTCAAAATACAGAAACTGGGTCCTAACAGGCTGTTTGAAGCAATGGGA  997
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATGTCAAAATACAGAAACTGGGT-CTAACAGGCTGTTTGAAGCAATGGGA  997

seq1  ATCTACC-CAGCAACCCTCATTTAGTTGCAAAGGTGAGTAAAAGTATGTG  1046
      ||||||| ||||||||||||||||| ||||||||||| |||||||| |||
seq2  ATCTACCTCAGCAACCCTCATTTAG-TGCAAAGGTGAATAAAAGTA-GTG  1045

seq1  CTGAGGACCAGGGAAGAAATTAGTTAAACACTAATTTGTGTCCT  1090
      |||| ||| |||| |||||||||||||||   |||||| |||||
seq2  CTGAAGACAAGGG-AGAAATTAGTTAAACCTCAATTTGGGTCCT  1088