BAC Information

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BAC

Clone NameB6Ng01-159K17
Chromosome7 (Build37)
Map Location 126,553,301 - 126,688,731
singlet/doubletdoublet
Overlap geneGp2, Umod, 1700007B13Rik, C730027J19Rik
Upstream geneSyt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5, Mir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b, Gpr139, LOC100042871
Downstream geneAcsm2, Acsm1, BC048390, Thumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3, Tmem159, Zp2, Anks4b, Crym, Abca14, Abca15, Abca16, LOC668429
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159K17.bB6Ng01-159K17.g
ACCDH953267DH953268
length1,0761,011
definitionDH953267|Mus musculus domesticus DNA, BAC clone: B6Ng01-159K17, 5' end.DH953268|Mus musculus domesticus DNA, BAC clone: B6Ng01-159K17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,553,301 - 126,554,378)(126,687,724 - 126,688,731)
sequence
gaattccaaaattcaagtataaagtgattcagaggcctttcttctacctc
agcagtgaataaccaggtggcattctgtgtcctaatacatctgttggctt
taatctaactgtcatgtttcctattgctcattggcacagtaatttaactt
tttcctcctaaaacgtcttctggtaaattgtctttgcaggaagacaaacc
attcatattctgcatccttgccccttcctgttgcacttttctgtttgttc
ctcagaagattttaagttatctggggagggggatgtatgggcatatgtaa
ctacattggaggtcagtctcccaggttgctcctccactttgttgagccag
gctctctcactgctctggagctatctgagtaggtctggggtagctggcca
gtaatccccaggatctgcctgcctccaactccccaatgaagtttacatca
cacctgacttttttacagggctttaggggatcagtctgtgcttatgtagg
aagcagtttacagactgagttttctttccactcctaagcctttaattcct
ttagcaggtttcaaagcatgcctagctaacacactcggaaagaccatagt
cttggctgattctttggctctcctccacctcacttgttttcctgatccag
gcacacaacctcctgtgctgacatagtttcttcattttgctcttccagtg
cccatgaccgaaaaagccgttgaacttagggctgaataaatacagtatgc
atagggcttgccaaaacagattcccttttttaatctgacttttttttttc
tggttgccctaagacgtatactttctagaaaattcccagataatgctggt
attgctgggtcagagaccttctctgaggactactcacttcattttgactc
ctgaatgaatccaggtctctaatgggctgaaagaaaacaggtgtgcagct
cttctcccaaccaaccaaatcagaaatctccagatgggagctcatctgtt
tcttagtaactttgatgctcctaagatcagagagcttcacccttatccag
gattaatgtcttaaggtccattcctg
gaattcagcacagcgacacactattggcttattcaaacattaacagaaag
aacacaggacatcaggactttgttgctgtgggctgtgggcttatctttgt
tcacatagcaaccagttgatgtatgtctttacccagcgccaaggggcaat
agacagaggggaggttctggccagatggtgttgacttagataatatagcc
ctgttggtccttgcatacctttttatctttacagtcaagatgttcttagg
aatgccttaacaacagccctgccctggcatgcctggatgctgttctgctt
tgttctcagtctcaggccagggcggtgggctcctaaacaactcacaagtt
acaatatttcatcttccttcagaggaaacacttgcaatgtgaagagaaac
ctcaggatgaagctgacttaccagcactttgatgttacaattaatcctag
aaccaaggaaatagatctttgctgttggagccaacccatcctgggaattg
ccttagcagacctttgcaggttgactttgcttgctatcatttcacaggct
ccaactctgagcaggtgctcaagaaatacatattaaccagtgaggaggaa
tgctgggatttgggtagaagtcacaggcattgctttgtgtctccactagc
ttctcccttttgtggttagtctcgtccatccagagccacacctttttgat
tgagggtctagaagaacatggcttcttgacactgtgccctgggatattta
ctactcaaggactgagcaacaatttgtgaacagagagttagatatgaggc
atggaggtggttttggaagattgtttcttttagggagctgttttgtgaat
atagcttctcacagcaacttcacacacacacacacacacacacacacaca
cacccacacaggagtggctatattccatggtggtgcaataacctgtcagg
gcgcgagggccaatgttcccattttcattatatgttcatcggcttatctt
ttgggggcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_126553301_126554378
seq2: B6Ng01-159K17.b_43_1118

seq1  GAATTCCAAAATTCAAGTATAAAGTGATTCAGAGGCCTTTCTTCTACCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAATTCAAGTATAAAGTGATTCAGAGGCCTTTCTTCTACCTC  50

seq1  AGCAGTGAATAACCAGGTGGCATTCTGTGTCCTAATACATCTGTTGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGAATAACCAGGTGGCATTCTGTGTCCTAATACATCTGTTGGCTT  100

seq1  TAATCTAACTGTCATGTTTCCTATTGCTCATTGGCACAGTAATTTAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTAACTGTCATGTTTCCTATTGCTCATTGGCACAGTAATTTAACTT  150

seq1  TTTCCTCCTAAAACGTCTTCTGGTAAATTGTCTTTGCAGGAAGACAAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCTAAAACGTCTTCTGGTAAATTGTCTTTGCAGGAAGACAAACC  200

seq1  ATTCATATTCTGCATCCTTGCCCCTTCCTGTTGCACTTTTCTGTTTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATATTCTGCATCCTTGCCCCTTCCTGTTGCACTTTTCTGTTTGTTC  250

seq1  CTCAGAAGATTTTAAGTTATCTGGGGAGGGGGATGTATGGGCATATGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAGATTTTAAGTTATCTGGGGAGGGGGATGTATGGGCATATGTAA  300

seq1  CTACATTGGAGGTCAGTCTCCCAGGTTGCTCCTCCACTTTGTTGAGCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTGGAGGTCAGTCTCCCAGGTTGCTCCTCCACTTTGTTGAGCCAG  350

seq1  GCTCTCTCACTGCTCTGGAGCTATCTGAGTAGGTCTGGGGTAGCTGGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTCACTGCTCTGGAGCTATCTGAGTAGGTCTGGGGTAGCTGGCCA  400

seq1  GTAATCCCCAGGATCTGCCTGCCTCCAACTCCCCAATGAAGTTTACATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCCCCAGGATCTGCCTGCCTCCAACTCCCCAATGAAGTTTACATCA  450

seq1  CACCTGACTTTTTTACAGGGCTTTAGGGGATCAGTCTGTGCTTATGTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGACTTTTTTACAGGGCTTTAGGGGATCAGTCTGTGCTTATGTAGG  500

seq1  AAGCAGTTTACAGACTGAGTTTTCTTTCCACTCCTAAGCCTTTAATTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTTTACAGACTGAGTTTTCTTTCCACTCCTAAGCCTTTAATTCCT  550

seq1  TTAGCAGGTTTCAAAGCATGCCTAGCTAACACACTCGGAAAGACCATAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGGTTTCAAAGCATGCCTAGCTAACACACTCGGAAAGACCATAGT  600

seq1  CTTGGCTGATTCTTTGGCTCTCCTCCACCTCACTTGTTTTCCTGATCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTGATTCTTTGGCTCTCCTCCACCTCACTTGTTTTCCTGATCCAG  650

seq1  GCACACAACCTCCTGTGCTGACATAGTTTCTTCATTTTGCTCTTCCAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAACCTCCTGTGCTGACATAGTTTCTTCATTTTGCTCTTCCAGTG  700

seq1  CCCATGACCGAAAAAGCCGTTGAACTTAGGGCTGAATAAATACAGTATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGACCGAAAAAGCCGTTGAACTTAGGGCTGAATAAATACAGTATGC  750

seq1  ATAGGGCTTGCCAAAACAGATTCCCTTTTTTAATCTGACTTTTTTTTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGCTTGCCAAAACAGATTCCCTTTTTTAATCTGACTTTTTTTTTTC  800

seq1  TGGTTGCCCTAAGACGTATACTTTCTAGAAAATTCCCAGATAATGCTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGCCCTAAGACGTATACTTTCTAGAAAATTCCCAGATAATGCTGGT  850

seq1  ATTGCTGGTTCAGAGACCTTCTCTGAGGACTACTCACTTCATTTTGACT-  899
      |||||||| |||||||||||||||||||||||||||||||||||||||| 
seq2  ATTGCTGGGTCAGAGACCTTCTCTGAGGACTACTCACTTCATTTTGACTC  900

seq1  CTGAATGAATCCAGGGTCTCTAATGGGCTGAAAAGAAAACAGGTGTGCAG  949
      ||||||||||||| |||||||||||||||| |||||||||||||||||||
seq2  CTGAATGAATCCA-GGTCTCTAATGGGCTG-AAAGAAAACAGGTGTGCAG  948

seq1  CCCTCCTCCCAACCAACCAAATCAG-AATCTCAAGATGGGAGGCTCATCT  998
      | || |||||||||||||||||||| |||||| |||||||| ||||||||
seq2  CTCTTCTCCCAACCAACCAAATCAGAAATCTCCAGATGGGA-GCTCATCT  997

seq1  GTTTCCTTAGTAACTTTGATGCTCTAAAGATCAGAGAGGCTTCA-CCTTA  1047
      |||| |||||||||||||||||||  ||||||||||| |||||| |||||
seq2  GTTT-CTTAGTAACTTTGATGCTCCTAAGATCAGAGA-GCTTCACCCTTA  1045

seq1  TCCAGGATTAATGTCTTAGGGTCATTTCCTG  1078
      |||||||||||||||||| ||||  ||||||
seq2  TCCAGGATTAATGTCTTAAGGTCCATTCCTG  1076

seq1: chr7_126687724_126688731
seq2: B6Ng01-159K17.g_69_1079 (reverse)

seq1  GAAG-CCCCAAAAGATAAGACGATGAACA-ATAATAGAAAATGGGAACAT  48
      |||| |||||||||||||| ||||||||| ||||| ||||||||||||||
seq2  GAAGCCCCCAAAAGATAAGCCGATGAACATATAAT-GAAAATGGGAACAT  49

seq1  T-GACCTCTGGCCCTGACATGTATGTGCACATCCATGG-ATATAGGCACT  96
      | | ||||  ||||||||| ||   |||||  |||||| |||||| ||||
seq2  TGGCCCTCGCGCCCTGACAGGTTATTGCACCACCATGGAATATAGCCACT  99

seq1  CCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAGTTGCT  146
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAGTTGCT  149

seq1  GTGAGAAGCTATATTCACATAACAGCTCCCTAAAAGAAACAATCTTCCAA  196
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTGAGAAGCTATATTCACAAAACAGCTCCCTAAAAGAAACAATCTTCCAA  199

seq1  AACCACCTCCATGCCTCATATCTAACTCTCTGTTCACAAATTGTTGCTCA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCTCCATGCCTCATATCTAACTCTCTGTTCACAAATTGTTGCTCA  249

seq1  GTCCTTGAGTAGTAAATATCCCAGGGCACAGTGTCAAGAAGCCATGTTCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTGAGTAGTAAATATCCCAGGGCACAGTGTCAAGAAGCCATGTTCT  299

seq1  TCTAGACCCTCAATCAAAAAGGTGTGGCTCTGGATGGACGAGACTAACCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGACCCTCAATCAAAAAGGTGTGGCTCTGGATGGACGAGACTAACCA  349

seq1  CAAAAGGGAGAAGCTAGTGGAGACACAAAGCAATGCCTGTGACTTCTACC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGGAGAAGCTAGTGGAGACACAAAGCAATGCCTGTGACTTCTACC  399

seq1  CAAATCCCAGCATTCCTCCTCACTGGTTAATATGTATTTCTTGAGCACCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCCAGCATTCCTCCTCACTGGTTAATATGTATTTCTTGAGCACCT  449

seq1  GCTCAGAGTTGGAGCCTGTGAAATGATAGCAAGCAAAGTCAACCTGCAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAGTTGGAGCCTGTGAAATGATAGCAAGCAAAGTCAACCTGCAAA  499

seq1  GGTCTGCTAAGGCAATTCCCAGGATGGGTTGGCTCCAACAGCAAAGATCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGCTAAGGCAATTCCCAGGATGGGTTGGCTCCAACAGCAAAGATCT  549

seq1  ATTTCCTTGGTTCTAGGATTAATTGTAACATCAAAGTGCTGGTAAGTCAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTGGTTCTAGGATTAATTGTAACATCAAAGTGCTGGTAAGTCAG  599

seq1  CTTCATCCTGAGGTTTCTCTTCACATTGCAAGTGTTTCCTCTGAAGGAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCCTGAGGTTTCTCTTCACATTGCAAGTGTTTCCTCTGAAGGAAG  649

seq1  ATGAAATATTGTAACTTGTGAGTTGTTTAGGAGCCCACCGCCCTGGCCTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATATTGTAACTTGTGAGTTGTTTAGGAGCCCACCGCCCTGGCCTG  699

seq1  AGACTGAGAACAAAGCAGAACAGCATCCAGGCATGCCAGGGCAGGGCTGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGAGAACAAAGCAGAACAGCATCCAGGCATGCCAGGGCAGGGCTGT  749

seq1  TGTTAAGGCATTCCTAAGAACATCTTGACTGTAAAGATAAAAAGGTATGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGGCATTCCTAAGAACATCTTGACTGTAAAGATAAAAAGGTATGC  799

seq1  AAGGACCAACAGGGCTATATTATCTAAGTCAACACCATCTGGCCAGAACC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCAACAGGGCTATATTATCTAAGTCAACACCATCTGGCCAGAACC  849

seq1  TCCCCTCTGTCTATTGCCCCTTGGCGCTGGGTAAAGACATACATCAACTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCTGTCTATTGCCCCTTGGCGCTGGGTAAAGACATACATCAACTG  899

seq1  GTTGCTATGTGAACAAAGATAAGCCCACAGCCCACAGCAACAAAGTCCTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTATGTGAACAAAGATAAGCCCACAGCCCACAGCAACAAAGTCCTG  949

seq1  ATGTCCTGTGTTCTTTCTGTTAATGTTTGAATAAGCCAATAGTGTGTCGC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTGTGTTCTTTCTGTTAATGTTTGAATAAGCCAATAGTGTGTCGC  999

seq1  TGTGCTGAATTC  1008
      ||||||||||||
seq2  TGTGCTGAATTC  1011