BAC Information

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BAC

Clone NameB6Ng01-160F16
Chromosome7 (Build37)
Map Location 88,148,046 - 88,149,049
singlet/doubletsinglet
Overlap geneZfp592
Upstream geneZfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm, Crtc3, Iqgap1, LOC100042402, Zscan2, Wdr73, Nmb, Sec11a
Downstream geneAlpk3, Slc28a1, EG623286, LOC100043130, Pde8a, EG636544, Rps17, Cpeb1, LOC623355, Ap3b2, BC048679, Fsd2, Whdc1, Homer2, 2610204K14Rik, 3110040N11Rik, Btbd1, Tm6sf1, LOC100043161, Hdgfrp3, Bnc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160F16.bB6Ng01-160F16.g
ACCDH953751DH953752
length923997
definitionDH953751|Mus musculus domesticus DNA, BAC clone: B6Ng01-160F16, 5' end.DH953752|Mus musculus domesticus DNA, BAC clone: B6Ng01-160F16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcatcatgtgtcctttcatgtgattgcttttttaaatatttat
ttattctatgtatgtgagtacactgtagctgtgagccttcatgtggttgt
tgggaattgagtttttaggacctctgctcgctcaggcccaaagattcatt
tattattatatataagtacactgtagctgtcttcagacgtaccagaagag
agcatcagatctcattatgggtggttgtgagccactatatggttgctgag
atttgaactcaggatcttcagaagagcagtcagttctcttaaccgctgag
ccatctcatgtgcttgctttagcagaacatcctctctcctgtgtctgctt
cagctaagtgtttcttcatgagtctgccttcgtctttcacgcctgtgtcc
actttaatgaaacgctccttcacatgtttgccccagcaaaacaccatcca
acacaactgactttccaaagaacccttaaaatttcctcttcaacaatcaa
acaaaatggagggaactgtgactgtacaagggatgtggggaatggagctt
ggttgagggcacccccagagccaggggatgtgactgccgatctcagatag
aaactggagattcatttcctgtggaggtggaagcagtggagggaagactg
catgcgaggaaggaatccaggggagctgatgaactctgtcggacctctct
tcgatgcattccagagtcagggtgacagcacacccaagagaatcggccca
caggtaatcgggggtgaaagtttatggtggactgcttccgtttcgtatgc
aggttgattaagaatctgttcttggggctagccagaatggactcaacagg
tgaaggggcttttcgtgcagtttccaggagccacattggagaatgagtaa
agtaactgcccaaagctgatgtt
gaattccataattttctgctgcttctaccttcaagtgttaggattatagt
ttcgcgaacatggacaggaacagtctgttttgaagtctggcacatagtga
gtgcctaatatagtgaataaggctactactatacttggctagaaactttc
atggctatcagatgttgtagtcccgaggtttttgtttgcttgtttgtttg
ttttgtgagacaaggtttctctttgcagcctggcagtcttggaactagct
ctgtagaccaggctgacctcaaactcacagatccacctgcctctgacttt
caaattctgggattaaaggtgtgccccagcactgcctcaccatcccaggc
ttttttttttttttttggtttttcgagacagggtttttctttatagccct
ggctgtcctggagctcactttgtagaccaggctggcctcaaactcagaaa
tccacctgcctctgcctcccgagtgctgggattaaaggcgtgtgccacca
cgcctggctatcatcctaggcttttaagccacctttttttctgataccag
gcccatctggtactctattatctgggtgaaagggtaaagtgtatttgata
tggatatgaaggcttttgaatagaggtggaatttgattattttccctacc
ccactccccctttaataaattttcagttaaaaggatttgagaattattta
aggagaaaacagatctctcataaaatataggctgtatcatcccttgcccc
agtcccaggggctggaggttggttcagtggttaaaagtgcttattggctc
ttgcagaggaccaacacctgtggtggggtggctcacaaacacttattact
ccttctccagaccatatgataccttttctgcctcttcaggtacacatgtg
cacctaccttcaacagacacttaacatacacataattaaaatctattaat
gttataagcaatgtcttgcaggacctttcttcatctacctctgttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_88148046_88149049
seq2: B6Ng01-160F16.g_69_1065

seq1  GAATTCCATAATTTTCTGCTGCTTCTACCTTCAAGTGTTAGGATTATAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAATTTTCTGCTGCTTCTACCTTCAAGTGTTAGGATTATAGT  50

seq1  TTCGCGAACATGGACAGGAACAGTCTGTTTTGAAGTCTGGCACATAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCGAACATGGACAGGAACAGTCTGTTTTGAAGTCTGGCACATAGTGA  100

seq1  GTGCCTAATATAGTGAATAAGGCTACTACTATACTTGGCTAGAAACTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTAATATAGTGAATAAGGCTACTACTATACTTGGCTAGAAACTTTC  150

seq1  ATGGCTATCAGATGTTGTAGTCCCGAGGTTTTTGTTTGCTTGTTTGTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTATCAGATGTTGTAGTCCCGAGGTTTTTGTTTGCTTGTTTGTTTG  200

seq1  TTTTGTGAGACAAGGTTTCTCTTTGCAGCCTGGCAGTCTTGGAACTAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGAGACAAGGTTTCTCTTTGCAGCCTGGCAGTCTTGGAACTAGCT  250

seq1  CTGTAGACCAGGCTGACCTCAAACTCACAGATCCACCTGCCTCTGACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGACCAGGCTGACCTCAAACTCACAGATCCACCTGCCTCTGACTTT  300

seq1  CAAATTCTGGGATTAAAGGTGTGCCCCAGCACTGCCTCACCATCCCAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCTGGGATTAAAGGTGTGCCCCAGCACTGCCTCACCATCCCAGGC  350

seq1  TTTTTTTTTTTTTTTTGGTTTTTCGAGACAGGGTTTTTCTTTATAGCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTGGTTTTTCGAGACAGGGTTTTTCTTTATAGCCCT  400

seq1  GGCTGTCCTGGAGCTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCCTGGAGCTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAA  450

seq1  TCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGTGCCACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGTGCCACCA  500

seq1  CGCCTGGCTATCATCCTAGGCTTTTAAGCCACCTTTTTTTCTGATACCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTGGCTATCATCCTAGGCTTTTAAGCCACCTTTTTTTCTGATACCAG  550

seq1  GCCCATCTGGTACTCTATTATCTGGGTGAAAGGGTAAAGTGTATTTGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATCTGGTACTCTATTATCTGGGTGAAAGGGTAAAGTGTATTTGATA  600

seq1  TGGATATGAAGGCTTTTGAATAGAGGTGGAATTTGATTATTTT-CCTACC  649
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGGATATGAAGGCTTTTGAATAGAGGTGGAATTTGATTATTTTCCCTACC  650

seq1  CCACTCCCCCTTTAATAAATTTTCAGTTAAAAGGATTTGAGAATTATTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCCCCTTTAATAAATTTTCAGTTAAAAGGATTTGAGAATTATTTA  700

seq1  AGGAGAAAACAGATCTCTCATAAAATATAGGCTGTATCATCCCTTGCCCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAAACAGATCTCTCATAAAATATAGGCTGTATCATCCCTTGCCCC  750

seq1  AAGTCCCAGGGGCTGGAGGTTGGTTCAGTGGTTAAGAGTGCTTATT-GCT  798
       |||||||||||||||||||||||||||||||||| |||||||||| |||
seq2  -AGTCCCAGGGGCTGGAGGTTGGTTCAGTGGTTAAAAGTGCTTATTGGCT  799

seq1  CTTGCAGAGGACCAGCACCTGTGGT-GGGTGGCTCACAAACACTTATAAC  847
      |||||||||||||| |||||||||| ||||||||||||||||||||| ||
seq2  CTTGCAGAGGACCAACACCTGTGGTGGGGTGGCTCACAAACACTTATTAC  849

seq1  TCCATCTCCAGACCATATGATACCTTTTCTGGCTTCCTCAGGTACACATG  897
      ||| |||||||||||||||||||||||||| || || |||||||||||||
seq2  TCCTTCTCCAGACCATATGATACCTTTTCT-GCCTCTTCAGGTACACATG  898

seq1  TGCACCTACCTACACACAGACACCTACACATACACATAATTAAAAATCAA  947
      ||||||||||| || |||||||| || |||||||||||||| ||||||  
seq2  TGCACCTACCTTCA-ACAGACACTTA-ACATACACATAATT-AAAATC-T  944

seq1  ATAAATGTTAAAAGCAGAAGTCTTTGCAGTGACCTTTCTTCATCTACCTC  997
      || ||||||| ||||| | ||| |||||| ||||||||||||||||||| 
seq2  ATTAATGTTATAAGCA-ATGTC-TTGCAG-GACCTTTCTTCATCTACCT-  990

seq1  CTGTTTA  1004
      |||||||
seq2  CTGTTTA  997