BAC Information

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BAC

Clone NameB6Ng01-160G03
Chromosome7 (Build37)
Map Location 137,279,652 - 137,440,831
singlet/doubletdoublet
Overlap geneFgfr2
Upstream geneLOC100043144, Ppapdc1a, Brwd2, LOC100043150
Downstream geneLOC546005, Ate1, LOC100043163, Nsmce4a, Tacc2, LOC619876, Btbd16, EG434249, Plekha1, Htra1, Dmbt1, 4933402N03Rik, 5430419D17Rik, LOC546006, LOC100043173
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160G03.bB6Ng01-160G03.g
ACCDH953769DH953770
length1,187591
definitionDH953769|Mus musculus domesticus DNA, BAC clone: B6Ng01-160G03, 5' end.DH953770|Mus musculus domesticus DNA, BAC clone: B6Ng01-160G03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,439,643 - 137,440,831)(137,279,652 - 137,280,242)
sequence
gaattcagacacacatacatacacagagagaaaaacacacacatacacac
acacactcacacacacaccctaaacaaacaaaaatggatactgaagagat
gagtcagcaggtaagagcactgattgctcttccagaggatcagagttccc
agcacccacttggagcagcttacaactgtagaagctccagctccaggcat
ccaatgctctcttctggcctttgcgggtacccttctctcaagcagaaaca
cgtatacacataaataacattaaaatattctaaaaacaaataggtaaagc
aaaacttttaagaaaaactataaacttatataaaataagattgcgtaaca
aatctgcacatgcacacatcaactgtgttgagtaactacagcgagcacgt
ggacttcttagtttggttttcttccttattgtcgttgcttcctagagttt
ttaatgtgggtgccacaccatctcacctgtgagcgccgcagcaagtccac
gtaacacgtaaggaccgttccttatttatgtgaccacaatgccatcttca
cggtccccggagccattccttgttatcccttgatgcttggagggtgtcca
gttttcaggttgcctctaccaatgtccttttatagtcaatatgttcacat
cagggaacaaccatcaatctctggattgagtggacgatttttagtctttt
agaatagtctctcgctttctttttttgcgccaaattatttgcaaaaattt
tttcactttatgaatttttaattttcatcttggtggtgtgatttcacaca
ttccccagctctttgtgcttcctttatgtgtttatggatgtgggcatgca
tatataatttttttccaagataaagtcttaccaatgaagcccaagactag
ccttgaactcaggattcatctgcctcaccctctatgtactgagaacacag
ttgtagacttttacactcaactctgcttcttgaaactggagagggaacta
gagagtggcttagacttaggagtcctccattggtaccctctttgctgccc
atctctctgctgtgactccattttctaatgaggtgcagatggctctgtgg
gcagcctgaatcaggtagccagcctctgcttcagctgcttttctttggga
aggtgaacagaacctctaatctcactgtcctatattt
gaattcctaatcacaggaacacacacacacacacacacacacacacacac
acgtagcctggacaagaagagctggggcaccctctagatcctcactgaga
atataagaagccacgggaagtgacatccattgttcttgtttcatcttggc
ctagaccccagccccgtgctgctgctgaagatgggcaaagcaatatgccc
tcattgaacaaagccaactgtcattcaagagtcctctagaaattagtcac
acccccaggaagctagcaccacaaccctagctttcaccaaggcagcccct
gggatgctaaggttgatgggagaaacactgtgtgtcaggagaatggtgtg
taagtggaaccaggtttcagagtggaacagtttgcagtgtggcagcccac
tcagaacactggtctggaagtttgcattgaccctcaagccacacagaatc
cctgatcatgcatgacccagcttgaccttagccttgggggtttcatttta
ttttattttttatttattttatttttatttttttttagtataatgttttc
caggaccttttgtttcattttgctttttatccacggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_137439643_137440831
seq2: B6Ng01-160G03.b_48_1234 (reverse)

seq1  AAATATAGG-CAGTAGGATTAGGAGGTCTGTGTCACCTTCCCAAGG--AA  47
      ||||||||| ||||  ||||||  | ||||| |||||||||||| |  ||
seq2  AAATATAGGACAGTGAGATTAGAGGTTCTGT-TCACCTTCCCAAAGAAAA  49

seq1  GCAGCTGAAGCAGAGGCTGAGCTAACCTGA-TCAGGCTGCCCACAGAGCC  96
      ||||||||||||||||||| ||| |||||| |||||||||||||||||||
seq2  GCAGCTGAAGCAGAGGCTG-GCT-ACCTGATTCAGGCTGCCCACAGAGCC  97

seq1  ATCTGCACATCATTAG-AAATGGAGTCACCAGGCAGGAGAGATGGGCAGC  145
      |||||||| ||||||| ||||||||||||   ||| ||||||||||||||
seq2  ATCTGCACCTCATTAGAAAATGGAGTCAC--AGCA-GAGAGATGGGCAGC  144

seq1  -AAGAGTGTTACCAATGGAGGACT-CTAAGTCTAAGCCACTCTCTAGTTC  193
       ||||| | ||||||||||||||| |||||||||||||||||||||||||
seq2  AAAGAG-GGTACCAATGGAGGACTCCTAAGTCTAAGCCACTCTCTAGTTC  193

seq1  CCTCTCCAGTTTCAAGGAAGCAGAGTTGAGTGTAAAAGTCTACAACTGTG  243
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCTCTCCAGTTTCAA-GAAGCAGAGTTGAGTGTAAAAGTCTACAACTGTG  242

seq1  TTCTCAGTACATAGAGGGTGGAGGCAGATGAATCCTGAGTTCAAGGCTAG  293
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTCTCAGTACATAGAGGGT-GAGGCAGATGAATCCTGAGTTCAAGGCTAG  291

seq1  TCTTGGGCTTCATTGGTAAGACTTTATCTTGGAAAAAAATTATATATGCA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGCTTCATTGGTAAGACTTTATCTTGGAAAAAAATTATATATGCA  341

seq1  TGCCCACATCCATAAACACATAAAGGAAGCACAAAGAGCTGGGGAATGTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACATCCATAAACACATAAAGGAAGCACAAAGAGCTGGGGAATGTG  391

seq1  TGAAATCACACCACCAAGATGAAAATTAAAAATTCATAAAGTGAAAAAAT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCACACCACCAAGATGAAAATTAAAAATTCATAAAGTGAAAAAAT  441

seq1  TTTTGCAAATAATTTGGCGCAAAAAAAGAAAGCGAGAGACTATTCTAAAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCAAATAATTTGGCGCAAAAAAAGAAAGCGAGAGACTATTCTAAAA  491

seq1  GACTAAAAATCGTCCACTCAATCCAGAGATTGATGGTTGTTCCCTGATGT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAAAATCGTCCACTCAATCCAGAGATTGATGGTTGTTCCCTGATGT  541

seq1  GAACATATTGACTATAAAAGGACATTGGTAGAGGCAACCTGAAAACTGGA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATATTGACTATAAAAGGACATTGGTAGAGGCAACCTGAAAACTGGA  591

seq1  CACCCTCCAAGCATCAAGGGATAACAAGGAATGGCTCCGGGGACCGTGAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCCAAGCATCAAGGGATAACAAGGAATGGCTCCGGGGACCGTGAA  641

seq1  GATGGCATTGTGGTCACATAAATAAGGAACGGTCCTTACGTGTTACGTGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCATTGTGGTCACATAAATAAGGAACGGTCCTTACGTGTTACGTGG  691

seq1  ACTTGCTGCGGCGCTCACAGGTGAGATGGTGTGGCACCCACATTAAAAAC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTGCGGCGCTCACAGGTGAGATGGTGTGGCACCCACATTAAAAAC  741

seq1  TCTAGGAAGCAACGACAATAAGGAAGAAAACCAAACTAAGAAGTCCACGT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAAGCAACGACAATAAGGAAGAAAACCAAACTAAGAAGTCCACGT  791

seq1  GCTCGCTGTAGTTACTCAACACAGTTGATGTGTGCATGTGCAGATTTGTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGCTGTAGTTACTCAACACAGTTGATGTGTGCATGTGCAGATTTGTT  841

seq1  ACGCAATCTTATTTTATATAAGTTTATAGTTTTTCTTAAAAGTTTTGCTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAATCTTATTTTATATAAGTTTATAGTTTTTCTTAAAAGTTTTGCTT  891

seq1  TACCTATTTGTTTTTAGAATATTTTAATGTTATTTATGTGTATACGTGTT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTATTTGTTTTTAGAATATTTTAATGTTATTTATGTGTATACGTGTT  941

seq1  TCTGCTTGAGAGAAGGGTACCCGCAAAGGCCAGAAGAGAGCATTGGATGC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTGAGAGAAGGGTACCCGCAAAGGCCAGAAGAGAGCATTGGATGC  991

seq1  CTGGAGCTGGAGCTTCTACAGTTGTAAGCTGCTCCAAGTGGGTGCTGGGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCTGGAGCTTCTACAGTTGTAAGCTGCTCCAAGTGGGTGCTGGGA  1041

seq1  ACTCTGATCCTCTGGAAGAGCAATCAGTGCTCTTACCTGCTGACTCATCT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGATCCTCTGGAAGAGCAATCAGTGCTCTTACCTGCTGACTCATCT  1091

seq1  CTTCAGTATCCATTTTTGTTTGTTTAGGGTGTGTGTGTGAGTGTGTGTGT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTATCCATTTTTGTTTGTTTAGGGTGTGTGTGTGAGTGTGTGTGT  1141

seq1  GTATGTGTGTGTTTTTCTCTCTGTGTATGTATGTGTGTCTGAATTC  1189
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGTGTGTTTTTCTCTCTGTGTATGTATGTGTGTCTGAATTC  1187

seq1: chr7_137279652_137280242
seq2: B6Ng01-160G03.g_70_660

seq1  GAATTCCTAATCACAGGAACACACACACACACACACACACACACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAATCACAGGAACACACACACACACACACACACACACACACAC  50

seq1  ACGTAGCCTGGACAAGAAGAGCTGGGGCACCCTCTAGATCCTCACTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAGCCTGGACAAGAAGAGCTGGGGCACCCTCTAGATCCTCACTGAGA  100

seq1  ATATAAGAAGCCACGGGAAGTGACATCCATTGTTCTTGTTTCATCTTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGAAGCCACGGGAAGTGACATCCATTGTTCTTGTTTCATCTTGGC  150

seq1  CTAGACCCCAGCCCCGTGCTGCTGCTGAAGATGGGCAAAGCAATATGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACCCCAGCCCCGTGCTGCTGCTGAAGATGGGCAAAGCAATATGCCC  200

seq1  TCATTGAACAAAGCCAACTGTCATTCAAGAGTCCTCTAGAAATTAGTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAACAAAGCCAACTGTCATTCAAGAGTCCTCTAGAAATTAGTCAC  250

seq1  ACCCCCAGGAAGCTAGCACCACAACCCTAGCTTTCACCAAGGCAGCCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCAGGAAGCTAGCACCACAACCCTAGCTTTCACCAAGGCAGCCCCT  300

seq1  GGGATGCTAAGGTTGATGGGAGAAACACTGTGTGTCAGGAGAATGGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCTAAGGTTGATGGGAGAAACACTGTGTGTCAGGAGAATGGTGTG  350

seq1  TAAGTGGAACCAGGTTTCAGAGTGGAACAGTTTGCAGTGTGGCAGCCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGGAACCAGGTTTCAGAGTGGAACAGTTTGCAGTGTGGCAGCCCAC  400

seq1  TCAGAACACTGGTCTGGAAGTTTGCATTGACCCTCAAGCCACACAGAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACACTGGTCTGGAAGTTTGCATTGACCCTCAAGCCACACAGAATC  450

seq1  CCTGATCATGCATGACCCAGCTTGACCTTAGCCTTGGGGGTTTCATTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATCATGCATGACCCAGCTTGACCTTAGCCTTGGGGGTTTCATTTTA  500

seq1  TTTTATTTTTTATTTATTTTATTTTTATTTTTTTTTAGTATAATGTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTTTATTTATTTTATTTTTATTTTTTTTTAGTATAATGTTTTC  550

seq1  CAGGACCTTTTGTTTCATTTTGCTTTTTATCCACGGGGGGG  591
      |||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCTTTTGTTTCATTTTGCTTTTTATCCACGGGGGGG  591