BAC Information

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BAC

Clone NameB6Ng01-160H20
Chromosome7 (Build37)
Map Location 62,890,259 - 62,891,369
singlet/doubletsinglet
Overlap genenone
Upstream geneLuzp2, LOC668796
Downstream geneSiglech, Tubgcp5, Cyfip1, Nipa2, Nipa1, LOC672959, Herc2, p
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160H20.bB6Ng01-160H20.g
ACCDH953851DH953852
length1,0871,190
definitionDH953851|Mus musculus domesticus DNA, BAC clone: B6Ng01-160H20, 5' end.DH953852|Mus musculus domesticus DNA, BAC clone: B6Ng01-160H20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctattgaggttgaagttgattgtatatgcttcattacatatcag
cacatagctaatgggatcaattttaattgtatttgtttagctttccttta
agacctttcttttctctttttgcagtaaaggaaattgaacccgtcatatg
gcatcttggttgagtcttctgcctctgcactgcatatccatccctccttt
tatgtgtcttgagatagggtgctgagttggccagactagccttgcaatca
gtctgcagctcaagttggccttcctgccttaattacctgagtagttgcaa
tctacctacaggcctcatccacaagacccaccttaaaacttcttaatgat
cctcctagtgtagacacactaagtataatcagttatgacagctatataag
ttttctcagttttgcacatgaggagaaaggttcagcaaagaattaatgtc
aaatcacagttatggaaagtctcagtgaacctttcaagatactaaaatgg
tttattaatattcccatgtctgtgaagtgtcagacactgtcctaccagct
cagagcataaaaattaataaagttctacatttctagagcttaaattcaca
tgaggaaggcagacttcaaagggagtcagcaagtgaataactactgtacc
cttacaatttatgattactggggctgacaggaggagcagagaggtgtgtg
tgagtgaagcatgcagactttagatgcttacaaaatgtcacccagagggg
caatatttgaacattgcccatgggatgtaaatgataacactttgagagtc
ctatgttcaagttttctgattgagatacttgctgggaaatggacttagca
tctataagaattgtaagatcaatggcacgcagagtgaacaaagggagaag
tgccagaaactgaagtcagagagagggctgactgctttctattataggga
ctgagaatccatgagagagtcaattgttgattggtatcttctttcaagaa
acgatgattattcaaataaaacaaccgatatgattattacatgaagaaac
tttaaagaaagccactaaaatacttagagtctctcat
gaattcacatgaaactgtgaatgaaattcacgagccagttctacaggtgt
ttgaatcaaaaaggcagaagcagctctagcagctttatcaaccaaatcat
tgccctctgctaaaggaccaggcaaacctgtatgagctcgaatgtgttgg
acaaaaaatggagaacctctatttaaagttaaggattgcaatttatttaa
caaattccctatcgtggatcgaaaattcaccttccccatcacttccagca
ctgctaacaaattaaccacatactgactatctgaaattaaattaaaagat
tcagaatacaattcaaaaacttttataacaatctgcaactcaataacttg
gggagaagcagggggaaactgtaaagttactggcgtggagccatggacca
aatatgctccacagcctgtcttagacccatctgtaaatttaaaggggcat
caggcaatggcactcgagaagtaattcgtggaaaaacaactggatgagct
ttaatcagctgcaaaatgggatccttagggaaatgattatccatcttccc
cataaagctacatctcaaaattgcccaatcatcaacagtagctgataata
cttctatttgcttcatattatatggaacaatcaattcctgagggggattg
ccaaaatattgaatacattgttgtaggccaatcaaggccaattgtgctac
cgaggcagggtaataagacaagatttttgcaggtgaaatcttgggatgaa
tccatagcaaagagatgccctgccagaggactccagtaggctgggtctct
gagggcaggatgcacaaaataataggactgaacagatctcttctctttaa
tgctgctgtttgaatacccttttcaaccaaacttaatgctacgcgggcag
gatcagtagctgcagggagattatcctatatctccggtaaatatcatata
tgctgtatgttgtgttagcccaataggacggaataccactgtatatcccc
atagcttgaaatcatcgatgtctcatatccatctgattctgatttctagg
gagaatcttgactatcaaaatttgttctatactcaccattgcgtctgacc
ttctggctcacacatgctttcttaatagatctacatatggttcacgcact
tctctcctgtgttaacgcgagagatattacctctccgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_62890259_62891369
seq2: B6Ng01-160H20.b_45_1131 (reverse)

seq1  ATGA-AGACTCTAAGTATATTTAGTTTGCTATCTTTTTAAAGTTTCCTTC  49
      |||| ||||||||||||| ||||| | ||| ||  |||||||||| ||||
seq2  ATGAGAGACTCTAAGTAT-TTTAG-TGGCTTTC--TTTAAAGTTT-CTTC  45

seq1  ATGTAAATAATTCCATATTCGGGTTTGTTTTATTTGAATAAATTCATCTG  99
      |||| ||||||  |||| ||||  |||||||||||||||||  ||||| |
seq2  ATGT-AATAAT--CATA-TCGG--TTGTTTTATTTGAATAA--TCATC-G  86

seq1  TTTCTTGAAAAAGAAAAAAATACAAAAATCAAACAATTGACTTCTCTTCA  149
      ||||||||     || || ||||   |||| |||||||||| |||| |||
seq2  TTTCTTGA-----AAGAAGATAC--CAATC-AACAATTGAC-TCTC-TCA  126

seq1  TGGAATTTCTCAGTCCCTATAATAGAAAGCAGTCAGCCCTCTCTTCTGAC  199
      ||||  ||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGGA--TTCTCAGTCCCTATAATAGAAAGCAGTCAGCCCTCTC-TCTGAC  173

seq1  TTCAGTTTCTGGCACTTCTCCCTTTGTTCACTCTGCGTGCCATTGATCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTCTGGCACTTCTCCCTTTGTTCACTCTGCGTGCCATTGATCTT  223

seq1  ACAATTCTTATAGATGCTAAGTCCATTT-CCAGCAAGTATCTCAATCAGA  298
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACAATTCTTATAGATGCTAAGTCCATTTCCCAGCAAGTATCTCAATCAGA  273

seq1  AAACCTGAACATAGGACTCTCAAAGTGTTATCATTTACATCCCATGGGCA  348
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGAACATAGGACTCTCAAAGTGTTATCATTTACATCCCATGGGCA  323

seq1  ATGTTCAAATATTGCCCCTCTGGGTGACATTTTGTAAGCATCTAAAGTCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAAATATTGCCCCTCTGGGTGACATTTTGTAAGCATCTAAAGTCT  373

seq1  GCATGCTTCACTCACACACACCTCTCTGCTCCTCCTGTCAG-CCCAGTAA  447
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCATGCTTCACTCACACACACCTCTCTGCTCCTCCTGTCAGCCCCAGTAA  423

seq1  TCATAAATTGTAAGGGTACAGTAGTTATTCACTTGCTGACTCCCTTTGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAATTGTAAGGGTACAGTAGTTATTCACTTGCTGACTCCCTTTGAA  473

seq1  GTCTGCCTTCCTCATGTGAATTTAAGCTCTAGAAATGTAGAACTTTATTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCCTTCCTCATGTGAATTTAAGCTCTAGAAATGTAGAACTTTATTA  523

seq1  ATTTTTATGCTCTGAGCTGGTAGGACAGTGTCTGACACTTCACAGACATG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATGCTCTGAGCTGGTAGGACAGTGTCTGACACTTCACAGACATG  573

seq1  GGAATATTAATAAACCATTTTAGTATCTTGAAAGGTTCACTGAGACTTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATTAATAAACCATTTTAGTATCTTGAAAGGTTCACTGAGACTTTC  623

seq1  CATAACTGTGATTTGACATTAATTCTTTGCTGAACCTTTCTCCTCATGTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTGTGATTTGACATTAATTCTTTGCTGAACCTTTCTCCTCATGTG  673

seq1  CAAAACTGAGAAAACTTATATAGCTGTCATAACTGATTATACTTAGTGTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTGAGAAAACTTATATAGCTGTCATAACTGATTATACTTAGTGTG  723

seq1  TCTACACTAGGAGGATCATTAAGAAGTTTTAAGGTGGGTCTTGTGGATGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACTAGGAGGATCATTAAGAAGTTTTAAGGTGGGTCTTGTGGATGA  773

seq1  GGCCTGTAGGTAGATTGCAACTACTCAGGTAATTAAGGCAGGAAGGCCAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTAGGTAGATTGCAACTACTCAGGTAATTAAGGCAGGAAGGCCAA  823

seq1  CTTGAGCTGCAGACTGATTGCAAGGCTAGTCTGGCCAACTCAGCACCCTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGCTGCAGACTGATTGCAAGGCTAGTCTGGCCAACTCAGCACCCTA  873

seq1  TCTCAAGACACATAAAAGGAGGGATGGATATGCAGTGCAGAGGCAGAAGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGACACATAAAAGGAGGGATGGATATGCAGTGCAGAGGCAGAAGA  923

seq1  CTCAACCAAGATGCCATATGACGGGTTCAATTTCCTTTACTGCAAAAAGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCAAGATGCCATATGACGGGTTCAATTTCCTTTACTGCAAAAAGA  973

seq1  GAAAAGAAAGGTCTTAAAGGAAAGCTAAACAAATACAATTAAAATTGATC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAAGGTCTTAAAGGAAAGCTAAACAAATACAATTAAAATTGATC  1023

seq1  CCATTAGCTATGTGCTGATATGTAATGAAGCATATACAATCAACTTCAAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAGCTATGTGCTGATATGTAATGAAGCATATACAATCAACTTCAAC  1073

seq1  CTCAATAGGAATTC  1111
      ||||||||||||||
seq2  CTCAATAGGAATTC  1087