BAC Information

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BAC

Clone NameB6Ng01-161B21
Chromosome7 (Build37)
Map Location 50,216,324 - 50,217,116
singlet/doubletsinglet
Overlap genenone
Upstream geneGprc2a-rs1, EG628444, EG434174, EG637913, EG434175, LOC100039556, EG637898, Gprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668
Downstream geneLOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161B21.bB6Ng01-161B21.g
ACCDH954319DH954320
length9261,156
definitionDH954319|Mus musculus domesticus DNA, BAC clone: B6Ng01-161B21, 5' end.DH954320|Mus musculus domesticus DNA, BAC clone: B6Ng01-161B21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgactgagttccccagtcattatgacctcttaggactaatttac
aaagatcgactctcaggatgggtcatgggatagaaccctcaatcttggag
gaggcattagctatgtcacctgcctcgttaatgattagccaggtgtaatt
ataaagtcgataaggatttttcttagcttggcctaccactggcttctcat
caggcaaagacacagccaaatctcgatgatcaggagtgacttttttctcg
tcgctttcattttttgtaaagaagcacatttagaaacttcctcggggttt
ttcttccatggacaattataaggttttattaggtgctcagggagccatct
agcatgttgtgcttttgaatcgtagatgcaagcgtgtcctttgccccata
tgaggactgggtctggacccttccatttgttggacaaggggtctcccaca
tagcttgtgcatagttattagcagtagaaggatgccagaggcgatctgca
gcagacttgcctgcattgtcgtacgtcagaaagtttaaaacaaataatgc
atgatttaaaaccatcttggagttaccagactgaagatatagaattttcc
ccccagactgtaatttgaaaagcatgtttttaagggtttgatgagttctt
tttacaataccttgaccttggggattatagggaatcccagtaatgtgttt
aatgcccatttgggcataaaactgtttaaagctggcacttgcatatcctg
ggccattgtctgtcttgaggatcttaggctgtggcacagtcgccaagcag
gagagaacatggctgataacatgtttagtagcctctcctgtttgtaaaga
tgcacagataaatccactaaagatatcacagagacatgatatattttact
ttccaaagggagtgtatgggtacatc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgcttgcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggataaagaaaatatggtacatctatataatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcaaaaa
ggaactcacacaatatttactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaaggagttacagagacaaagattggagctgtgacg
aaaggatggaccatgtagagagtaccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcataaactagcaagattttatcgaa
aggacccagatgtagctgtctcttgtgagactatgccggggccctagcaa
acacataagtggatgctcacagtcagctattggatgatcacagggctccc
atgaggagctagagaaagtacccagagctatggatctgcaccctatagtg
acacatatgactaccagtacctgagcttctgactctagctgcatatgtat
caaaagatggctagtccgcattcactgaagagaggtccatggaacgctac
cttatatgtccagtacagggaacgtcggcccatagggaattgtgggttat
ggaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_50216324_50217116
seq2: B6Ng01-161B21.b_43_835

seq1  GAATTCTGACTGAGTTCCCCAGTCATTATGACCTCTTAGGACTAATTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACTGAGTTCCCCAGTCATTATGACCTCTTAGGACTAATTTAC  50

seq1  AAAGATCGACTCTCAGGATGGGTCATGGGATAGAACCCTCAATCTTGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCGACTCTCAGGATGGGTCATGGGATAGAACCCTCAATCTTGGAG  100

seq1  GAGGCATTAGCTATGTCACCTGCCTCGTTAATGATTAGCCAGGTGTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATTAGCTATGTCACCTGCCTCGTTAATGATTAGCCAGGTGTAATT  150

seq1  ATAAAGTCGATAAGGATTTTTCTTAGCTTGGCCTACCACTGGCTTCTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTCGATAAGGATTTTTCTTAGCTTGGCCTACCACTGGCTTCTCAT  200

seq1  CAGGCAAAGACACAGCCAAATCTCGATGATCAGGAGTGACTTTTTTCTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAAAGACACAGCCAAATCTCGATGATCAGGAGTGACTTTTTTCTCG  250

seq1  TCGCTTTCATTTTTTGTAAAGAAGCACATTTAGAAACTTCCTCGGGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTTTCATTTTTTGTAAAGAAGCACATTTAGAAACTTCCTCGGGGTTT  300

seq1  TTCTTCCATGGACAATTATAAGGTTTTATTAGGTGCTCAGGGAGCCATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCATGGACAATTATAAGGTTTTATTAGGTGCTCAGGGAGCCATCT  350

seq1  AGCATGTTGTGCTTTTGAATCGTAGATGCAAGCGTGTCCTTTGCCCCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTTGTGCTTTTGAATCGTAGATGCAAGCGTGTCCTTTGCCCCATA  400

seq1  TGAGGACTGGGTCTGGACCCTTCCATTTGTTGGACAAGGGGTCTCCCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGACTGGGTCTGGACCCTTCCATTTGTTGGACAAGGGGTCTCCCACA  450

seq1  TAGCTTGTGCATAGTTATTAGCAGTAGAAGGATGCCAGAGGCGATCTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGTGCATAGTTATTAGCAGTAGAAGGATGCCAGAGGCGATCTGCA  500

seq1  GCAGACTTGCCTGCATTGTCGTACGTCAGAAAGTTTAAAACAAATAATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACTTGCCTGCATTGTCGTACGTCAGAAAGTTTAAAACAAATAATGC  550

seq1  ATGATTTAAAACCATCTTGGAGTTACCAGACTGAAGATATAGAATTTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTAAAACCATCTTGGAGTTACCAGACTGAAGATATAGAATTTTCC  600

seq1  CCCCAGACTGTAATTTGAAAAGCATGTTTTTAAGGGTTTGATGAGTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGACTGTAATTTGAAAAGCATGTTTTTAAGGGTTTGATGAGTTCTT  650

seq1  TTTACAATACCTTGACCTTGGGGATTATAGGGAATCCCAGTAATGTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATACCTTGACCTTGGGGATTATAGGGAATCCCAGTAATGTGTTT  700

seq1  AATGCCCATTTGGGCATAAAACTGTTTAAAGCTGGCACTTGCATATCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCCATTTGGGCATAAAACTGTTTAAAGCTGGCACTTGCATATCCTG  750

seq1  GGCCATTGTCTGTCTTGAGGATCTTAGGCTGTGGCACAGTCGC  793
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATTGTCTGTCTTGAGGATCTTAGGCTGTGGCACAGTCGC  793