BAC Information

Click to search

BAC

Clone NameB6Ng01-161M13
Chromosome7 (Build37)
Map Location 61,182,349 - 61,183,308
singlet/doubletsinglet
Overlap genenone
Upstream geneGm1865, LOC100040718, LOC668789
Downstream geneMrps33p, LOC622146, Luzp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161M13.bB6Ng01-161M13.g
ACCDH954801DH954802
length9531,158
definitionDH954801|Mus musculus domesticus DNA, BAC clone: B6Ng01-161M13, 5' end.DH954802|Mus musculus domesticus DNA, BAC clone: B6Ng01-161M13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctagaatacagagtaagttctaggccaacctgggcaacttagta
taagcctacctcaaactataaagtgacaagaggacttgggatgtgactta
gtgtcagagcttcaggctagcagtactccattcggtctcaagtacaggaa
aaaacctcatactcatacttagaatgagggggtaattttcatttgagtct
ataaggtcaaagttcttgttttcgtctagaactgttttaaagctctctct
ctctctctctctctctctctctctctctctctctctgtcacacacacaca
cacacacacacacacacacacacacacacacacattactttgtgcctgac
aagcaggctctttatttgttcctgaagaatacccatcatctgtctttgga
gactttgatgtacaggagagttcattttcctaattttctcatacttatct
tgttcttgtcatggttatgtcaacatataaatgtttaggttcatccctgc
taaaaaatctaacagctcacgattgcaacttcattacctcatttgatttt
ttttttcattatttaaagttctttgtgaatttaaattcaatgaactgcat
ttgcgactaaatatgtgctattttggaaaaatatttgtgctaaataataa
tgaaaaacagaagaaaattgtgtgaaaagggagaccttggagaaatagat
gcaattattagaatgaaatttgcccataagagtttttggttgcactgaca
gtcatccccatgactgaaggagagtcaatgggcttgtgatttttgaattt
ttacctcacagattttctggaacgtggtacatcctgtgtgttgtgggctt
tacactacactaatcgtggctctcctttttactctggtagatactagtct
acttatttccttttctagggttttcagtgcaataaagaggattaataata
acc
gaattctcacctgaggtatattgaatgcctgagaagcacctaaaaaaatg
ttcaacatccttaatcatcaaagaaatgcatataaaaacaaccctgagat
tccacctcacaccagtcagaatgcctaagatcaaaaattcaggtgacagc
agaagctggtgaggatgtggagaaagaggtacactcctccattgttggtg
ggattgcaagctgttaaaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactacctgaggatcctacaatacctctcctgtgc
atatatacagaagatgttccaactagtaagaaagacacatactccactag
gttcataacagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaaggaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcacacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagataaaatttgctaaacacatgaaactcaa
gaagaacaatgaccaaagtgtgggcactttgccccttcttagaattggga
acaaaacacccatggaaggagttacagagacacagtttggagctgagacg
aaaggatggatcatcttgatatggccatatccggggatccatcccataat
cagcttccaaacgctgacacctttgcccacactagcaagatttgctggaa
ggacccagatagagctgtctcttgtgagactatgccagggcctagcaaac
acataagtggatgctcacagtcagctatgatggatcacaggagcccaatg
gagagctagagaagtacccagagtgggggatctgcacctataggtgaaca
acattatgactaccagtactcccagagctcgtgtctctagctgcataata
tcagaagatgctagtcgccatcagtggaaaagagtcatgtattgcaactt
tatctgtctaatacatggaacgctccagtcatagatggagtggatgttcg
tcgcaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_61182349_61183308
seq2: B6Ng01-161M13.b_44_995 (reverse)

seq1  GTTATTATTAATCCTCTTTTATGCACTGGAATACCTAGAAAAGGGAAATA  50
      |||||||||||||||||||  ||||||| ||  ||||||||| |||||||
seq2  GTTATTATTAATCCTCTTTATTGCACTGAAAACCCTAGAAAA-GGAAATA  49

seq1  AGTAGACTAAGTATCTTACAAGAGTAAAAAAGAAGAACCACGATTAGTGT  100
      |||||||| |||||| ||| ||||| |||||| ||| |||||||||||||
seq2  AGTAGACT-AGTATC-TACCAGAGT-AAAAAGGAGAGCCACGATTAGTGT  96

seq1  AGTGTCAAAGCCCACAACACCACAGGATGTACCACCTTCCAGAAACTCTG  150
      ||||| ||||||||||||| ||||||||||||||| ||||||||| ||||
seq2  AGTGT-AAAGCCCACAACA-CACAGGATGTACCACGTTCCAGAAAATCTG  144

seq1  TGAGGTAAAAATTCAAAAATCACAAGCCCATTGACTCTCCTTCAGTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTAAAAATTCAAAAATCACAAGCCCATTGACTCTCCTTCAGTCATG  194

seq1  GGGATGACTGTTCAGTGCAACCAAAAACTCTTATGGGCAAATTTCATTCC  250
      |||||||||| ||||||||||||||||||||||||||||||||||||| |
seq2  GGGATGACTG-TCAGTGCAACCAAAAACTCTTATGGGCAAATTTCATT-C  242

seq1  TAATAATTGCATCTATTTCTCCAAGGTCTCCCTTTTCACACAATTTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTGCATCTATTTCTCCAAGGTCTCCCTTTTCACACAATTTTCTT  292

seq1  CTGTTTTTCATTATTATTTAGCACAAATATTTTTCC-AAATAGCACATAT  349
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTGTTTTTCATTATTATTTAGCACAAATATTTTTCCAAAATAGCACATAT  342

seq1  TTAGTCGCAAATGCAGTTCATTGAATTTAAATTCACAAAGAACTTTAAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCGCAAATGCAGTTCATTGAATTTAAATTCACAAAGAACTTTAAAT  392

seq1  AATG-AAAAAAAAATCAAATGAGGTAATGAAGTTGCAATCGTGAGCTGTT  448
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAAAAAAAATCAAATGAGGTAATGAAGTTGCAATCGTGAGCTGTT  442

seq1  AGATTTTTTAGCAGGGATGAACCTAAACATTTATATGTTGACATAACCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTTAGCAGGGATGAACCTAAACATTTATATGTTGACATAACCAT  492

seq1  GACAAGAACAAGATAAGTATGAGAAAATTAGGAAAATGAACTCTCCTGTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGAACAAGATAAGTATGAGAAAATTAGGAAAATGAACTCTCCTGTA  542

seq1  CATCAAAGTCTCCAAAGACAGATGATGGGTATTCTTCAGGAACAAATAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAAGTCTCCAAAGACAGATGATGGGTATTCTTCAGGAACAAATAAA  592

seq1  GAGCCTGCTTGTCAGGCACAAAGTAATGTGTGTGTGTGTGTGTGTGTGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGCTTGTCAGGCACAAAGTAATGTGTGTGTGTGTGTGTGTGTGTG  642

seq1  TGTGTGTGTGTGTGTGTGTGTGACAGAGAGAGAGAGAGAGAGAGAGAGAG  698
      ||||||||||||||||||||||||  ||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGAC--AGAGAGAGAGAGAGAGAGAGAGAG  690

seq1  AGAGAGAGAGAGAGAGAGAGCTTTAAAACAGTTCTAGACGAAAACAAGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGCTTTAAAACAGTTCTAGACGAAAACAAGAA  740

seq1  CTTTGACCTTATAGACTCAAATGAAAATTACCCCCTCATTCTAAGTATGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACCTTATAGACTCAAATGAAAATTACCCCCTCATTCTAAGTATGA  790

seq1  GTATGAGGTTTTTTCCTGTACTTGAGACCGAATGGAGTACTGCTAGCCTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGGTTTTTTCCTGTACTTGAGACCGAATGGAGTACTGCTAGCCTG  840

seq1  AAGCTCTGACACTAAGTCACATCCCAAGTCCTCTTGTCACTTTATAGTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTGACACTAAGTCACATCCCAAGTCCTCTTGTCACTTTATAGTTT  890

seq1  GAGGTAGGCTTATACTAAGTTGCCCAGGTTGGCCTAGAACTTACTCTGTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGGCTTATACTAAGTTGCCCAGGTTGGCCTAGAACTTACTCTGTA  940

seq1  TTCTAGGAATTC  960
      ||||||||||||
seq2  TTCTAGGAATTC  952