BAC Information

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BAC

Clone NameB6Ng01-162K18
Chromosome7 (Build37)
Map Location 37,384,075 - 37,542,077
singlet/doubletdoublet
Overlap geneTshz3
Upstream geneAnkrd27, Pdcd5, Dpy19l3, zfp507, LOC100043872, EG668988, LOC668507
Downstream geneLOC100043874, Zfp536
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162K18.bB6Ng01-162K18.g
ACCDH955453DH955454
length1,243915
definitionDH955453|Mus musculus domesticus DNA, BAC clone: B6Ng01-162K18, 5' end.DH955454|Mus musculus domesticus DNA, BAC clone: B6Ng01-162K18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,540,857 - 37,542,077)(37,384,075 - 37,384,989)
sequence
gaattctctctcttggaagagaagcagggtggactttcgtggaagtttgc
acttcccctgagcagagtcatgattctgtgtcccccacaattgcagttgg
cacatgggagcctgtagaggtaaagcagagtgcatttgtaacttgtggtc
ttcagtaaggcagctcgactgtctacacacttgacagactgaactctcga
gagaagcacaacggataactgagcaatggctccgggaattgggggggtcc
agtccttgaaatgggcactttcaaactggccttatgtatacaactcagtt
ctcactgggactcactgactcttccccctaacatctaaagagttgtgtct
attaaaaaaaaaaaagaggaatggatggcttgagtcaagcaggaattaag
atttacatggaaaataaggcaatcgatgtatgcaagattatttatctatt
cacacattcactagcccattcctccatctgcactcatttattcactcatt
cacctataatccatctatcaactcattatctgttgatcctatttatctac
ccattggtccatccatccatctatccatctatccatccatccacccaaca
tacaatggacacaattaaatattgcaaatgcttggattagagataagaac
ctacaaatggtgacaaaaaaatgaatgagtcagaatcacagccttcattt
ctttacaccatcaagatggcctttgttacaccgagtacagggccattaag
gagtctgtgatcagcaaaaatgtcttagcttgacattcagagcctcatat
aatcaagctccctgttacctttttagggtttttctttttttcctagggct
ggcatacagagtcgtgtgcattactagacaggtgctctaccattgagcca
cctactcagccccttattggggggattctaggcagatgcttagctgtagc
accaatatctttcagtgtttctcttctactgccccagtccacaaactcat
gctacactcctcataatgtcgtctggccttgacttacgctgtatcttcct
gtttaacatggactattgatcctttcatgtcctcctacctgcctaactgg
ctcaaaagattcaatcattcacagcccccatatctgaatgggacctcctt
aaatctaggtatgaccaattggaggggagccttcctctacacctctaaac
tctgggtgaaatgggggctagattaatactgcccacaatttat
gaattctctctccattcagctctgcctggcgcctctctgaagatttattg
gcataacagactctgcttatttcttaccatctctgaaagtgctcttattc
tcagagaggagggaccacatcttcctatctgtgcttttcctgtctgctcc
ctagagcatctgtctgtatgtctcttcactgtaacaaaatacccaactga
acagttcaaggaagacaggcttcattttgactctgtttaggggactcgag
gactcagtctgtgaacctgactcaggtttcttagcggaatgtcacgacaa
atagagcataagggagaaaaccattgttcacatcttggtggccaggaagt
agagggtgaagtggacagaaagtggctatggataatatacacccaatgac
ccttccctaacgatctacttcctctatcaacctccctcttgtctatgatt
tcggaacctcccaaaatagcactagacgctagagatcaaacatttaaagc
atgagaaatgatggacatttgatgtggctggagagatggctcgattggtg
gttaaggacatttgcagatcttccagagggcccaagtttggtctctagca
cccacactgggtggcccaaggccctgtaactccaactccatacttcctgt
gccctcttctggactatgtgacccactgcacttacctgcacatatccaca
ctgctgatgtctggtgtgctcatcagtcaattccttattgtgggccatgg
ggaagagtgggctcaatgattatctcccatactgtagaaccgaattgcaa
atttttgggagcatcacacacagttctgatggacagaccattgatgactt
cctgagatggtggcctgggtgacagtacacaccccagcaccgctcttata
tggacagactgagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_37540857_37542077
seq2: B6Ng01-162K18.b_41_1283 (reverse)

seq1  ATAAATTG--------------------CCCATTTCA-CCAGAATTTAGA  29
      ||||||||                    ||||||||| ||||| ||||||
seq2  ATAAATTGTGGGCAGTATTAATCTAGCCCCCATTTCACCCAGAGTTTAGA  50

seq1  -GTGTAGA-GAAGACTTCCCATCCATTTGGTCATCCCTGAGATTTAAGGA  77
       ||||||| |||| | |||| |||| |||||||| ||| |||||||||||
seq2  GGTGTAGAGGAAGGC-TCCCCTCCAATTGGTCATACCT-AGATTTAAGGA  98

seq1  GGTCACATTCAGATATGGGGGCTGTGGAATGAATGGAATCTTTGAAGGCA  127
      |||| |||||||||||||||||||| ||||| || ||||||||  || ||
seq2  GGTCCCATTCAGATATGGGGGCTGT-GAATG-ATTGAATCTTTTGAGCCA  146

seq1  GGTAGACAGGTAGGAGGACATGAAAAGATCAACATTCCATG-TAAACAGG  176
      | ||| ||||||||||||||||||| |||||| | |||||| ||||||||
seq2  GTTAGGCAGGTAGGAGGACATGAAAGGATCAATAGTCCATGTTAAACAGG  196

seq1  AAGAAACAGCGTAAGTCAAGGCCAGACGACATTATGA-GAGTGTAGCATG  225
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAGATACAGCGTAAGTCAAGGCCAGACGACATTATGAGGAGTGTAGCATG  246

seq1  AGTTTGTGGACTGGGGCAGTAGAAGAGAAACACTGAAAGATATTGCTGCT  275
      ||||||||||||||||||||||||||||||||||||||||||||| ||| 
seq2  AGTTTGTGGACTGGGGCAGTAGAAGAGAAACACTGAAAGATATTGGTGC-  295

seq1  TACAGCTAAGCATCTGCCTAGAAT-CCCCCAATGAGGGGCTGAGTAGGTG  324
      |||||||||||||||||||||||| |||||||| ||||||||||||||||
seq2  TACAGCTAAGCATCTGCCTAGAATCCCCCCAATAAGGGGCTGAGTAGGTG  345

seq1  GCTCAATGGTAGAGCACCTGTCTAGT-ATGCACACGGCTCTGTATGCCAG  373
      |||||||||||||||||||||||||| ||||||||| |||||||||||||
seq2  GCTCAATGGTAGAGCACCTGTCTAGTAATGCACACGACTCTGTATGCCAG  395

seq1  CCCTAGG-AAAAAAGAAAAACCCTAAAAAGGTAACAGGGAGCTTGATTAT  422
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGAAAAAAAGAAAAACCCTAAAAAGGTAACAGGGAGCTTGATTAT  445

seq1  ATGAGGCTCTGAATGTCAAGCTAAGACATTTTTGCTGATCACAGACTCCT  472
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCTCTGAATGTCAAGCTAAGACATTTTTGCTGATCACAGACTCCT  495

seq1  TAATGGCCCTGTACTCGGTGTAACAAAGGCCATCTTGATGGTGTAAAGAA  522
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGCCCTGTACTCGGTGTAACAAAGGCCATCTTGATGGTGTAAAGAA  545

seq1  ATGAAGGCTGTGATTCTGACTCATTCATTTTTTTGTCACCATTTGTAGGT  572
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGCTGTGATTCTGACTCATTCATTTTTTTGTCACCATTTGTAGGT  595

seq1  TCTTATCTCTAATCCAAGCATTTGCAATATTTAATTGTGTCCATTGTATG  622
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCTCTAATCCAAGCATTTGCAATATTTAATTGTGTCCATTGTATG  645

seq1  TTGGGTGGATGGATGGATAGATGGATAGATGGATGGATGGACCAATGGGT  672
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGGATGGATGGATAGATGGATAGATGGATGGATGGACCAATGGGT  695

seq1  AGATAAATAGGATCAACAGATAATGAGTAGATAGATGGATTATAGGTGAA  722
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGATAAATAGGATCAACAGATAATGAGTTGATAGATGGATTATAGGTGAA  745

seq1  TGAGTGAATAAATGAGTGCAGATGGAGGAATGGGCTAGTGAATGTGTGAA  772
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGAATAAATGAGTGCAGATGGAGGAATGGGCTAGTGAATGTGTGAA  795

seq1  TAGATAAATAATCTTGCATACATCGATTGCCTTATTTTCCATGTAAATCT  822
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAAATAATCTTGCATACATCGATTGCCTTATTTTCCATGTAAATCT  845

seq1  TAATTCCTGCTTGACTCAAGCCATCCATTCCTCTTTTTTTTTTTTAATAG  872
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCTGCTTGACTCAAGCCATCCATTCCTCTTTTTTTTTTTTAATAG  895

seq1  ACACAACTCTTTAGATGTTAGGGGGAAGAGTCAGTGAGTCCCAGTGAGAA  922
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACTCTTTAGATGTTAGGGGGAAGAGTCAGTGAGTCCCAGTGAGAA  945

seq1  CTGAGTTGTACACATAAGGCCAGTTTGAAAGTGCCCATTTCAAGGACTGG  972
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTGTATACATAAGGCCAGTTTGAAAGTGCCCATTTCAAGGACTGG  995

seq1  ACCCCCCCAATTCCCGGAGCCATTGCTCAGTTATCCGTTGTGCTTCTCTC  1022
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCCCAATTCCCGGAGCCATTGCTCAGTTATCCGTTGTGCTTCTCTC  1045

seq1  GAGAGTTCAGACTGTCAAGTGTGTAGACAGTCGAGCTGCCTTACTGAAGA  1072
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTCAGTCTGTCAAGTGTGTAGACAGTCGAGCTGCCTTACTGAAGA  1095

seq1  CCACAAGTTACAAATGCACTCTGCTTTACCTCTACAGGCTCCCATGTGCC  1122
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAGTTACAAATGCACTCTGCTTTACCTCTACAGGCTCCCATGTGCC  1145

seq1  AACTGCAATTGTGGGGGACACAGAATCATGACTCTGCTCAGGGGAAGTGC  1172
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCAATTGTGGGGGACACAGAATCATGACTCTGCTCAGGGGAAGTGC  1195

seq1  AAACATCCATGAAAGTCCACCCTGCTTCTCTTCCAAGATGAGAGAATTC  1221
      |||| |||| |||||||||||||||||||||||||||| ||||||||||
seq2  AAACTTCCACGAAAGTCCACCCTGCTTCTCTTCCAAGA-GAGAGAATTC  1243

seq1: chr7_37384075_37384989
seq2: B6Ng01-162K18.g_66_980

seq1  GAATTCTATATCCATTCAGCTCTGCCTGGCGCCTCTCTGAAGATTTATTG  50
      ||||||| | ||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCCATTCAGCTCTGCCTGGCGCCTCTCTGAAGATTTATTG  50

seq1  GCATAACAGACTCTGCTTATTTCTTACCATCTCTGAAAGTGCACATATTC  100
      |||||||||||||||||||||||||||||||||||||||||| | |||||
seq2  GCATAACAGACTCTGCTTATTTCTTACCATCTCTGAAAGTGCTCTTATTC  100

seq1  TCAGAGAGGAGGGACCACATCTTCCTATCTGTGCTTTTCATGTCTGCTCC  150
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCAGAGAGGAGGGACCACATCTTCCTATCTGTGCTTTTCCTGTCTGCTCC  150

seq1  CAGGAGCATCTGTCTGTATGTCTCTTCACTGTAACAAAATACCCAACAGA  200
      |  |||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTAGAGCATCTGTCTGTATGTCTCTTCACTGTAACAAAATACCCAACTGA  200

seq1  ACAGTTCAAGGAAGACAGGCTTCATTTTGACTCTGTTTAAGGGGACTCGA  250
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACAGTTCAAGGAAGACAGGCTTCATTTTGACTCTGTTT-AGGGGACTCGA  249

seq1  GGACTCAGTCTGTGAACCTGGTTCAGGTTTCTAAGCGGAATGTCAGGACA  300
      ||||||||||||||||||||  |||||||||| |||||||||||| ||||
seq2  GGACTCAGTCTGTGAACCTGACTCAGGTTTCTTAGCGGAATGTCACGACA  299

seq1  AAAAGAGCATAGGGGAGAAAACCATTGTTCACATCATGGTGGCCAGGAAG  350
      || |||||||| ||||||||||||||||||||||| ||||||||||||||
seq2  AATAGAGCATAAGGGAGAAAACCATTGTTCACATCTTGGTGGCCAGGAAG  349

seq1  TAGAGGGTGAAGTGGACAGAAAGTGGCTATGGATAATATACACCCAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGTGAAGTGGACAGAAAGTGGCTATGGATAATATACACCCAATGA  399

seq1  CCCATCCCTAACGATCTACTTCCTCTAGCAACTCCCCACTTGTCAATGAT  450
      ||| ||||||||||||||||||||||| ||||  ||| |||||| |||||
seq2  CCCTTCCCTAACGATCTACTTCCTCTATCAACCTCCCTCTTGTCTATGAT  449

seq1  TTCAGAACCTCCCAAAATAGCACTAGCAGCTAGAGATCAAACATTTAAAG  500
      ||| ||||||||||||||||||||||  ||||||||||||||||||||||
seq2  TTCGGAACCTCCCAAAATAGCACTAGACGCTAGAGATCAAACATTTAAAG  499

seq1  CATGAACAATGATGGACATTTGATCAGGCTGGAGAGATGGCTCGATTGGT  550
      |||||  |||||||||||||||||  ||||||||||||||||||||||||
seq2  CATGAGAAATGATGGACATTTGATGTGGCTGGAGAGATGGCTCGATTGGT  549

seq1  GGTTAAGGACACTTGCTGATCTTCCAGAGGGCCCAAGTTTGGTCTCTAGC  600
      ||||||||||| |||| |||||||||||||||||||||||||||||||||
seq2  GGTTAAGGACATTTGCAGATCTTCCAGAGGGCCCAAGTTTGGTCTCTAGC  599

seq1  ACCCACACTGGGTGGCCCAAGGCCCTGTAACTCCAACTCCATAGATCCTG  650
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  ACCCACACTGGGTGGCCCAAGGCCCTGTAACTCCAACTCCATACTTCCTG  649

seq1  TGCCCTCTTCTGGCCTATGTGAGCCACTGCACTTACCTGCACATACCCAC  700
      ||||||||||||| |||||||| |||||||||||||||||||||| ||||
seq2  TGCCCTCTTCTGGACTATGTGACCCACTGCACTTACCTGCACATATCCAC  699

seq1  AC-ACAGACATACATGCATGCACAGAAGTCAATAAATAAATGTAGTCCAT  749
      ||  | ||  | |  |  ||| ||  |||||||   | | ||| | ||||
seq2  ACTGCTGATGT-CTGGTGTGCTCATCAGTCAATTCCTTATTGTGGGCCAT  748

seq1  -GGGAGGAATGGGCTCTATGAGAATCTCTCAGACAAGTGAACCAAAGTAC  798
       |||| || ||||||| ||||  ||||| || ||    ||||| || | |
seq2  GGGGAAGAGTGGGCTCAATGATTATCTCCCATACTGTAGAACCGAATTGC  798

seq1  AAATATTTGGAAGCATCACACACAGTTCTGGTGGGGAGACCATGGATGAC  848
      |||| ||||| ||||||||||||||||||| |||  ||||||| ||||||
seq2  AAATTTTTGGGAGCATCACACACAGTTCTGATGGACAGACCATTGATGAC  848

seq1  TT-ATATCATGGTGGCATGGGTGACAGTATAGTCCCCAGCAGTGGTTAGA  897
      ||  |   |||||||| |||||||||||| |  ||||||||   | |   
seq2  TTCCTGAGATGGTGGCCTGGGTGACAGTACACACCCCAGCA-CCGCTCTT  897

seq1  ATGTGGGCAGACTGAGAG  915
      || ||| |||||||||||
seq2  ATATGGACAGACTGAGAG  915