BAC Information

Click to search

BAC

Clone NameB6Ng01-162L13
Chromosome7 (Build37)
Map Location 116,754,901 - 116,755,986
singlet/doubletsinglet
Overlap geneSt5
Upstream geneOlfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513, Olfr514, Olfr515-ps1, Olfr516, Olfr517, Olfr518, Olfr519, Nlrp10, Eif3s5, BC049265, Tub, Ric3, Lmo1, Stk33, EG668320, 1700095J03Rik, Trim66, Rpl27a
Downstream geneLOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1, Tmem41b, Ipo7, AA474408, Zfp143, Wee1, Swap70, EG668368, Sbf2, LOC668246
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162L13.b
ACCDH955489
length1,082
definitionDH955489|Mus musculus domesticus DNA, BAC clone: B6Ng01-162L13, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagacggttatcaacctgacttccgaaccccaggcttcaggtct
gtgcttctctcttaatcacaccagcagaagctcttgtaggaggagatgaa
gcaggaaggaaatcagaacaatataacatcaacggaagtcccacagttca
tacctttttggatcctccccagcttttagcccacataatctgcgttcctt
gacttaattggtaaactaattaagaaggcatacataccatcaggcaccag
agatacctctgagcccaggagcaagtgaaaaaatgtactgaccccagtgt
taagtgcttgctaggtctttcataagtataaccctgggtccctcagaagc
aggccagccttctgactatatatggactccaataggaagtcaaggaaaac
ctcaggggtcctgcctgggcttatcattagaaaggggcagacagttctag
aaagagcatgcccacattacaagcaggcagggttctaccagaggtacttt
catatagaaccatatgctcgctgaacaaggtgtgcatgcattcacaaaca
tacacttcacatatacaatgatatgttatatatcatatatagcatagcat
acataggaagttctcctaggccaggctatctcttaatccactgttgctgc
tgagaactactttcttcttagccctcttagcaaggacctctctcctgtca
cttctagatctttctatcataatgcttagtttaatctccttttatcatat
tcagacagctcactgtattgattcccaaaggcaatctctaattcacagac
aaacttttcagctacagcaggcctcacaggagaagaaaccgacgtggttt
caagacaagcacatagaaacaggcctattgtggtttaagcagcttcatac
cctaatttgcatgtaatttgccctttacagggacagtcttagagaagcct
aaatattcagtcattgcaattgtttcacatgctccacagttgtattcttt
atgtcagagtcagagagccaaggggcggggggagatcattagagaaaatc
ttcattatgtagtctaactcattaaactcttc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_116754901_116755986
seq2: B6Ng01-162L13.b_45_1126

seq1  GAATTCCAGACGGTTATCAACCTGACTTCCGAACCCCAGGCTTCAGGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACGGTTATCAACCTGACTTCCGAACCCCAGGCTTCAGGTCT  50

seq1  GTGCTTCTCTCTTAATCACACCAGCAGAAGCTCTTGTAGGAGGAGATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCTCTCTTAATCACACCAGCAGAAGCTCTTGTAGGAGGAGATGAA  100

seq1  GCAGGAAGGAAATCAGAACAATATAACATCAACGGAAGTCCCACAGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAGGAAATCAGAACAATATAACATCAACGGAAGTCCCACAGTTCA  150

seq1  TACCTTTTTGGATCCTCCCCAGCTTTTAGCCCACATAATCTGCGTTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTTTGGATCCTCCCCAGCTTTTAGCCCACATAATCTGCGTTCCTT  200

seq1  GACTTAATTGGTAAACTAATTAAGAAGGCATACATACCATCAGGCACCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAATTGGTAAACTAATTAAGAAGGCATACATACCATCAGGCACCAG  250

seq1  AGATACCTCTGAGCCCAGGAGCAAGTGAAAAAATGTACTGACCCCAGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCTCTGAGCCCAGGAGCAAGTGAAAAAATGTACTGACCCCAGTGT  300

seq1  TAAGTGCTTGCTAGGTCTTTCATAAGTATAACCCTGGGTCCCTCAGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGCTTGCTAGGTCTTTCATAAGTATAACCCTGGGTCCCTCAGAAGC  350

seq1  AGGCCAGCCTTCTGACTATATATGGACTCCAATAGGAAGTCAAGGAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCCTTCTGACTATATATGGACTCCAATAGGAAGTCAAGGAAAAC  400

seq1  CTCAGGGGTCCTGCCTGGGCTTATCATTAGAAAGGGGCAGACAGTTCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGGTCCTGCCTGGGCTTATCATTAGAAAGGGGCAGACAGTTCTAG  450

seq1  AAAGAGCATGCCCACATTACAAGCAGGCAGGGTTCTACCAGAGGTACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCATGCCCACATTACAAGCAGGCAGGGTTCTACCAGAGGTACTTT  500

seq1  CATATAGAACCATATGCTCGCTGAACAAGGTGTGCATGCATTCACAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAGAACCATATGCTCGCTGAACAAGGTGTGCATGCATTCACAAACA  550

seq1  TACACTTCACATATACAATGATATGTTATATATCATATATAGCATAGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTCACATATACAATGATATGTTATATATCATATATAGCATAGCAT  600

seq1  ACATAGGAAGTTCTCCTAGGCCAGGCTATCTCTTAATCCACTGTTGCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGAAGTTCTCCTAGGCCAGGCTATCTCTTAATCCACTGTTGCTGC  650

seq1  TGAGAACTACTTTCTTCTTAGCCCTCTTAGCAAGGACCTCTCTCCTGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACTACTTTCTTCTTAGCCCTCTTAGCAAGGACCTCTCTCCTGTCA  700

seq1  CTTCTAGATCTTTCTATCATAATGCTTAGTTTAATCTCCTTTTATCATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGATCTTTCTATCATAATGCTTAGTTTAATCTCCTTTTATCATAT  750

seq1  TCAGACAGCTCACTGTATTGATTCCCAAAGGCAATCTCTAATTCACAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACAGCTCACTGTATTGATTCCCAAAGGCAATCTCTAATTCACAGAC  800

seq1  AAAC-TTTCAGCTACAGCAGGCCTCACAGGAGAAGAAACCGACGTGGTTT  849
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTTCAGCTACAGCAGGCCTCACAGGAGAAGAAACCGACGTGGTTT  850

seq1  CAAGACAAGCACATAGAAACAGGCCTATTGTGGTTGAAGCAGCTTCATAC  899
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAAGACAAGCACATAGAAACAGGCCTATTGTGGTTTAAGCAGCTTCATAC  900

seq1  CCTAA-TTGCATGTAATTTGCCCTTTTACAGGGACAGTCTTAGAGAAGCC  948
      ||||| ||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCTAATTTGCATGTAATTTGCCC-TTTACAGGGACAGTCTTAGAGAAGCC  949

seq1  TAAATATTCAGTCATTGCAATTGTTTCAACAGGCCCCAACAG-TGTATTC  997
      ||||||||||||||||||||||||||| ||| || || |||| |||||||
seq2  TAAATATTCAGTCATTGCAATTGTTTC-ACATGCTCC-ACAGTTGTATTC  997

seq1  ATTATGTCAGAGTCAGAGAGCCAAAGGGGCGGGGGAGGATCATTAGAGAA  1047
       ||||||||||||||||||||| ||||||||||||  |||||||||||||
seq2  TTTATGTCAGAGTCAGAGAGCC-AAGGGGCGGGGGGAGATCATTAGAGAA  1046

seq1  AATCTTCAATAAGGTAGTCTAAACTCATAAAACCTCTTC  1086
      ||||||| || | ||||||| ||||||| ||| ||||||
seq2  AATCTTC-ATTATGTAGTCT-AACTCATTAAA-CTCTTC  1082