BAC Information

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BAC

Clone NameB6Ng01-162N15
Chromosome7 (Build37)
Map Location 60,265,381 - 60,266,598
singlet/doubletsinglet
Overlap genenone
Upstream gene1700015G11Rik, EG668783, EG620782, LOC100040692
Downstream geneGm1865, LOC100040718, LOC668789
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162N15.bB6Ng01-162N15.g
ACCDH955585DH955586
length1,1981,082
definitionDH955585|Mus musculus domesticus DNA, BAC clone: B6Ng01-162N15, 5' end.DH955586|Mus musculus domesticus DNA, BAC clone: B6Ng01-162N15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagcatggaacgcattacagagctttcaaagagagggtatgtga
gaatgtcagcagggctaaagagtggcagctagtgctcagataggagcttc
cacatggtttctatctgtaatcaactgtgagatttgtaaaattctagact
catcatgttccacctcatacagctgtaaagacaagagacacagaaaattt
tattatagctttttaaggggtggacagcaaacttggtgctggggttgttg
caattcacaggactactgatttatgctgctggtgttgaaaatgttggtac
ctttggttatgaaagtgaatagcattttactgatcatacaaaatattttc
ctatagaaagggaacagaaaattaaaagtaaaaatgcaaacaattgagga
ggaatattacagaacctaaaacaaaccagcaaacaaacaactttaaatat
tagagagggctgtggagacagtttatttgttaaaagcactaactgttcta
gtagaggaccagagtttagtttccagcactcaaaggggaatttgtaatct
gctgtaattttatgtccaagagattcaacagccaattacaatttaaactc
tgaaatgttgtgaaatacagcaacatcaatgaatacatgagtactcaaga
gttggtttcctataacaagcctttttcaaagatttatttttctttatctg
tgtgactatgtctgtggcatagagcaagtgaatgcaccatgcacagaaag
taggagagggtgtttgacattctggagctgctgttactagtgggtatgaa
tgtccctaatataggtgcagagaagaaaacttgggtcctctggagatgta
tcagtctgagctatatctccagtacctgtaacaactcatgcagtacacat
caagtttattagcctctagtttgtacttattgtttaaaataaagtgcata
agattggcatcttctatgacacttatttatttatttatttatttatttat
ttatttagtcactttacatctcatcacagtcccctccttcctctcttcca
gtcccaccttttaaaatcctccccgttgttccacttttttttctcaagaa
gtgtgttcctcttggatcccacactcagtagcatcttatcagcagtctaa
gaacttctcctcactgagtccacagcagttccacagtggggaaagggg
gaattctgtaggcttcttgtatgttcatgggcatctctttctttaggttt
gggaagttttcttctataattttgttaaagatatttgctggccctttaag
ttgaaaatcttcattttcatctactcctattatccatagtcttggtcttc
tcatcgtgtcctagatttcctggatgttttgagttaggatctttttgcat
ttttcattttctttgactgttgagcccatgttctctatggaaccttctgc
acctgagattctctcttccatctcttgtattctgttgctgatggttcgtt
ccatctatggttccagatttctttcgaagggtttctatctccagcctggt
ctcactttggcttttctttattgtgtctacttcccttttcaattccatca
cctttttggttgtatttttgtgtttttctttaaggaattctacctctttg
attgtgttttcctgtttttctttaaggacttgaaactctttagcagtgtt
ctcctggatttctttaaatgatttattaaagtccttcctgatgtcctcta
ccatcatcatgagatatgcttttaaatcctcgtctagctttttgggtgtg
ttggggtgcccaggactggctgaggtgggagtgaagagttctgatgatgg
tgagtggtcttggtttctgttagtaagattcttacatttacctttagcca
tctgttaatttctggagttagttgttatagttgtctctgtttagagattg
ttcctccagtgattctgttagcctctatcagcagaccggggagagtagtt
ctcttgtgattttcagcggccagagaactcttctgtaggcaagctctcct
cttgcagggacggttcacatatatctgggattcagacctgcctcctggca
gaagatgaaggcatgaaacagggcctctcctagaagctgtgtcacttctg
tagctgcacttcactacacagactagtttctgagagatccagtccaagat
tgcttctgcaggtgtccaccaaagcatcctgcatgaagacaccttctctc
ttgcaggcaggtcatgaatgtctggaacctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_60265381_60266598
seq2: B6Ng01-162N15.b_46_1243

seq1  GAATTCAAGCATGGAACGCATTACAGAGCTTTCAAAGAGAGGGTATGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCATGGAACGCATTACAGAGCTTTCAAAGAGAGGGTATGTGA  50

seq1  GAATGTCAGCAGGGCTAAAGAGTGGCAGCTAGTGCTCAGATAGGAGCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCAGCAGGGCTAAAGAGTGGCAGCTAGTGCTCAGATAGGAGCTTC  100

seq1  CACATGGTTTCTATCTGTAATCAACTGTGAGATTTGTAAAATTCTAGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGTTTCTATCTGTAATCAACTGTGAGATTTGTAAAATTCTAGACT  150

seq1  CATCATGTTCCACCTCATACAGCTGTAAAGACAAGAGACACAGAAAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGTTCCACCTCATACAGCTGTAAAGACAAGAGACACAGAAAATTT  200

seq1  TATTATAGCTTTTTAAGGGGTGGACAGCAAACTTGGTGCTGGGGTTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAGCTTTTTAAGGGGTGGACAGCAAACTTGGTGCTGGGGTTGTTG  250

seq1  CAATTCACAGGACTACTGATTTATGCTGCTGGTGTTGAAAATGTTGGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCACAGGACTACTGATTTATGCTGCTGGTGTTGAAAATGTTGGTAC  300

seq1  CTTTGGTTATGAAAGTGAATAGCATTTTACTGATCATACAAAATATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTTATGAAAGTGAATAGCATTTTACTGATCATACAAAATATTTTC  350

seq1  CTATAGAAAGGGAACAGAAAATTAAAAGTAAAAATGCAAACAATTGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGAAAGGGAACAGAAAATTAAAAGTAAAAATGCAAACAATTGAGGA  400

seq1  GGAATATTACAGAACCTAAAACAAACCAGCAAACAAACAACTTTAAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATTACAGAACCTAAAACAAACCAGCAAACAAACAACTTTAAATAT  450

seq1  TAGAGAGGGCTGTGGAGACAGTTTATTTGTTAAAAGCACTAACTGTTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGGGCTGTGGAGACAGTTTATTTGTTAAAAGCACTAACTGTTCTA  500

seq1  GTAGAGGACCAGAGTTTAGTTTCCAGCACTCAAAGGGGAATTTGTAATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGGACCAGAGTTTAGTTTCCAGCACTCAAAGGGGAATTTGTAATCT  550

seq1  GCTGTAATTTTATGTCCAAGAGATTCAACAGCCAATTACAATTTAAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAATTTTATGTCCAAGAGATTCAACAGCCAATTACAATTTAAACTC  600

seq1  TGAAATGTTGTGAAATACAGCAACATCAATGAATACATGAGTACTCAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGTTGTGAAATACAGCAACATCAATGAATACATGAGTACTCAAGA  650

seq1  GTTGGTTTCCTATAACAAGCCTTTTTCAAAGATTTATTTTTCTTTATCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTTTCCTATAACAAGCCTTTTTCAAAGATTTATTTTTCTTTATCTG  700

seq1  TGTGACTATGTCTGTGGCATAGAGCAAGTGAATGCACCATGCACAGAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTATGTCTGTGGCATAGAGCAAGTGAATGCACCATGCACAGAAAG  750

seq1  TAGGAGAGGGTGTTTGACATTCTGGAGCTGCTGTTACTAGTGGGTATGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAGGGTGTTTGACATTCTGGAGCTGCTGTTACTAGTGGGTATGAA  800

seq1  TGTCCCTAATATAGGTGCAGAGAAGAAAACTTGGGTCCTCTGGAGATGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTAATATAGGTGCAGAGAAGAAAACTTGGGTCCTCTGGAGATGTA  850

seq1  TCAGTCTGAGCTATATCTCCAGTACCTGTAACAACTCATGCAGTACACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTGAGCTATATCTCCAGTACCTGTAACAACTCATGCAGTACACAT  900

seq1  CAAGTTTATTAGCCTCTAGTTTGTACTTATTGTTTAAAATAAGGTGCATA  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAAGTTTATTAGCCTCTAGTTTGTACTTATTGTTTAAAATAAAGTGCATA  950

seq1  AGATTGGCATCTTCTATGACACTTTATTTATTTATTTATTTATTTATTTA  1000
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGATTGGCATCTTCTATGACAC-TTATTTATTTATTTATTTATTTATTTA  999

seq1  TTTATTTTAGTCACTTTACATCTCAATCACAGTCCCCTCCCTCCTCTCTT  1050
      |||| ||||||||||||||||||| ||||||||||||||| |||||||||
seq2  TTTA-TTTAGTCACTTTACATCTC-ATCACAGTCCCCTCCTTCCTCTCTT  1047

seq1  CCCAGTCCCACTTTTAAAAATTCCTCCCCCGTTGTTCCCACCTTTTCTTC  1100
       |||||||||| ||| |||| |||| |||||||||| |||| |||| |||
seq2  -CCAGTCCCACCTTTTAAAA-TCCT-CCCCGTTGTT-CCACTTTTTTTTC  1093

seq1  TCAGAGAAAGTGTGTTCCTCTTGGTATCCCCACACCCAGTAGCATCTAAT  1150
      ||| || ||||||||||||||||| || ||||||| ||||||||||| ||
seq2  TCA-AG-AAGTGTGTTCCTCTTGG-AT-CCCACACTCAGTAGCATCTTAT  1139

seq1  TCCAGCAGGTCTAGAGACATTCTCTCTCACTGAGGCCCAACAAGGCAGTT  1200
        ||||| ||||| |||  ||||| ||||||||| ||  |||  ||||||
seq2  --CAGCA-GTCTA-AGAACTTCTC-CTCACTGAGTCC--ACA--GCAGTT  1180

seq1  CACACAGTGGGGAAGGGG-  1218
      | |||||||||||| ||| 
seq2  C-CACAGTGGGGAAAGGGG  1198