BAC Information

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BAC

Clone NameB6Ng01-163B21
Chromosome7 (Build37)
Map Location 125,597,587 - 125,790,166
singlet/doubletdoublet
Overlap geneE030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5
Upstream geneXylt1, LOC669758, Rps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845
Downstream geneMir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b, Gpr139, LOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163B21.bB6Ng01-163B21.g
ACCDH955785DH955786
length1,1581,107
definitionDH955785|Mus musculus domesticus DNA, BAC clone: B6Ng01-163B21, 5' end.DH955786|Mus musculus domesticus DNA, BAC clone: B6Ng01-163B21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,788,998 - 125,790,166)(125,597,587 - 125,598,695)
sequence
gaattcagggtgggttctaatcagagacattgccattcttattagaagaa
attagggttgggctgcaactcctctccagaactgcaaaataaaatgagag
aaagaggaaggagaggaggaagaagaggaagaagaaaactgaggaagtgg
aaaattgaaagcagaaggggtcagaaccccacaattccccctgaggggag
gccctcagtgacttgaagttcccccattagaccacacctctcacatccta
gatccaagctattgtgatggccttcaataagccaaagagaggcctcctga
ggagaaaccaaccttgctaacactttcatctagaactactggcttccaaa
cctgtgagaagacagatttctgttgccccaatcatccgcaaatgaataca
gaggctgacacactcctgagctcacttcccatctggacctcctctctgcc
gaccgtccctccactttgtctagcgtgtgcaatggctctgctacctcgtc
tgtttctagactgatcacttaattttttaaaggcacacgagcatctccca
tccctttcatagtctgcactgtgagacaaggagagcacagatagccatgg
aagtcactattgcagagaagctgagttctgggatagctttcatttagaga
caaggtctcactatgcaacccaggctggccgtgaactcaaaaatcctcct
tcctcaccatctcaggtgttagaatgacagctgtgtaccactatgcccat
cttcatgatttactgatagagtttcttggagtttgcctaaatctaagatg
agccttagaggctggggacacagctcagttggtaaagtatttgtcaccca
agaacaagaacagagttcaattcccagaacccatgtaaaaagcaatctgc
atatgatagtggacacttataattccagcactgggaagcaagaacatatg
gctctctggagctcaagagacagccagataagcttccatggcagtttcaa
gctcaagagagaccctattaaatacgaacaaacaacacaacaacaattag
atagaaagaaagagagtacttgaggacagaagaaacccaaattgtcttct
gtcctcaaatgtggacaaatcttcttgacccactaatgtgcacaatatgc
acatacaa
gaattctatccctcctaatgcagggtctctgggaactggtatccagttcc
tctggtggtgcctctgccatctccagctcttaagatgagccagccatttc
cttagagcaccaagccctgtggggcagaagcatccacataataacagtct
tcagaagggaattaggggtgggagtgcagtctctggccgtagactacctg
ttatcattgaaaagtgcccggatggcagaaacagctgttgccacccatcg
ggccacacagcttctggtttagttactatcgattctggccattctcactg
atgaaacctgttgcccaagtcccttttaattctatggcatataaaacatg
tccttcacctgttccctgtatcccttcctgggctgtgtttctacccagaa
tgcctgggcagtaagaaagctcaaagctaattaaacggatagtctgaaac
agggtccccagacctcaagctatgctgcatacccatcagaattctctggt
ccccatctttgccagggacaagagttctgtcttgcctgtctaatgatttg
tgaccagaggcgacaagccatttcacctctgtgaacctcggttttccttg
tctgcaaaatgaatattatactctttggtgccagtgctggagagaactct
agccacttaggacaaatccacaaaacatggctcaccaggagtggttccct
tttttcccctcagagcatgtatttagcctggggcctcctgctttatttta
tgcttggaaggtggagtatgtatgtcaaggaggaaggaggaaccacatgg
aggttgaaattccaactgctctcatcagctagcctgcctgcaagtcacca
ctcacctctcccctcactgtgagacccaggatgcatctctctgtggggcc
tcagccttctcctcagtgaatggggtcaaaatcagtgcttatggcaggaa
gcaccctgcccttctctgattgatgcatagagtaactgtattatcccata
gcactggtatcagccctcagggaggtcctcattaatgcaaccactactgc
ctttttattctcaagaaatatgaactggaaatcagttctgtggcgagcaa
ttcccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_125788998_125790166
seq2: B6Ng01-163B21.b_49_1206 (reverse)

seq1  TTGTATGTGCATATGTGTGCACATTAGTGGGGGTC-AGAAGATTTGTCCA  49
      |||||||||||||| |||||||||||||  ||||| ||||||||||||||
seq2  TTGTATGTGCATAT-TGTGCACATTAGT--GGGTCAAGAAGATTTGTCCA  47

seq1  CATTTGAGGACAGAAGACAATTTTGGGTGTCTTCTGTCCCTCAGGTACTC  99
      |||||||||||||||||||| ||||||| |||||||| ||||| ||||||
seq2  CATTTGAGGACAGAAGACAA-TTTGGGTTTCTTCTGT-CCTCAAGTACTC  95

seq1  TCTATCTTTCTATCTTATTGTTTGTTTGTTTGTTTGTTTGTTTCGTATTT  149
      ||| ||||||||||| ||||     |||||   ||||||| |||||||||
seq2  TCTTTCTTTCTATCTAATTG-----TTGTTGTGTTGTTTG-TTCGTATTT  139

seq1  AATAGGGTCTCTCTTGGGCTTGGAACCTGCCATGGAGGCTTATCTGGCTG  199
      |||||||||||||||| |||| ||| |||||||||| |||||||||||||
seq2  AATAGGGTCTCTCTTGAGCTT-GAAACTGCCATGGAAGCTTATCTGGCTG  188

seq1  TCTCTTGAGCTCCAGAGAGCCATATGTTCTTGCTTCCCAGTGCTGGAATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGAGCTCCAGAGAGCCATATGTTCTTGCTTCCCAGTGCTGGAATT  238

seq1  ATAAGTGTCCACTATCATATGCAGATTGCTTTTTACATGGGTTCTGGGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGTCCACTATCATATGCAGATTGCTTTTTACATGGGTTCTGGGAA  288

seq1  TTGAACTCTGTTCTTGTTCTTGGGTGACAAATACTTTACCAACTGAGCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTCTGTTCTTGTTCTTGGGTGACAAATACTTTACCAACTGAGCTG  338

seq1  TGTCCCCAGCCTCTAAGGCTCATCTTAGATTTAGGCAAACTCCAAGAAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCAGCCTCTAAGGCTCATCTTAGATTTAGGCAAACTCCAAGAAAC  388

seq1  TCTATCAGTAAATCATGAAGATGGGCATAGTGGTACACAGCTGTCATTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCAGTAAATCATGAAGATGGGCATAGTGGTACACAGCTGTCATTCT  438

seq1  AACACCTGAGATGGTGAGGAAGGAGGATTTTTGAGTTCACGGCCAGCCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTGAGATGGTGAGGAAGGAGGATTTTTGAGTTCACGGCCAGCCTG  488

seq1  GGTTGCATAGTGAGACCTTGTCTCTAAATGAAAGCTATCCCAGAACTCAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCATAGTGAGACCTTGTCTCTAAATGAAAGCTATCCCAGAACTCAG  538

seq1  CTTCTCTGCAATAGTGACTTCCATGGCTATCTGTGCTCTCCTTGTCTCAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTGCAATAGTGACTTCCATGGCTATCTGTGCTCTCCTTGTCTCAC  588

seq1  AGTGCAGACTATGAAAGGGATGGGAGATGCTCGTGTGCCTTTAAAAAATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAGACTATGAAAGGGATGGGAGATGCTCGTGTGCCTTTAAAAAATT  638

seq1  AAGTGATCAGTCTAGAAACAGACGAGGTAGCAGAGCCATTGCACACGCTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATCAGTCTAGAAACAGACGAGGTAGCAGAGCCATTGCACACGCTA  688

seq1  GACAAAGTGGAGGGACGGTCGGCAGAGAGGAGGTCCAGATGGGAAGTGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGTGGAGGGACGGTCGGCAGAGAGGAGGTCCAGATGGGAAGTGAG  738

seq1  CTCAGGAGTGTGTCAGCCTCTGTATTCATTTGCGGATGATTGGGGCAACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAGTGTGTCAGCCTCTGTATTCATTTGCGGATGATTGGGGCAACA  788

seq1  GAAATCTGTCTTCTCACAGGTTTGGAAGCCAGTAGTTCTAGATGAAAGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTGTCTTCTCACAGGTTTGGAAGCCAGTAGTTCTAGATGAAAGTG  838

seq1  TTAGCAAGGTTGGTTTCTCCTCAGGAGGCCTCTCTTTGGCTTATTGAAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAAGGTTGGTTTCTCCTCAGGAGGCCTCTCTTTGGCTTATTGAAGG  888

seq1  CCATCACAATAGCTTGGATCTAGGATGTGAGAGGTGTGGTCTAATGGGGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACAATAGCTTGGATCTAGGATGTGAGAGGTGTGGTCTAATGGGGG  938

seq1  AACTTCAAGTCACTGAGGGCCTCCCCTCAGGGGGAATTGTGGGGTTCTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAAGTCACTGAGGGCCTCCCCTCAGGGGGAATTGTGGGGTTCTGA  988

seq1  CCCCTTCTGCTTTCAATTTTCCACTTCCTCAGTTTTCTTCTTCCTCTTCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCTGCTTTCAATTTTCCACTTCCTCAGTTTTCTTCTTCCTCTTCT  1038

seq1  TCCTCCTCTCCTTCCTCTTTCTCTCATTTTATTTTGCAGTTCTGGAGAGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCTCCTTCCTCTTTCTCTCATTTTATTTTGCAGTTCTGGAGAGG  1088

seq1  AGTTGCAGCCCAACCCTAATTTCTTCTAATAAGAATGGCAATGTCTCTGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCAGCCCAACCCTAATTTCTTCTAATAAGAATGGCAATGTCTCTGA  1138

seq1  TTAGAACCCACCCTGAATTC  1169
      ||||||||||||||||||||
seq2  TTAGAACCCACCCTGAATTC  1158

seq1: chr7_125597587_125598695
seq2: B6Ng01-163B21.g_67_1173

seq1  GAATTCTATCCCTCCTAATGCAGGGTCTCTGGGAACTGGTATCCAGTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCCCTCCTAATGCAGGGTCTCTGGGAACTGGTATCCAGTTCC  50

seq1  TCTGGTGGTGCCTCTGCCATCTCCAGCTCTTAAGATGAGCCAGCCATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGGTGCCTCTGCCATCTCCAGCTCTTAAGATGAGCCAGCCATTTC  100

seq1  CTTAGAGCACCAAGCCCTGTGGGGCAGAAGCATCCACATAATAACAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGCACCAAGCCCTGTGGGGCAGAAGCATCCACATAATAACAGTCT  150

seq1  TCAGAAGGGAATTAGGGGTGGGAGTGCAGTCTCTGGCCGTAGACTACCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGGGAATTAGGGGTGGGAGTGCAGTCTCTGGCCGTAGACTACCTG  200

seq1  TTATCATTGAAAAGTGCCCGGATGGCAGAAACAGCTGTTGCCACCCATCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATTGAAAAGTGCCCGGATGGCAGAAACAGCTGTTGCCACCCATCG  250

seq1  GGCCACACAGCTTCTGGTTTAGTTACTATCGATTCTGGCCATTCTCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACACAGCTTCTGGTTTAGTTACTATCGATTCTGGCCATTCTCACTG  300

seq1  ATGAAACCTGTTGCCCAAGTCCCTTTTAATTCTATGGCATATAAAACATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACCTGTTGCCCAAGTCCCTTTTAATTCTATGGCATATAAAACATG  350

seq1  TCCTTCACCTGTTCCCTGTATCCCTTCCTGGGCTGTGTTTCTACCCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCACCTGTTCCCTGTATCCCTTCCTGGGCTGTGTTTCTACCCAGAA  400

seq1  TGCCTGGGCAGTAAGAAAGCTCAAAGCTAATTAAACGGATAGTCTGAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGGCAGTAAGAAAGCTCAAAGCTAATTAAACGGATAGTCTGAAAC  450

seq1  AGGGTCCCCAGACCTCAAGCTATGCTGCATACCCATCAGAATTCTCTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCCCAGACCTCAAGCTATGCTGCATACCCATCAGAATTCTCTGGT  500

seq1  CCCCATCTTTGCCAGGGACAAGAGTTCTGTCTTGCCTGTCTAATGATTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATCTTTGCCAGGGACAAGAGTTCTGTCTTGCCTGTCTAATGATTTG  550

seq1  TGACCAGAGGCGACAAGCCATTTCACCTCTGTGAACCTCGGTTTTCCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGAGGCGACAAGCCATTTCACCTCTGTGAACCTCGGTTTTCCTTG  600

seq1  TCTGCAAAATGAATATTATACACTTTGGTGCCAGTGCTGGAGAGAACTCT  650
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCTGCAAAATGAATATTATACTCTTTGGTGCCAGTGCTGGAGAGAACTCT  650

seq1  AGCCACTTAGGACAAATCCACAAAACATGGCTCACCAGGAGTGGTTCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTTAGGACAAATCCACAAAACATGGCTCACCAGGAGTGGTTCCCT  700

seq1  TTTTTCCCCTCAGAGCATGTATTTAGCCTGGGGCCTCCTGCTTTATTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCCCTCAGAGCATGTATTTAGCCTGGGGCCTCCTGCTTTATTTTA  750

seq1  TGCTTGGAAGGTGGAGTATGTATGTCAAGGAGGAAGGAGGAACCACATGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGAAGGTGGAGTATGTATGTCAAGGAGGAAGGAGGAACCACATGG  800

seq1  AGGTTGAAATTCCAACTGCTCTCATCAGCTAGCCTGCCTGCAAGTCACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGAAATTCCAACTGCTCTCATCAGCTAGCCTGCCTGCAAGTCACCA  850

seq1  CTCACCTCTCCCCTCACTGTGAGACCCAGGATGCATCTCTCTGT-GGGCC  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTCACCTCTCCCCTCACTGTGAGACCCAGGATGCATCTCTCTGTGGGGCC  900

seq1  TCAGCCTTCTCCTCAGTGAATGGGGTCAAAATCAGTGCTTCATGGCAGGA  949
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCAGCCTTCTCCTCAGTGAATGGGGTCAAAATCAGTGCTT-ATGGCAGGA  949

seq1  AGCACCCTGCCC-TCCCTGATTGATGCATAGAGTAACTGTATTTATCCCA  998
      |||||||||||| || ||||||||||||||||||||||||| ||||||||
seq2  AGCACCCTGCCCTTCTCTGATTGATGCATAGAGTAACTGTA-TTATCCCA  998

seq1  TAGCACT-GTATCAGCCCTCA-GGAAGTTCTCAGTAAATGCAACCACTAC  1046
      ||||||| ||||||||||||| ||| || |||| | ||||||||||||||
seq2  TAGCACTGGTATCAGCCCTCAGGGAGGTCCTCA-TTAATGCAACCACTAC  1047

seq1  ATGCCTTTTTATTCTCAAGATATATGAACTGGAGATACAGTTCTGTGGCA  1096
       ||||||||||||||||||| |||||||||||| || |||||||||||| 
seq2  -TGCCTTTTTATTCTCAAGAAATATGAACTGGAAAT-CAGTTCTGTGGC-  1094

seq1  GAGCACATCCCTA  1109
      |||||  ||||||
seq2  GAGCAATTCCCTA  1107