BAC Information

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BAC

Clone NameB6Ng01-163N05
Chromosome7 (Build37)
Map Location 118,709,354 - 118,884,761
singlet/doubletdoublet
Overlap geneGalntl4
Upstream geneSbf2, Adm, B430319F04Rik, Ampd3, Rnf141, Xlkd1, Mrvi1, Ctr9, Eif4g2, LOC100043221, LOC100042658, LOC384658
Downstream geneLOC668399, LOC100042678, Usp47, Dkk3, Mical2, Micalcl, Parva, LOC627808, Tead1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163N05.bB6Ng01-163N05.g
ACCDH956314DH956315
length115368
definitionDH956314|Mus musculus domesticus DNA, BAC clone: B6Ng01-163N05, 5' end.DH956315|Mus musculus domesticus DNA, BAC clone: B6Ng01-163N05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,884,592 - 118,884,761)(118,709,354 - 118,709,727)
sequence
ccctcgtcacttaagtggtcagggtttcaagaggtgctgtgggggggggg
tgttctttagaaagtctacatttaagtgtgtgtgtgtgtgtgtgtatgtg
tgtgtgcggggtgtg
ttgtctaaaatcccattggtctgaatccaagttcaatgctagtgtctctt
cttctaaggtggagaatttccaaaggggtgtggtagatatgatacactgt
agttccagagaccatgctcttgttggcaggatatccatgcattcagcagg
catttctgagcttccctcccatcctctcctagaacaaggaagcccagcct
cagatgtgacatggtgacaatgagtagtcctggagtcagagagaaagaag
ggtcagcactgctcaatacaagccttttctaccatagtatgaattctgat
gaggctggaggaagttggggttgaaaaaggcttaaatctaggcttggata
gtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_118884592_118884761
seq2: B6Ng01-163N05.b_50_164 (reverse)

seq1  CACACCACACACACACACAAACACACATACACACATACACACACACCACA  50
                                                        
seq2  --------------------------------------------------  0

seq1  CACCACACACACCGCACACACACATACACACACACACACACACACTTAAA  100
           ||||| |||||||||||||||||||||||||||||||||||||||
seq2  -----CACACCCCGCACACACACATACACACACACACACACACACTTAAA  45

seq1  TGTAGACTTTCTAAAGAACACCCCCCCCCCACAGCACCTCTTGAAACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACTTTCTAAAGAACACCCCCCCCCCACAGCACCTCTTGAAACCCT  95

seq1  GACCACTTAAGTGACGAGGG  170
      ||||||||||||||||||||
seq2  GACCACTTAAGTGACGAGGG  115

seq1: chr7_118709354_118709727
seq2: B6Ng01-163N05.g_68_441

seq1  GAATTCTTGTCTAAAATCCCATTGGTCTGAATCCAAGTTCAATGCTAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTCTAAAATCCCATTGGTCTGAATCCAAGTTCAATGCTAGTG  50

seq1  TCTCTTCTTCTAAGGTGGAGAATTTCCAAAGGGGTGTGGTAGATATGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTTCTAAGGTGGAGAATTTCCAAAGGGGTGTGGTAGATATGATA  100

seq1  CACTGTAGTTCCAGAGACCATGCTCTTGTTGGCAGGATATCCATGCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAGTTCCAGAGACCATGCTCTTGTTGGCAGGATATCCATGCATTC  150

seq1  AGCAGGCATTTCTGAGCTTCCCTCCCATCCTCTCCTAGAACAAGGAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGCATTTCTGAGCTTCCCTCCCATCCTCTCCTAGAACAAGGAAGCC  200

seq1  CAGCCTCAGATGTGACATGGTGACAATGAGTAGTCCTGGAGTCAGAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCAGATGTGACATGGTGACAATGAGTAGTCCTGGAGTCAGAGAGA  250

seq1  AAGAAGGGTCAGCACTGCTCAATACAAGCCTTTTCTACCATAGTATGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGGTCAGCACTGCTCAATACAAGCCTTTTCTACCATAGTATGAAT  300

seq1  TCTGATGAGGCTGGAGGAAGTTGGGGTTGAAAAAGGCTTAAATCTAGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGAGGCTGGAGGAAGTTGGGGTTGAAAAAGGCTTAAATCTAGGCT  350

seq1  TGGATAGTGTGTGTGTGTGTGTGT  374
      ||||||||||||||||||||||||
seq2  TGGATAGTGTGTGTGTGTGTGTGT  374