BAC Information

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BAC

Clone NameB6Ng01-163P14
Chromosome7 (Build37)
Map Location 9,178,257 - 9,308,763
singlet/doubletdoublet
Overlap geneLOC100042039, LOC100042781, LOC665539
Upstream geneLOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909
Downstream geneLOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163P14.bB6Ng01-163P14.g
ACCDH956423DH956424
length1,155961
definitionDH956423|Mus musculus domesticus DNA, BAC clone: B6Ng01-163P14, 5' end.DH956424|Mus musculus domesticus DNA, BAC clone: B6Ng01-163P14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,178,257 - 9,179,419)(9,307,808 - 9,308,763)
sequence
gaattcaaattctaagcatcatggttcctaaatagacactaatggttttc
tacttccataacttctacgccctgggacaattgatattctttttgcttaa
ggtcccactgaccattgtgtttggcacagagcagcaaaaagaaagtggac
agatggactttgtcaaagcttgatgttgaacatagagttttcctctcagc
cagctaaattacatgaggctttctgtcttaggattcccattcctccaaag
agacctcatgaaaaagggaagtcttataaataggaaacagtaaatcctgg
ctggctcacactttcataggttgagtccattatcattatggtggggagca
tggcagcatccaggcagtcatggagctataataaggtctgagagctccac
aatttgatgccaaggcagcatcaagatagtctcattttcaggaagctaaa
agagggtctctcctgcactttagtgtagattgagcacaggctctcagtgc
cagactccacagtgacacatttttgccaacaagaccacacctattgtaac
aagtacatgactccgaatagtgtccctcactggggactaagcattcaaac
acataagtatatgggggctcaaacctattcaaaccattatagtgtctttg
catttaaaggaacctatggtaaaacaaggctctgaataaccaatgactac
ccaggccctccctcatatgtgcaggctgatatagctgttatattgtcctc
aatcctcagtgaggcactgtgtgctttcaaacaaggcatcaaactcttcc
aggatatcctctggaatatagagattaaaaaatgttacccctccactaaa
actagtattatgtgtcgaactcattcttttctgtcatgaacttggtaagt
gatagaaaaagataaataaaagaaaagggcatgactgttgttagatatgg
tggagggaaaggtttattgtagatatgaggagagattagccagagcctac
cattctgggagagagctgtgtgaatataaccctgacagcaggttcctcta
atagggagggagtcattcttccttctcgtatgctgagaaagacacgaata
agcctctactgtctggcttaccttccttttttccaaggcatagactatga
aggac
gaattctttgtttagctctgtctgtactccatttttaaatggggttattt
ggttttctggactatagcttcttgaattctttatatatattggatattat
tcccctatcaggtataggattggtaaagatcttttcccaattatcctgtc
ccgcgggattcagttatttgtgggtgtgagggggactgcaaacctggaag
gaaatgggaggaagaaaaagaagagcaggagaccaggaaggatacctatc
gaggtctattatgctgaggtgccttctttttaaagcatacatcacaggga
atatgggaggggtcgagggagaattatacaaataacaaagaagtgggcaa
ctgctgacatgggggccgaagtcaggcgccaggcagtgggcactctgcat
cttatctctggaacatagatcctccttgacagccttgggggtcaggctgg
gctcaggtgtaactcatgtccttggatggcaggggaactcaggaagagat
aggaaagaggggactataatttagcttttacagcctcaggtgccaagaaa
ggaatagggaggaagggggttgataaccagctcttagtacaaggccattt
ggtctgttagggagattgtgaagggctcactttctcacgggatggtctct
gacacccaatctgtttgttgatgttttgtcttactaacatactttgccta
acagaagctttgcagttttatgaggtctcatttgtcaatttttgatgtta
cagcataagccactgctgttctgttcaagaaattttccctctggacccat
atccttgaggtttttccccacattctctactacagtttaagtgtttttta
tgtttttataagacacttttttttatacatataaacatatatttatatat
tatatataatattatttccataatatacttaaatatggatatattaatat
catgtaattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9178257_9179419
seq2: B6Ng01-163P14.b_44_1198

seq1  GAATTCAAATTCTAAGCATCATGGTTCCTAAATAGACACTAATGGTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATTCTAAGCATCATGGTTCCTAAATAGACACTAATGGTTTTC  50

seq1  TACTTCCATAACTTCTACGCCCTGGGACAATTGATATTCTTTTTGCTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCATAACTTCTACGCCCTGGGACAATTGATATTCTTTTTGCTTAA  100

seq1  GGTCCCACTGACCATTGTGTTTGGCACAGAGCAGCAAAAAGAAAGTGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCACTGACCATTGTGTTTGGCACAGAGCAGCAAAAAGAAAGTGGAC  150

seq1  AGATGGACTTTGTCAAAGCTTGATGTTGAACATAGAGTTTTCCTCTCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGACTTTGTCAAAGCTTGATGTTGAACATAGAGTTTTCCTCTCAGC  200

seq1  CAGCTAAATTACATGAGGCTTTCTGTCTTAGGATTCCCATTCCTCCAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAAATTACATGAGGCTTTCTGTCTTAGGATTCCCATTCCTCCAAAG  250

seq1  AGACCTCATGAAAAAGGGAAGTCTTATAAATAGGAAACAGTAAATCCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTCATGAAAAAGGGAAGTCTTATAAATAGGAAACAGTAAATCCTGG  300

seq1  CTGGCTCACACTTTCATAGGTTGAGTCCATTATCATTATGGTGGGGAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCACACTTTCATAGGTTGAGTCCATTATCATTATGGTGGGGAGCA  350

seq1  TGGCAGCATCCAGGCAGTCATGGAGCTATAATAAGGTCTGAGAGCTCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCATCCAGGCAGTCATGGAGCTATAATAAGGTCTGAGAGCTCCAC  400

seq1  AATTTGATGCCAAGGCAGCATCAAGATAGTCTCATTTTCAGGAAGCTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGATGCCAAGGCAGCATCAAGATAGTCTCATTTTCAGGAAGCTAAA  450

seq1  AGAGGGTCTCTCCTGCACTTTAGTGTAGATTGAGCACAGGCTCTCAGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTCTCTCCTGCACTTTAGTGTAGATTGAGCACAGGCTCTCAGTGC  500

seq1  CAGACTCCACAGTGACACATTTTTGCCAACAAGACCACACCTATTGTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTCCACAGTGACACATTTTTGCCAACAAGACCACACCTATTGTAAC  550

seq1  AAGTACATGACTCCGAATAGTGTCCCTCACTGGGGACTAAGCATTCAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACATGACTCCGAATAGTGTCCCTCACTGGGGACTAAGCATTCAAAC  600

seq1  ACATAAGTATATGGGGGCTCAAACCTATTCAAACCATTATAGTGTCTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGTATATGGGGGCTCAAACCTATTCAAACCATTATAGTGTCTTTG  650

seq1  CATTTAAAGGAACCTATGGTAAAACAAGGCTCTGAATAACCAATGACTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAAGGAACCTATGGTAAAACAAGGCTCTGAATAACCAATGACTAC  700

seq1  CCAGGCCCTCCCTCATATGTGCAGGCTGATATAGCTGTTATATTGTCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCCTCCCTCATATGTGCAGGCTGATATAGCTGTTATATTGTCCTC  750

seq1  AATCCTCAGTGAGGCACTGTGTGCTTTCAAACAAGGCATCAAACTCTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCAGTGAGGCACTGTGTGCTTTCAAACAAGGCATCAAACTCTTCC  800

seq1  AGGATATCCTCTGGAATATAGAGATTAAAAAATGTTACCCCTCCACTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATCCTCTGGAATATAGAGATTAAAAAATGTTACCCCTCCACTAAA  850

seq1  ACTAGTATTTATGTGTCGAACTCATTCTTTTCTGTCATGAACTTGGTAAG  900
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTA-TTATGTGTCGAACTCATTCTTTTCTGTCATGAACTTGGTAAG  899

seq1  TGATAGAAAAAGATAAATAAAAAGAAAAGGGCATGACTGTTGTTAGATTT  950
      |||||||||||||||||| ||||||||||||||||||||||||||||| |
seq2  TGATAGAAAAAGATAAAT-AAAAGAAAAGGGCATGACTGTTGTTAGATAT  948

seq1  GGTGGAGGGAAAGGTTTATTGTAGATATGAGGGAGAGAATAGCCAGAGGC  1000
      |||||||||||||||||||||||||||||| ||||||| |||||||| ||
seq2  GGTGGAGGGAAAGGTTTATTGTAGATATGA-GGAGAGATTAGCCAGA-GC  996

seq1  AGACACATCTGGGAGAGAGCTGTGTGAATATAACCCTGAGCAGCAGGGTC  1050
        ||   |||||||||||||||||||||||||||||||| ||||||| ||
seq2  CTACCATTCTGGGAGAGAGCTGTGTGAATATAACCCTGA-CAGCAGGTTC  1045

seq1  CCTCCATAGGGGAAGGAGGTCATTCTTCCTCTCT-GTAGGCTGAG-AAGA  1098
      |    ||||||  |||  |||||||||||| ||| ||| |||||| ||||
seq2  CTCTAATAGGG--AGGGAGTCATTCTTCCT-TCTCGTATGCTGAGAAAGA  1092

seq1  CACAAATAAGCTCTCTAACTGCTTGGCTTATCTTCCTTTTTTCCACAGCG  1148
      ||| ||||||| |||| ||||  ||||||| ||||||||||||||  || 
seq2  CACGAATAAGC-CTCT-ACTGTCTGGCTTACCTTCCTTTTTTCCAAGGCA  1140

seq1  ATGACCATGAAGGAC  1163
        ||| |||||||||
seq2  TAGACTATGAAGGAC  1155

seq1: chr7_9307808_9308763
seq2: B6Ng01-163P14.g_70_1030 (reverse)

seq1  ATAATTA--------TAATATATACCCTATTTAAAGTATAATATGGAAAT  42
      |||||||        |||||||| || ||||| ||||||| |||||||||
seq2  ATAATTACATGATATTAATATAT-CCATATTT-AAGTATATTATGGAAAT  48

seq1  AATATTAATATATAATATATAAATATATGTTTATATAAATAATAAATAGT  92
      |||||| |||||||||||||||||||||||||||||  |||| ||| |||
seq2  AATATT-ATATATAATATATAAATATATGTTTATATGTATAAAAAAAAGT  97

seq1  GTCTTATAAAAACATAAAAAACACTTAAACTTGTAGTAGAGAATGTGGGG  142
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTCTTATAAAAACATAAAAAACACTTAAAC-TGTAGTAGAGAATGTGGGG  146

seq1  AAAAACCTCAAGGATATGGGTCCAGAGGGAAAA-TTCCTGAACAGAACAG  191
      ||||||||||||||||||||||||||||||||| ||| ||||||||||||
seq2  AAAAACCTCAAGGATATGGGTCCAGAGGGAAAATTTCTTGAACAGAACAG  196

seq1  CAGTGGCTTATGCTGTAACATCAAAAATTGACAAATGAGACCTCATAAAA  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCTTATGCTGTAACATCAAAAATTGACAAATGAGACCTCATAAAA  246

seq1  CTGCAAAGCTTCTGTTAGTCAAAGTATGTTAGTAAGACAAAACATCAACA  291
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTGCAAAGCTTCTGTTAGGCAAAGTATGTTAGTAAGACAAAACATCAACA  296

seq1  AACAGATTGGGTGTCAGAGACCATCCCGTGAGAAAGTGAGCCCTTCACAA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATTGGGTGTCAGAGACCATCCCGTGAGAAAGTGAGCCCTTCACAA  346

seq1  TCTCCCTAACAGACCAAATGGCCTTGTACTAAGAGCTGGTTATCAACCCC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTAACAGACCAAATGGCCTTGTACTAAGAGCTGGTTATCAACCCC  396

seq1  CTTCCTCCCTATTCCTTTCTTGGCACCTGAGGCTGTAAAAGCTAAATTAT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCCCTATTCCTTTCTTGGCACCTGAGGCTGTAAAAGCTAAATTAT  446

seq1  AGTCCCCTCTTTCCTATCTCTTCCTGAGTTCCCCTGCCATCCAAGGACAT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCCTCTTTCCTATCTCTTCCTGAGTTCCCCTGCCATCCAAGGACAT  496

seq1  GAGTTACACCTGAGCCCAGCCTGACCCCCAAGGCTGTCAAGGAGGATCTA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTACACCTGAGCCCAGCCTGACCCCCAAGGCTGTCAAGGAGGATCTA  546

seq1  TGTTCCAGAGATAAGATGCAGAGTGCCCACTGCCTGGCGCCTGACTTCGG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCAGAGATAAGATGCAGAGTGCCCACTGCCTGGCGCCTGACTTCGG  596

seq1  CCCCCATGTCAGCAGTTGCCCACTTCTTTGTTATTTGTATAATTCTCCCT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATGTCAGCAGTTGCCCACTTCTTTGTTATTTGTATAATTCTCCCT  646

seq1  CGACCCCTCCCATATTCCCTGTGATGTATGCTTTAAAAAGAAGGCACCTC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCCCTCCCATATTCCCTGTGATGTATGCTTTAAAAAGAAGGCACCTC  696

seq1  AGCATAATAGACCTCGATAGGTATCCTTCCTGGTCTCCTGCTCTTCTTTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAATAGACCTCGATAGGTATCCTTCCTGGTCTCCTGCTCTTCTTTT  746

seq1  TCTTCCTCCCATTTCCTTCCAGGTTTGCGGTCCCCCTCACACCCACAAAT  791
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCTTCCTCCCATTTCCTTCCAGGTTTGCAGTCCCCCTCACACCCACAAAT  796

seq1  AACTGAATCCCGCGGGACAGGATAATTGGGAAAAGATCTTTACCAATCCT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAATCCCGCGGGACAGGATAATTGGGAAAAGATCTTTACCAATCCT  846

seq1  ATACCTGATAGGGGAATAATATCCAATATATATAAAGAATTCAAGAAGCT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGATAGGGGAATAATATCCAATATATATAAAGAATTCAAGAAGCT  896

seq1  ATAGTCCAGAAAACCAAATAACCCCATTTAAAAATGGAGTACAGACAGAG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCCAGAAAACCAAATAACCCCATTTAAAAATGGAGTACAGACAGAG  946

seq1  CTAAACAAAAAATTC  956
      ||||||||| |||||
seq2  CTAAACAAAGAATTC  961