BAC Information

Click to search

BAC

Clone NameB6Ng01-164B08
Chromosome7 (Build37)
Map Location 48,167,354 - 48,168,059
singlet/doubletsinglet
Overlap gene2900093B09Rik
Upstream geneEG628161, LOC100039094
Downstream gene4930433I11Rik, EG233164, LOC668555, EG627987, LOC100039269, LOC545955, EG628304, LOC668561, EG434172, LOC100039221, LOC668565, AI987944, EG269902, LOC100039375, EG628359, 2610021A01Rik, 2810426N06Rik, LOC668576, Gprc2a-rs5, LOC628372, EG668579, EG628403, EG628422
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164B08.bB6Ng01-164B08.g
ACCDH956505DH956506
length1,178706
definitionDH956505|Mus musculus domesticus DNA, BAC clone: B6Ng01-164B08, 5' end.DH956506|Mus musculus domesticus DNA, BAC clone: B6Ng01-164B08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaatttaggtgacagc
agatgctggagtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgctggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaagtagccaaggaggtaaagggatttgcaacccta
taggtggacacattatgactaaccagtaccccggagctcttgactctagc
tgcatatatatcaaagatgctagtcggccatcactggaaagagggtccat
ggacttgcaactttaattgcctagttaagggaactccagggccaataggg
ggattgggtgccaagggtggatgtggcg
gaattctcctttcaaatacaccagtaatgcctgttgtgtttgaagttacc
actagactttctttggaaattcaaagatgatttggacaggatacctgacc
aagcactgagaagtttaagataaccacaaaagtataaaggagagggagaa
cactcgagttagaggacagtctgtaccccccagaaactcattgtagagac
actagagcccagagagaggagagggaaaggacaagggaaggagagcatca
gaccctcagagagaggagagggaaaggacaaggggaaggagagcatcaga
ccctgatcctgctagtcctcatcttcacgccatcccatcccactccagca
tcctctaagtcttccctgcctcttttgcagcctagatgtttctttagcca
tttaaaactcgctccaagcttgtccaaaaagaccaaaccattaggatacg
agtcagcagctactaagcttagtagctcatagtaagaccatagtaagcta
ttgagagtcttgagtaaatgtggagtgtatatagcctggatatgaacaga
aagggcatgcaccccttcttattcccgtatatcatggttctttgatatca
tggaacccggacctccaagaaaatgaggtctcttaatgggcaaaacagtg
gcttagaaggcaaatagtataggataggataggataggataggataggat
aggata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_48167354_48168059
seq2: B6Ng01-164B08.g_68_773

seq1  GAATTCTCCTTTCAAATACACCAGTAATGCCTGTTGTGTTTGAAGTTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTTCAAATACACCAGTAATGCCTGTTGTGTTTGAAGTTACC  50

seq1  ACTAGACTTTCTTTGGAAATTCAAAGATGATTTGGACAGGATACCTGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGACTTTCTTTGGAAATTCAAAGATGATTTGGACAGGATACCTGACC  100

seq1  AAGCACTGAGAAGTTTAAGATAACCACAAAAGTATAAAGGAGAGGGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTGAGAAGTTTAAGATAACCACAAAAGTATAAAGGAGAGGGAGAA  150

seq1  CACTCGAGTTAGAGGACAGTCTGTACCCCCCAGAAACTCATTGTAGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCGAGTTAGAGGACAGTCTGTACCCCCCAGAAACTCATTGTAGAGAC  200

seq1  ACTAGAGCCCAGAGAGAGGAGAGGGAAAGGACAAGGGAAGGAGAGCATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGCCCAGAGAGAGGAGAGGGAAAGGACAAGGGAAGGAGAGCATCA  250

seq1  GACCCTCAGAGAGAGGAGAGGGAAAGGACAAGGGGAAGGAGAGCATCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTCAGAGAGAGGAGAGGGAAAGGACAAGGGGAAGGAGAGCATCAGA  300

seq1  CCCTGATCCTGCTAGTCCTCATCTTCACGCCATCCCATCCCACTCCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGATCCTGCTAGTCCTCATCTTCACGCCATCCCATCCCACTCCAGCA  350

seq1  TCCTCTAAGTCTTCCCTGCCTCTTTTGCAGCCTAGATGTTTCTTTAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTAAGTCTTCCCTGCCTCTTTTGCAGCCTAGATGTTTCTTTAGCCA  400

seq1  TTTAAAACTCGCTCCAAGCTTGTCCAAAAAGACCAAACCATTAGGATACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACTCGCTCCAAGCTTGTCCAAAAAGACCAAACCATTAGGATACG  450

seq1  AGTCAGCAGCTACTAAGCTTAGTAGCTCATAGTAAGACCATAGTAAGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCAGCTACTAAGCTTAGTAGCTCATAGTAAGACCATAGTAAGCTA  500

seq1  TTGAGAGTCTTGAGTAAATGTGGAGTGTATATAGCCTGGATATGAACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGTCTTGAGTAAATGTGGAGTGTATATAGCCTGGATATGAACAGA  550

seq1  AAGGGCATGCACCCCTTCTTATTCCCGTATATCATGGTTCTTTGATATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCATGCACCCCTTCTTATTCCCGTATATCATGGTTCTTTGATATCA  600

seq1  TGGAACCCGGACCTCCAAGAAAATGAGGTCTCTTAATGGGCAAAACAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACCCGGACCTCCAAGAAAATGAGGTCTCTTAATGGGCAAAACAGTG  650

seq1  GCTTAGAAGGCAAATAGTATAGGATAGGATAGGATAGGATAGGATAGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGAAGGCAAATAGTATAGGATAGGATAGGATAGGATAGGATAGGAT  700

seq1  AGGATA  706
      ||||||
seq2  AGGATA  706