BAC Information

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BAC

Clone NameB6Ng01-164I05
Chromosome7 (Build37)
Map Location 47,272,523 - 47,427,616
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100038955, LOC100038967, LOC620018, LOC100038914, EG668531, EG628058, EG668618, EG330513, EG434168, 9430025M13Rik, LOC100038985, 3000002G13Rik, EG215208, LOC100039133, LOC100039050, EG668540, 4930558N11Rik
Downstream geneEG628161, LOC100039094, 2900093B09Rik, 4930433I11Rik, EG233164, LOC668555, EG627987, LOC100039269
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164I05.bB6Ng01-164I05.g
ACCDH956817DH956818
length1,1131,078
definitionDH956817|Mus musculus domesticus DNA, BAC clone: B6Ng01-164I05, 5' end.DH956818|Mus musculus domesticus DNA, BAC clone: B6Ng01-164I05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,272,523 - 47,273,635)(47,426,546 - 47,427,616)
sequence
gaattctccatttggagggctgggcttttccttgggcggatacaggagct
ttagtcttccctttgcctcagatttctagaaagattcaaatttcttgagg
tcattgtttcagtttgggggacatgtgtacctcttaagaatagtctccat
ttcttccagggcatttgtaccattttctcagtcgaactgagaagaccttc
tgttggctggctgtgttgctatatttggattataaatattcagccttgag
tccaaatattacttttaatccaacatcatcaaaagtaaagatgatgtata
tgtttgtgtgtattcatatatacatctcaatttattcatagcctagaatg
gttagagatagatcattgcatctcttgagccctaacagcagctcacacag
atgtaggctatcttggttgctacctccccttggtgctcatcatgtctgag
gggaggtgagatccccacacactccttctgacctcctgattgaatgctat
ttctcatgaactctgtctgaagacttgtcatttgtcatgagaacatgatt
tcctcctgattcccaatgtctcaaatatttcacgtcctccttttggtccc
ctcataacaaagtcatactgtcttccaggaaaacgtaagaacagctgtct
cttaatctacatgaacttagtcattggagtctgaaccatctcacatgtgg
ctatagcctcaggaaactctgagctgagttctcgcctcagcactgcagag
gaaggcagatgccaaatggtgctctccatacctaggaacagaaaagcatg
tttctgattagtggaaactgaatcagagtatccattttgtgtgtattttt
ccttccctgtccactaattcatgaaaatggtatcaagacaaaagatgaga
ttaccaatttccgtttcaaatgatgatgccttgcttttaagtttgagatc
actttcacctgtattgaacgataacccacataatttctattacacctaat
gacagagaaaaaaggatatcatccacttaggaactgggagggcacatatt
ggtccatatgggcgtgatctttgccggcctctctctgagaccatcattaa
catttaacagact
gaattcagtactttggatacattatcactgtccacaggtattcctgaagg
tccaagtgttggaggcttgctattacagatagaaagattaggggatggtt
ggaaactctaatgacaggcactcctttaggtcatgaaggagtgcccttta
aattggtttaagatttacgtgttcttcatattgcctttctggatcaactt
acgataaccttgctgggaaatccccctcagcactctgctttgagatatga
cccttgatccacaactctcctctgatgcatctccctatgaagtgcttcag
tgatggcatcaccaaggcccatagcatttgtttgaattttaaacctccac
aagtgagatacgcaaatctctttcccttataaatttagcccgtgtcagct
ttttcatgagagccatgaaaggctggttaatatactaaattatatgtcat
agacaactttaagtgttaacaaggaactttttttaaggtgccaaagcctt
atctgaagggtagagttcctttgggagaatttgagattgcttagtagggg
attgacttagaagaatgatgcccagtgattaattcttccaggacaattca
catagcatctgagtgactatcgtgaaaaacgaacatttcatctgggagac
cctgggaactccttgatttgtgttgccgtgtgactgttacctttttaaat
ctagaagacagaacttagatcatgaaataacgatgtcatcagttctggtt
ctctatgtagctttctctgtctccttactagaactgagttttaaacaaat
ataaacaaataatcaagagaaatgatgattgtctcgtgtggcgccatcag
aatagttcatagtgtcttaaatgagagcttttatgaatttgagaataagt
ggacacttgctagagctggtgggggagtgtcctcagtaaacttcaaatct
gtctctagtacttggtagtggctttctagatgaaaggatggagggtggag
ggttaccatgggaaccaaccttgcttctaatggtggttctggatagttat
agctggaaatacttctctgaacctaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_47272523_47273635
seq2: B6Ng01-164I05.b_44_1156

seq1  GAATTCTCCATTTGGAGGGCTGGGCTTTTCCTTGGGCGGATACAGGAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATTTGGAGGGCTGGGCTTTTCCTTGGGCGGATACAGGAGCT  50

seq1  TTAGTCTTCCCTTTGCCTCAGATTTCTAGAAAGATTCAAATTTCTTGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTTCCCTTTGCCTCAGATTTCTAGAAAGATTCAAATTTCTTGAGG  100

seq1  TCATTGTTTCAGTTTGGGGGACATGTGTACCTCTTAAGAATAGTCTCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTTTCAGTTTGGGGGACATGTGTACCTCTTAAGAATAGTCTCCAT  150

seq1  TTCTTCCAGGGCATTTGTACCATTTTCTCAGTCGAACTGAGAAGACCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCAGGGCATTTGTACCATTTTCTCAGTCGAACTGAGAAGACCTTC  200

seq1  TGTTGGCTGGCTGTGTTGCTATATTTGGATTATAAATATTCAGCCTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCTGGCTGTGTTGCTATATTTGGATTATAAATATTCAGCCTTGAG  250

seq1  TCCAAATATTACTTTTAATCCAACATCATCAAAAGTAAAGATGATGTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATATTACTTTTAATCCAACATCATCAAAAGTAAAGATGATGTATA  300

seq1  TGTTTGTGTGTATTCATATATACATCTCAATTTATTCATAGCCTAGAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTGTGTATTCATATATACATCTCAATTTATTCATAGCCTAGAATG  350

seq1  GTTAGAGATAGATCATTGCATCTCTTGAGCCCTAACAGCAGCTCACACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAGATAGATCATTGCATCTCTTGAGCCCTAACAGCAGCTCACACAG  400

seq1  ATGTAGGCTATCTTGGTTGCTACCTCCCCTTGGTGCTCATCATGTCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGCTATCTTGGTTGCTACCTCCCCTTGGTGCTCATCATGTCTGAG  450

seq1  GGGAGGTGAGATCCCCACACACTCCTTCTGACCTCCTGATTGAATGCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGTGAGATCCCCACACACTCCTTCTGACCTCCTGATTGAATGCTAT  500

seq1  TTCTCATGAACTCTGTCTGAAGACTTGTCATTTGTCATGAGAACATGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATGAACTCTGTCTGAAGACTTGTCATTTGTCATGAGAACATGATT  550

seq1  TCCTCCTGATTCCCAATGTCTCAAATATTTCACGTCCTCCTTTTGGTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGATTCCCAATGTCTCAAATATTTCACGTCCTCCTTTTGGTCCC  600

seq1  CTCATAACAAAGTCATACTGTCTTCCAGGAAAACGTAAGAACAGCTGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAACAAAGTCATACTGTCTTCCAGGAAAACGTAAGAACAGCTGTCT  650

seq1  CTTAATCTACATGAACTTAGTCATTGGAGTCTGAACCATCTCACATGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATCTACATGAACTTAGTCATTGGAGTCTGAACCATCTCACATGTGG  700

seq1  CTATAGCCTCAGGAAACTCTGAGCTGAGTTCTCGCCTCAGCACTGCAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGCCTCAGGAAACTCTGAGCTGAGTTCTCGCCTCAGCACTGCAGAG  750

seq1  GAAGGCAGATGCCAAATGGTGCTCTCCATACCTAGGAACAGAAAAGCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAGATGCCAAATGGTGCTCTCCATACCTAGGAACAGAAAAGCATG  800

seq1  TTTCTGATTAGTGGAAACTGAATCAGAGTATCCATTTTGTGTGTATTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGATTAGTGGAAACTGAATCAGAGTATCCATTTTGTGTGTATTTTT  850

seq1  CCTTCCCTGTCCACTAATTCATGAAAATGGTATCAAGACAAAAGATGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCTGTCCACTAATTCATGAAAATGGTATCAAGACAAAAGATGAGA  900

seq1  TTACCAATTTCCGTTTCAAATGATGATGCCTTGCTTTTAAGTTTGAGATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAATTTCCGTTTCAAATGATGATGCCTTGCTTTTAAGTTTGAGATC  950

seq1  ACTATCACCTTGTATTGAACGATAACCCACATAATTTCTATTACAACCTA  1000
      ||| ||||| |||||||||||||||||||||||||||||||||| |||||
seq2  ACTTTCACC-TGTATTGAACGATAACCCACATAATTTCTATTAC-ACCTA  998

seq1  ATGACAGAGAAAAAAGAATATCATCCACTCA-GAACTGTGAGGGCACCAT  1049
      |||||||||||||||| |||||||||||| | |||||| ||||||| |||
seq2  ATGACAGAGAAAAAAGGATATCATCCACTTAGGAACTGGGAGGGCA-CAT  1047

seq1  A-TGGTCCATATGGTCGTGATCTTTGCCGTGCTTCTCCCTGAG-CCATCA  1097
      | |||||||||||| |||||||||||||| || |||| ||||| ||||||
seq2  ATTGGTCCATATGGGCGTGATCTTTGCCG-GCCTCTCTCTGAGACCATCA  1096

seq1  TT-ACATTTAACAGACT  1113
      || ||||||||||||||
seq2  TTAACATTTAACAGACT  1113

seq1: chr7_47426546_47427616
seq2: B6Ng01-164I05.g_71_1148 (reverse)

seq1  TCTTATGTTCAGAGAGTTATT--CAGC-ATAACAAT-CAGAAGCAACACT  46
      ||||| |||||||||  ||||  |||| ||||| || ||||| || || |
seq2  TCTTAGGTTCAGAGAAGTATTTCCAGCTATAACTATCCAGAACCACCA-T  49

seq1  TAGGAGCAAGGTT-GTTTCCATGGTAA-CCTCCACCCT-CATCC-TTCAT  92
      ||| ||||||||| ||| ||||||||| |||||||||| ||||| |||||
seq2  TAGAAGCAAGGTTGGTTCCCATGGTAACCCTCCACCCTCCATCCTTTCAT  99

seq1  ACTAGAAAGCCACTACCAAGTACTAGAGACAGATTTGAAGTTTACTGAGG  142
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CTAGAAAGCCACTACCAAGTACTAGAGACAGATTTGAAGTTTACTGAGG  148

seq1  ACACTCCCCAACCAGCTCTAGCAAGTGTCCACTTATTCTCAAATTCAT-A  191
      ||||||||| |||||||||||||||||||||||||||||||||||||| |
seq2  ACACTCCCCCACCAGCTCTAGCAAGTGTCCACTTATTCTCAAATTCATAA  198

seq1  AAGCTCTCATTTAAGACACTATGAACTATTCTGATGGCGCCACACGAGAC  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTCATTTAAGACACTATGAACTATTCTGATGGCGCCACACGAGAC  248

seq1  AATCATCATTTCTCTTGATTATTTGTTTATATTTGTTTAAAACTCAGTTC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCATTTCTCTTGATTATTTGTTTATATTTGTTTAAAACTCAGTTC  298

seq1  TAGTAAGGAGACAGAGAAAGCTACATAGAGAACCAGAACTGATGACATCG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGGAGACAGAGAAAGCTACATAGAGAACCAGAACTGATGACATCG  348

seq1  TTATTTCATGATCTAAGTTCTGTCTTCTAGATTTAAAAAGGTAACAGTCA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCATGATCTAAGTTCTGTCTTCTAGATTTAAAAAGGTAACAGTCA  398

seq1  CACGGCAACACAAATCAAGGAGTTCCCAGGGTCTCCCAGATGAAATGTTC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGCAACACAAATCAAGGAGTTCCCAGGGTCTCCCAGATGAAATGTTC  448

seq1  GTTTTTCACGATAGTCACTCAGATGCTATGTGAATTGTCCTGGAAGAATT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCACGATAGTCACTCAGATGCTATGTGAATTGTCCTGGAAGAATT  498

seq1  AATCACTGGGCATCATTCTTCTAAGTCAATCCCCTACTAAGCAATCTCAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTGGGCATCATTCTTCTAAGTCAATCCCCTACTAAGCAATCTCAA  548

seq1  ATTCTCCCAAAGGAACTCTACCCTTCAGATAAGGCTTTGGCACCTTAAAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCCAAAGGAACTCTACCCTTCAGATAAGGCTTTGGCACCTTAAAA  598

seq1  AAAGTTCCTTGTTAACACTTAAAGTTGTCTATGACATATAATTTAGTATA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCCTTGTTAACACTTAAAGTTGTCTATGACATATAATTTAGTATA  648

seq1  TTAACCAGCCTTTCATGGCTCTCATGAAAAAGCTGACACGGGCTAAATTT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCAGCCTTTCATGGCTCTCATGAAAAAGCTGACACGGGCTAAATTT  698

seq1  ATAAGGGAAAGAGATTTGCGTATCTCACTTGTGGAGGTTTAAAATTCAAA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGGAAAGAGATTTGCGTATCTCACTTGTGGAGGTTTAAAATTCAAA  748

seq1  CAAATGCTATGGGCCTTGGTGATGCCATCACTGAAGCACTTCATAGGGAG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCTATGGGCCTTGGTGATGCCATCACTGAAGCACTTCATAGGGAG  798

seq1  ATGCATCAGAGGAGAGTTGTGGATCAAGGGTCATATCTCAAAGCAGAGTG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATCAGAGGAGAGTTGTGGATCAAGGGTCATATCTCAAAGCAGAGTG  848

seq1  CTGAGGGGGATTTCCCAGCAAGGTTATCGTAAGTTGATCCAGAAAGGCAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGGGATTTCCCAGCAAGGTTATCGTAAGTTGATCCAGAAAGGCAA  898

seq1  TATGAAGAACACGTAAATCTTAAACCAATTTAAAGGGCACTCCTTCATGA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGAACACGTAAATCTTAAACCAATTTAAAGGGCACTCCTTCATGA  948

seq1  CCTAAAGGAGTGCCTGTCATTAGAGTTTCCAACCATCCCCTAATCTTTCT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAGGAGTGCCTGTCATTAGAGTTTCCAACCATCCCCTAATCTTTCT  998

seq1  ATCTGTAATAGCAAGCCTCCAACACTTGGACCTTCAGGAATACCTGTGGA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAATAGCAAGCCTCCAACACTTGGACCTTCAGGAATACCTGTGGA  1048

seq1  CAGTGATAATGTATCCAAAGTACTGAATTC  1071
      ||||||||||||||||||||||||||||||
seq2  CAGTGATAATGTATCCAAAGTACTGAATTC  1078