BAC Information

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BAC

Clone NameB6Ng01-164I09
Chromosome7 (Build37)
Map Location 109,085,107 - 109,250,690
singlet/doubletdoublet
Overlap geneLOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1
Upstream geneP2ry6, P2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2, Stard10, Centd2, Pde2a, Art2a, EG630138, Art2b, Clpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51
Downstream geneChrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164I09.bB6Ng01-164I09.g
ACCDH956825DH956826
length663856
definitionDH956825|Mus musculus domesticus DNA, BAC clone: B6Ng01-164I09, 5' end.DH956826|Mus musculus domesticus DNA, BAC clone: B6Ng01-164I09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,250,028 - 109,250,690)(109,085,107 - 109,085,661)
sequence
gaattctccctatttcatttcatttcattttatttttttttatcttattt
tattgagacagggtcttgttaggtatcccaggctggcctctaacttagtc
tctggcacaggagagctgaatccagcttaaaaatccctttccacaggcaa
gggagctgcatcccctatcctctgaccctcggttttcctttttctggccc
tcactcaacagttccttcagggaatatgaccccaaggctctcctcaaaaa
ccccaaacttccccacatccacaaaccttcctgggatccaaggatcccta
aaactattaataccatagattttaaatcaaaaaagttccctccctgctcc
ctatgcgaggaggtgaggtagccttctggccttacctagccttctccatg
gcgggcaaagctgacctggtctcctgggatagacagggcagggagggcag
ctttctcttttatactgtctattccctacccctcctgctgtcgccacaca
gctgctcagaaatgtgacactcgtctatttcaagctgtctccttgtcaag
gctcaggaacactagcctcaccccagtgtgacctgggccaaagctcttcc
caaaacaataagagctgccgaatacagaggtgtggagggcagtgttgggg
gtgttgaggagat
gaattcccttacctggtggggaatcttgggttcctttcagacattcttgt
tttgtctctgctgtagaagagttagggtgctgggttctgtactcagagcc
tcatggtgggcctcatcaaagatggtaggcgagattttaaatccttgggg
cagatgggtccaagtcagctgtctgctaatcctaagctctggatcgtgcc
attcaaaggcaaaggtcttgggcgccaagggtaagctgaagaaagcattc
tttaaatccagcactgtatatcattggcactcaggaggaagaacactcaa
gagggtgtagggattagggactgttgggtagatatccattaagctgcttg
tttacctctcttaagtcttgtaccagtctataatcattagttccaggctt
cttgattggcaggaggggagtgttcaggctaattgagatagtctcagggt
tcccgaatttaatagtctcttgatatggggggttataccttccctggcca
tcaggggcatggggtactgttggaactgtacaggctctaccccctgtttg
agctcaatccaaattggggtccgatgattagctgtaccaactcctcctgt
ctctgccccagcattggggaagcgatctaaccaaatggtaactcatcctc
tgaggtggggaggtctaaaaacccaactggtactgtccagccagagtggt
ggttaggacatgagtaggcttccccgatgaatcttatagtttggctccct
ctggggagaaatgtagttgtgccctcatttttgtcaacatatctctcccc
aagaaggttagaagcatttgtgtaaacaagtaccctgcccactcccgagt
ccactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_109250028_109250690
seq2: B6Ng01-164I09.b_46_708 (reverse)

seq1  ATCTCCTCAACACCCCCAACACTGCCCTCCACACCTCTGTATTCGGCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTCAACACCCCCAACACTGCCCTCCACACCTCTGTATTCGGCAGC  50

seq1  TCTTATTGTTTTGGGAAGAGCTTTGGCCCAGGTCACACTGGGGTGAGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTGTTTTGGGAAGAGCTTTGGCCCAGGTCACACTGGGGTGAGGCT  100

seq1  AGTGTTCCTGAGCCTTGACAAGGAGACAGCTTGAAATAGACGAGTGTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCCTGAGCCTTGACAAGGAGACAGCTTGAAATAGACGAGTGTCAC  150

seq1  ATTTCTGAGCAGCTGTGTGGCGACAGCAGGAGGGGTAGGGAATAGACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAGCAGCTGTGTGGCGACAGCAGGAGGGGTAGGGAATAGACAGT  200

seq1  ATAAAAGAGAAAGCTGCCCTCCCTGCCCTGTCTATCCCAGGAGACCAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGAGAAAGCTGCCCTCCCTGCCCTGTCTATCCCAGGAGACCAGGT  250

seq1  CAGCTTTGCCCGCCATGGAGAAGGCTAGGTAAGGCCAGAAGGCTACCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTGCCCGCCATGGAGAAGGCTAGGTAAGGCCAGAAGGCTACCTCA  300

seq1  CCTCCTCGCATAGGGAGCAGGGAGGGAACTTTTTTGATTTAAAATCTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCGCATAGGGAGCAGGGAGGGAACTTTTTTGATTTAAAATCTATG  350

seq1  GTATTAATAGTTTTAGGGATCCTTGGATCCCAGGAAGGTTTGTGGATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAATAGTTTTAGGGATCCTTGGATCCCAGGAAGGTTTGTGGATGTG  400

seq1  GGGAAGTTTGGGGTTTTTGAGGAGAGCCTTGGGGTCATATTCCCTGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGTTTGGGGTTTTTGAGGAGAGCCTTGGGGTCATATTCCCTGAAGG  450

seq1  AACTGTTGAGTGAGGGCCAGAAAAAGGAAAACCGAGGGTCAGAGGATAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTGAGTGAGGGCCAGAAAAAGGAAAACCGAGGGTCAGAGGATAGG  500

seq1  GGATGCAGCTCCCTTGCCTGTGGAAAGGGATTTTTAAGCTGGATTCAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCAGCTCCCTTGCCTGTGGAAAGGGATTTTTAAGCTGGATTCAGCT  550

seq1  CTCCTGTGCCAGAGACTAAGTTAGAGGCCAGCCTGGGATACCTAACAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTGCCAGAGACTAAGTTAGAGGCCAGCCTGGGATACCTAACAAGA  600

seq1  CCCTGTCTCAATAAAATAAGATAAAAAAAAATAAAATGAAATGAAATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTCAATAAAATAAGATAAAAAAAAATAAAATGAAATGAAATGAA  650

seq1  ATAGGGAGAATTC  663
      |||||||||||||
seq2  ATAGGGAGAATTC  663

seq1: chr7_109085107_109085661
seq2: B6Ng01-164I09.g_69_623

seq1  GAATTCCCTTACCTGGTGGGGAATCTTGGGTTCCTTTCAGACATTCTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTACCTGGTGGGGAATCTTGGGTTCCTTTCAGACATTCTTGT  50

seq1  TTTGTCTCTGCTGTAAAAGAGTTAGGGTGCTGGGTTCTGTACTCAGAGCC  100
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTGTCTCTGCTGTAGAAGAGTTAGGGTGCTGGGTTCTGTACTCAGAGCC  100

seq1  TCATGGTGGGCCTCATCAAAGATGGTAGGCGAGATTTTAAATCCTTGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTGGGCCTCATCAAAGATGGTAGGCGAGATTTTAAATCCTTGGGG  150

seq1  CAGATGGGTCCAAGTCAGCTGTCTGCTAATCCTAAGCTCTGGATCGTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGGTCCAAGTCAGCTGTCTGCTAATCCTAAGCTCTGGATCGTGCC  200

seq1  ATTCAAAGGCAAAGGTCTTGGGCGCCAAGGGTAAGCTGAAGAAAGCATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAGGCAAAGGTCTTGGGCGCCAAGGGTAAGCTGAAGAAAGCATTC  250

seq1  TTTAAATCCAGCACTGTATATCATTGGCACTCAGGAGGAAGAACACTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATCCAGCACTGTATATCATTGGCACTCAGGAGGAAGAACACTCAA  300

seq1  GAGGGTGTAGGGATTAGGGACTGTTGGGTAGATATCCATTAAGCTGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTGTAGGGATTAGGGACTGTTGGGTAGATATCCATTAAGCTGCTTG  350

seq1  TTTACCTCTCTTAAGTCTTGTACCAGTCTATAATCATTAGTTCCAGGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTCTCTTAAGTCTTGTACCAGTCTATAATCATTAGTTCCAGGCTT  400

seq1  CTTGATTGGCAGGAGGGGAGTGTTCAGGCTAATTGAGATAGTCTCAGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTGGCAGGAGGGGAGTGTTCAGGCTAATTGAGATAGTCTCAGGGT  450

seq1  TCCCGAATTTAATAGTCTCTTGATATGGGGGGTTATACCTTCCCTGGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAATTTAATAGTCTCTTGATATGGGGGGTTATACCTTCCCTGGCCA  500

seq1  TCAGGGGCATGGGGTACTGTTGGAACTGTACAGGCTCTACCCCCTGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGCATGGGGTACTGTTGGAACTGTACAGGCTCTACCCCCTGTTTG  550

seq1  AGCTC  555
      |||||
seq2  AGCTC  555