BAC Information

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BAC

Clone NameB6Ng01-164I17
Chromosome7 (Build37)
Map Location 125,527,822 - 125,641,313
singlet/doubletdoublet
Overlap geneSyt17, LOC100042845, E030018N11Rik
Upstream geneXylt1, LOC669758, Rps15a, Arl6ip1, 2610207I05Rik, LOC100043339
Downstream geneCoq7, Tmc7, B230311B06Rik, Tmc5, Mir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b, Gpr139, LOC100042871, Gp2, Umod, 1700007B13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164I17.bB6Ng01-164I17.g
ACCDH956839DH956840
length1,116236
definitionDH956839|Mus musculus domesticus DNA, BAC clone: B6Ng01-164I17, 5' end.DH956840|Mus musculus domesticus DNA, BAC clone: B6Ng01-164I17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,640,177 - 125,641,313)(125,527,822 - 125,528,058)
sequence
gaattcttagttatcagggagtgggctctttgaaaggattagaaggatta
ggaggtgtgtatgtaacctaagtactgacagaacagggagcttcagggag
gagaggagagagcacaggagagatatccgagtgtgtggctctttctgcag
gatcttagagattacagatgttctagggggtttattctgaacaaaaaaga
agtgtgtcaagtttcagaagagagcccatgtggttttctcaggttgtaga
aaagctactctggcgactgtgttatgaatggaggaccccgcaggggactg
caggagcaaagcagggaggaagacagatggctttgactacattggtggag
aggactctagttgaggctgtagcaaacaagtcttagaaatgactgagcac
tgactacccagcactctagttcttcttgcccttgtcattttgccttgaac
aaaatagaagttcattcttagacctaaatttggacatgttctccactcag
acctgccagctcaacagaccagagaatctacatgcctttgctgtttgaac
atgaaatgtcctccactggttcatatgtcatggtgccaagttggtctcac
tgttctaggaggttctagaaactttaggaagtgggacctagctggaagaa
tgtaggtcactggggtatgattgtaaaggggatacatggtctctgctttg
tatcctgcccaccattagatgaagcacacaccccccacctcccaccactg
tgttattccttaactcctcccactttgctatggcccaggaacggagccca
gtgaccactgaaccctcaaggctgtgatcagagacaaggaacccaaatag
ttttgatggtgcacagcttagactcacacttggaaggctgaggcaggcag
gtcttatgagtctgaggcagcctggtctgcatagcagttcaggacagcca
ggatatataaagacaccttgtctcaaaaaataaaattaaaaaaaaggaga
gaagagagacgaggagaaatcttttctttagttatctatcatgtaatact
ctatacaaatagtgtatactttgcccccagcctcaaggtgaaaggcacaa
atcttatgagactctc
caagtaataaacaaggggggttgggagaggaaaagtgtaaacacaaaatc
aagaacgccatccaatatctgaaaaccaaaatacctattgaaacagggca
ggagaaacacaatgcttgctcaagggtgtctggtacttgtcagctctggg
ggtggggggggggactgaaacatgtatactttctatacagctggtaatga
gctgggggtcctagatagacctcattacatgaatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_125640177_125641313
seq2: B6Ng01-164I17.b_40_1155 (reverse)

seq1  GAGAGGTCTCATGTAGATTTGTTGCCCTTCACCTTGAGCTTGGGGGCAAA  50
      |||| |||||||  ||||||| |||| |||||||||||  ||||||||||
seq2  GAGA-GTCTCAT-AAGATTTG-TGCCTTTCACCTTGAGGCTGGGGGCAAA  47

seq1  GTATTAACTATTTGTATAGAGTATTACATGGATAGGATAACTTACAGAAA  100
      ||||  ||||||||||||||||||||||| |||| ||||||| |   |||
seq2  GTATACACTATTTGTATAGAGTATTACAT-GATA-GATAACTAAAGAAAA  95

seq1  GATTTCTTCTTCCTTCTCCTCTTCCTCTTCCTTTTTTTTTTAATTTTTAT  150
      ||||||| ||  | ||| ||||| |||| |   ||||||||||||||   
seq2  GATTTCTCCT--CGTCT-CTCTT-CTCTCC---TTTTTTTTAATTTT--A  136

seq1  TTTTTTGAGACAGGGTGTCTTTATATATTCCTGGCTGTCCTGAAACTTGC  200
      |||||||||||| |||||||||||||| ||||||||||||||||   |||
seq2  TTTTTTGAGACAAGGTGTCTTTATATA-TCCTGGCTGTCCTGAA--CTGC  183

seq1  TATGCAGACCAGGCTGGCCTCAGACTCATAAAGACCTGCCTGCCTCAGCC  250
      ||||||||||||||| ||||||||||||| ||||||||||||||||||||
seq2  TATGCAGACCAGGCT-GCCTCAGACTCAT-AAGACCTGCCTGCCTCAGCC  231

seq1  TTCCAAGTGTGGGTCTAAAGCTGTGCACCATCAAAACTATTTGGGTTTCC  300
      ||||||||||| |||| |||||||||||||||||||||||||||| ||||
seq2  TTCCAAGTGTGAGTCT-AAGCTGTGCACCATCAAAACTATTTGGG-TTCC  279

seq1  TTGTCTCTGATCACAGCCTTGAGGGTTCAGTGGTCACTGGGCTCCGTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTGATCACAGCCTTGAGGGTTCAGTGGTCACTGGGCTCCGTTCC  329

seq1  TGGGCCATAGCAAAGTGGGAGGAGTTAAGGAATAACACAGTGGTGGGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCATAGCAAAGTGGGAGGAGTTAAGGAATAACACAGTGGTGGGAGG  379

seq1  TGGGGGGTGTGTGCTTCATCTAATGGTGGGCAGGATACAAAGCAGAGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGGTGTGTGCTTCATCTAATGGTGGGCAGGATACAAAGCAGAGACC  429

seq1  ATGTATCCCCTTTACAATCATACCCCAGTGACCTACATTCTTCCAGCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCCCCTTTACAATCATACCCCAGTGACCTACATTCTTCCAGCTAG  479

seq1  GTCCCACTTCCTAAAGTTTCTAGAACCTCCTAGAACAGTGAGACCAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCACTTCCTAAAGTTTCTAGAACCTCCTAGAACAGTGAGACCAACTT  529

seq1  GGCACCATGACATATGAACCAGTGGAGGACATTTCATGTTCAAACAGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCATGACATATGAACCAGTGGAGGACATTTCATGTTCAAACAGCAA  579

seq1  AGGCATGTAGATTCTCTGGTCTGTTGAGCTGGCAGGTCTGAGTGGAGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGTAGATTCTCTGGTCTGTTGAGCTGGCAGGTCTGAGTGGAGAAC  629

seq1  ATGTCCAAATTTAGGTCTAAGAATGAACTTCTATTTTGTTCAAGGCAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCAAATTTAGGTCTAAGAATGAACTTCTATTTTGTTCAAGGCAAAA  679

seq1  TGACAAGGGCAAGAAGAACTAGAGTGCTGGGTAGTCAGTGCTCAGTCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGGGCAAGAAGAACTAGAGTGCTGGGTAGTCAGTGCTCAGTCATT  729

seq1  TCTAAGACTTGTTTGCTACAGCCTCAACTAGAGTCCTCTCCACCAATGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGACTTGTTTGCTACAGCCTCAACTAGAGTCCTCTCCACCAATGTA  779

seq1  GTCAAAGCCATCTGTCTTCCTCCCTGCTTTGCTCCTGCAGTCCCCTGCGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGCCATCTGTCTTCCTCCCTGCTTTGCTCCTGCAGTCCCCTGCGG  829

seq1  GGTCCTCCATTCATAACACAGTCGCCAGAGTAGCTTTTCTACAACCTGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTCCATTCATAACACAGTCGCCAGAGTAGCTTTTCTACAACCTGAG  879

seq1  AAAACCACATGGGCTCTCTTCTGAAACTTGACACACTTCTTTTTTGTTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCACATGGGCTCTCTTCTGAAACTTGACACACTTCTTTTTTGTTCA  929

seq1  GAATAAACCCCCTAGAACATCTGTAATCTCTAAGATCCTGCAGAAAGAGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAACCCCCTAGAACATCTGTAATCTCTAAGATCCTGCAGAAAGAGC  979

seq1  CACACACTCGGATATCTCTCCTGTGCTCTCTCCTCTCCTCCCTGAAGCTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTCGGATATCTCTCCTGTGCTCTCTCCTCTCCTCCCTGAAGCTC  1029

seq1  CCTGTTCTGTCAGTACTTAGGTTACATACACACCTCCTAATCCTTCTAAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCTGTCAGTACTTAGGTTACATACACACCTCCTAATCCTTCTAAT  1079

seq1  CCTTTCAAAGAGCCCACTCCCTGATAACTAAGAATTC  1137
      |||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAAAGAGCCCACTCCCTGATAACTAAGAATTC  1116

seq1: chr7_125527822_125528058
seq2: B6Ng01-164I17.g_73_308

seq1  CAAGTAATAAACAAGGGGGGTTGGGAGAGGAAAAGTGTAAACACAAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAATAAACAAGGGGGGTTGGGAGAGGAAAAGTGTAAACACAAAATC  50

seq1  AAGAACGCCATCCAATATCTGAAAACCAAAATACCTATTGAAACAGGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACGCCATCCAATATCTGAAAACCAAAATACCTATTGAAACAGGGCA  100

seq1  GGAGAAACACAATGCTTGCTCAAGGGTGTCTGGTACTTGTCAGCTCTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAACACAATGCTTGCTCAAGGGTGTCTGGTACTTGTCAGCTCTGGG  150

seq1  GGTGGGGGGGGGGACTGAAACATGTATACTTTCTATACAGCTGGTAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGGGGGGGACTGAAACATGTATACTTTCTATACAGCTGGTAATGA  200

seq1  GCTTGGGGTCCATAGATAGACCTCATTACATGAATGT  237
      ||| ||||||| |||||||||||||||||||||||||
seq2  GCTGGGGGTCC-TAGATAGACCTCATTACATGAATGT  236