BAC Information

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BAC

Clone NameB6Ng01-165I07
Chromosome7 (Build37)
Map Location 72,380,102 - 72,550,650
singlet/doubletdoublet
Overlap geneTjp1
Upstream geneTrpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee, Apba2, 5730507A09Rik, Ndnl2
Downstream geneGm1693, EG665234, Tarsl2, Tm2d3, LOC665241, Pcsk6, Snrpa1, H47, Chsy1, Lrrk1, Aldh1a3
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165I07.bB6Ng01-165I07.g
ACCDH957556DH957557
length1,033778
definitionDH957556|Mus musculus domesticus DNA, BAC clone: B6Ng01-165I07, 5' end.DH957557|Mus musculus domesticus DNA, BAC clone: B6Ng01-165I07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,550,056 - 72,550,650)(72,380,102 - 72,380,879)
sequence
gaattcccattttgatatgtgcttactacatatctttacatatttttata
gcctccaaatagttctctactttgtagttagaataccccatgtagtcact
caggaggcagaggcaggtagatctctgagttccaagccagtcgggtctat
agggtcagatctaggactgtactggctggctttgtgtgtcaacttgacac
aagctggagttatcacagaaaaaggagcctcccttgaggaaatgcctcca
tgagacccagctgtaaggcattttctcaattagtgatcaaggagtgggag
ggccaattgtgtgaggtgccatccctgagctggtagtcctgggttctata
agaaagcaagttgggaaagccaggggaagcaagccagtaaataatatcct
tccgtggtctctgcatcagctcctgcttcctgacctgcttgagttcaatc
ctggcttcctgtggtgatgaacagcaatgtggacctgtaagctgaataaa
ccctttcctccccaacttgcttcttggtcatgatgtttgtgcaggaatag
aaaccctaagacaaacagctacacaaaagctacccagagaaattgtcttt
aaaaaattccccatctataaaaatgagttcagtgtgtttgtctctctaat
gttaacttgaattttcaatcccattagatatagttgaagtagtaatccat
agcttttagccattttgcccacaaggaaccgagaggttcagtggttgatg
tctactgggatccaggtcctacactgttagaattagaccgtcacagaagg
cagagaagactctggtttctagccttgcctttcccactgtgaccctgtgt
gcatcatgtggcatctggttccccttatttgttaaaacaaaggatgtgga
tttatggtttctgaattcttgtccaggctcagaggctcttgaagacagct
gccctttacagatacctcacagccgtttgttagggggaccaattctctct
atgtaccctggctgtccttaatttgggctgttc
gaattctgcttgctgaatgagtcaccactctgttggttatttcagctcca
acatctgtcctgtaagagtaagttctctaggagactgcctgctaggaacc
ccagaattctgtgcagaggttggaacctccaaccctccactttctctgag
atgagaggacatacacaccagctttccaatggctttgaggcttggggtag
gagaagcattgattccaatgcttcaaatattatttgtatcccattagtga
tcaataagacttaaaattatttttggtgctaagaattgaactcagggcct
cgagtatatagggcccgtgttccaccgttgagctatgaaccatccttcca
gaagatacatttttatgctaaatcagtaagtcaacttatgcatagtaatt
caaaaaccacatttgattttggagttagggacagttgaatgtatttatta
taacatcgggatggcagtaagcagtgttttatacaacaactcaatcaaag
caggaaagcaaagaacaaaaatagatgagtgggtcgggaaacgctgagcc
tcagtaagtgtgtgcatagctttgcaatcagacattgcagaaattagcta
ttttaatattcctatgcacagaagccttgacaagtgggtgtgggttttgt
gatgggctccatgcccatcctcctaggttctgtcagttgcagggttggta
cttcccactcctgaccagacacctctggtgctgtgggggaggaggcccca
attatgagatcgttagatgttccttcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_72550056_72550650
seq2: B6Ng01-165I07.b_42_636 (reverse)

seq1  CAATTTCTCTGGGTAGCTTTTGTGTAGCTGTTTGTCTTAGGGTTTCTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCTCTGGGTAGCTTTTGTGTAGCTGTTTGTCTTAGGGTTTCTATT  50

seq1  CCTGCACAAACATCATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACAAACATCATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTAT  100

seq1  TCAGCTTACAGGTCCACATTGCTGTTCATCACCACAGGAAGCCAGGATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTACAGGTCCACATTGCTGTTCATCACCACAGGAAGCCAGGATTG  150

seq1  AACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGACCACGGAAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGACCACGGAAGGAT  200

seq1  ATTATTTACTGGCTTGCTTCCCCTGGCTTTCCCAACTTGCTTTCTTATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTACTGGCTTGCTTCCCCTGGCTTTCCCAACTTGCTTTCTTATAG  250

seq1  AACCCAGGACTACCAGCTCAGGGATGGCACCTCACACAATTGGCCCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGGACTACCAGCTCAGGGATGGCACCTCACACAATTGGCCCTCCC  300

seq1  ACTCCTTGATCACTAATTGAGAAAATGCCTTACAGCTGGGTCTCATGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTGATCACTAATTGAGAAAATGCCTTACAGCTGGGTCTCATGGAG  350

seq1  GCATTTCCTCAAGGGAGGCTCCTTTTTCTGTGATAACTCCAGCTTGTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCCTCAAGGGAGGCTCCTTTTTCTGTGATAACTCCAGCTTGTGTC  400

seq1  AAGTTGACACACAAAGCCAGCCAGTACAGTCCTAGATCTGACCCTATAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGACACACAAAGCCAGCCAGTACAGTCCTAGATCTGACCCTATAGA  450

seq1  CCCGACTGGCTTGGAACTCAGAGATCTACCTGCCTCTGCCTCCTGAGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGACTGGCTTGGAACTCAGAGATCTACCTGCCTCTGCCTCCTGAGTGA  500

seq1  CTACATGGGGTATTCTAACTACAAAGTAGAGAACTATTTGGAGGCTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGGGGTATTCTAACTACAAAGTAGAGAACTATTTGGAGGCTATAA  550

seq1  AAATATGTAAAGATATGTAGTAAGCACATATCAAAATGGGAATTC  595
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTAAAGATATGTAGTAAGCACATATCAAAATGGGAATTC  595

seq1: chr7_72380102_72380879
seq2: B6Ng01-165I07.g_72_849

seq1  GAATTCTGCTTGCTGAATGAGTCACCACTCTGTTGGTTATTTCAGCTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTTGCTGAATGAGTCACCACTCTGTTGGTTATTTCAGCTCCA  50

seq1  ACATCTGTCCTGTAAGAGTAAGTTCTCTAGGAGACTGCCTGCTAGGAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGTCCTGTAAGAGTAAGTTCTCTAGGAGACTGCCTGCTAGGAACC  100

seq1  CCAGAATTCTGTGCAGAGGTTGGAACCTCCAACCCTCCACTTTCTCTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATTCTGTGCAGAGGTTGGAACCTCCAACCCTCCACTTTCTCTGAG  150

seq1  ATGAGAGGACATACACACCAGCTTTCCAATGGCTTTGAGGCTTGGGGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGGACATACACACCAGCTTTCCAATGGCTTTGAGGCTTGGGGTAG  200

seq1  GAGAAGCATTGATTCCAATGCTTCAAATATTATTTGTATCCCATTAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCATTGATTCCAATGCTTCAAATATTATTTGTATCCCATTAGTGA  250

seq1  TCAATAAGACTTAAAATTATTTTTGGTGCTAAGAATTGAACTCAGGGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAGACTTAAAATTATTTTTGGTGCTAAGAATTGAACTCAGGGCCT  300

seq1  CGAGTATATAGGGCCCGTGTTCCACCGTTGAGCTATGAACCATCCTTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTATATAGGGCCCGTGTTCCACCGTTGAGCTATGAACCATCCTTCCA  350

seq1  GAAGATACATTTTTATGCTAAATCAGTAAGTCAACTTATGCATAGTAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATACATTTTTATGCTAAATCAGTAAGTCAACTTATGCATAGTAATT  400

seq1  CAAAAACCACATTTGATTTTGGAGTTAGGGACAGTTGAATGTATTTATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACCACATTTGATTTTGGAGTTAGGGACAGTTGAATGTATTTATTA  450

seq1  TAACATCGGGATGGCAGTAAGCAGTGTTTTATACAACAACTCAATCAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATCGGGATGGCAGTAAGCAGTGTTTTATACAACAACTCAATCAAAG  500

seq1  CAGGAAAGCAAAGAACAAAAATAGATGAGTGGGTCGGGAAACGCTGAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGCAAAGAACAAAAATAGATGAGTGGGTCGGGAAACGCTGAGCC  550

seq1  TCAGTAAGTGTGTGCATAGCTTTGCAATCAGACATTGCAGAAATTAGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAGTGTGTGCATAGCTTTGCAATCAGACATTGCAGAAATTAGCTA  600

seq1  TTTTAATATTCCTATGCACAGAAGCCTTGACAAGTGGGTGTGGGTTTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATATTCCTATGCACAGAAGCCTTGACAAGTGGGTGTGGGTTTTGT  650

seq1  GATGGGCTCCATGCCCATCCTCCTAGGTTCTGTCAGTTGCAGGGTTGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGCTCCATGCCCATCCTCCTAGGTTCTGTCAGTTGCAGGGTTGGTA  700

seq1  CTTCCCACTCCTGACCAGACACCTCTGGTGCTGTGGGGGAGGAGGCCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCACTCCTGACCAGACACCTCTGGTGCTGTGGGGGAGGAGGCCCCA  750

seq1  AGTATGAGATCGTTAGATGTCTCTTCAA  778
      | ||||||||||||||||||  ||||||
seq2  ATTATGAGATCGTTAGATGTTCCTTCAA  778