BAC Information

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BAC

Clone NameB6Ng01-165P05
Chromosome7 (Build37)
Map Location 147,469,759 - 147,470,147
singlet/doubletsinglet
Overlap gene5830411N06Rik
Upstream geneInpp5a, Nkx6-2, E030019B06Rik, 9330101J02Rik, LOC100043472, EG434253, EG664869, Gpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik
Downstream geneEG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60, GA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531, Olfr532, Olfr533, Olfr534-ps1, Olfr535, Olfr536, Olfr537-ps1, Olfr1523-ps1, Olfr538, Olfr1553-ps1, Olfr46, Olfr61, Olfr53, Olfr539, GA_x5J8B7W3EKE-4574231-4574913, Olfr45, Olfr541, GA_x5J8B7W3EKE-4522784-4521912, Cyp2e1, Syce1, LOC100043529, BC066028, 1190003J15Rik, Scgb1c1, Odf3, Bet1l, Ric8, Sirt3, Psmd13, LOC100043546, Cox8b, Nlrp6, Athl1, Ifitm5, Ifitm2, Ifitm1, LOC665143, Ifitm3, Ifitm6, B4galnt4, Pkp3, Sigirr, Trp53i5, Ptdss2, Rnh1, LOC546015, Hras1, Lrrc56, 1600016N20Rik, Rassf7, AA673488, Irf7, Mucdhl, Sct
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165P05.bB6Ng01-165P05.g
ACCDH957867DH957868
length508383
definitionDH957867|Mus musculus domesticus DNA, BAC clone: B6Ng01-165P05, 5' end.DH957868|Mus musculus domesticus DNA, BAC clone: B6Ng01-165P05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttttctttattggagtatcagtgagtgtacaaaccaaaattgagggaggt
ctcatgcccagcagtaaatgagcaacacaaaataatagtggtttgggagg
tcttttgcctcaatgtgttgtttgagccttaaaaacaaacaaacaaacaa
acaaaaacaacttgttctttattcatctataacagtctaattttgtgttt
ctaagagttatgtgtgtgcatgtctctgggtgtgtaggtgtatcttgtgg
tttttcttgtatccttctctcctgtttttctgtttgctttgttttactct
ggtttgtttatttgtctgttttttttttttttttttttagaaagtgaaag
aatcgaggcatgttggtgttgagggaggggaaacaatgatctgaatacac
tgtatataaaagtttattttcaagaaaaaaaaaagaaaaagaagacaaaa
atgaaaggaaggaaggagagggaggaaaagagaggaagtggagagagggg
gataggga
tttcttttaacatgtatcaggtgtgagaatctatcctgccttagataagg
ccaatgcaggttctgggtgaccagagctaggccaggtaaagctggtgagt
gagctgtgtaattggatctggcaaagacaactcccaaaccttgggtctgg
agctcagcctgtaggtatagagataatcacgggtggagggaaggatatta
gagaaaggggcatctcaccagtcaaaggtgggtcacaaacaaagtaggtt
tgaagatctatatcagggacctcggcttgtggctgtgcgtgtgatgatgc
acagaggagaaatttcaattacaggatcagtaggatgtgaatccttactg
gaggaagtgtcaccagtgggggtgggggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_147469759_147470147
seq2: B6Ng01-165P05.g_69_457

seq1  GAATTCTTTCTTTTAACATGTATCAGGTGTGAGAATCTATCCTGCCTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTTTAACATGTATCAGGTGTGAGAATCTATCCTGCCTTAG  50

seq1  ATAAGGCCAATGCAGGTTCTGGGTGACCAGAGCTAGGCCAGGTAAAGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCCAATGCAGGTTCTGGGTGACCAGAGCTAGGCCAGGTAAAGCTG  100

seq1  GTGAGTGAGCTGTGTAATTGGATCTGGCAAAGACAACTCCCAAACCTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGAGCTGTGTAATTGGATCTGGCAAAGACAACTCCCAAACCTTGG  150

seq1  GTCTGGAGCTCAGCCTGTAGGTATAGAGATAATCACGGGTGGAGGGAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGAGCTCAGCCTGTAGGTATAGAGATAATCACGGGTGGAGGGAAGG  200

seq1  ATATTAGAGAAAGGGGCATCTCACCAGTCAAAGGTGGGTCACAAACAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGAGAAAGGGGCATCTCACCAGTCAAAGGTGGGTCACAAACAAAG  250

seq1  TAGGTTTGAAGATCTATATCAGGGACCTCGGCTTGTGGCTGTGCGTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTGAAGATCTATATCAGGGACCTCGGCTTGTGGCTGTGCGTGTGA  300

seq1  TGATGCACAGAGGAGAAATTTCAATTACAGGATCAGTAGGATGTGAATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCACAGAGGAGAAATTTCAATTACAGGATCAGTAGGATGTGAATCC  350

seq1  TTACTGGAGGAAGTGTCACCAGTGGGGGTGGGGGTGGGG  389
      |||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGAGGAAGTGTCACCAGTGGGGGTGGGGGTGGGG  389