BAC Information

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BAC

Clone NameB6Ng01-166A06
Chromosome7 (Build37)
Map Location 102,666,528 - 102,820,238
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666816, LOC100040132, LOC666823
Downstream geneFrda-ps, EG666836, Odz4, LOC670727, LOC666858
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166A06.bB6Ng01-166A06.g
ACCDH957915DH957916
length1,154841
definitionDH957915|Mus musculus domesticus DNA, BAC clone: B6Ng01-166A06, 5' end.DH957916|Mus musculus domesticus DNA, BAC clone: B6Ng01-166A06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,666,528 - 102,667,697)(102,819,398 - 102,820,238)
sequence
gaattcccatggggtgattgagaaaatagtgttgaaaaaactgttctgtg
tggggaacatattatctacctacacactagaagcacttcactggaaggtc
ttgttctgtgggatttcagaaagttccattccatggaatctcaaaataaa
atctccaccccccccccattttaattaagttctttgctaaaagtgagcac
atagaaaagtgtggaatggatgaatgaacatcaccaagagaagaactgag
agagggagttaaatttttcttttaattgtccagagtttatcccaagtcag
tacttctctaccatccttccaaggaccttctacactactatctctaacat
ttttctgcatcatgaactttcctgggcattttcacatacattagagatgc
ctggtgcttgctccataatgttactctaaatttctaattttactattata
aagaatttataagaataaaaaatatattttttgattattcacacaaaatc
atgttacactattttccagacctctagattgcaatgacttttgaactact
caacttcaagtaactatcacatggctaccctctaggtatggtcattcctt
aggcttctttattctaaataaaccagatattatactttctgaccatcaga
cctttcagttcttgtctgagtggttcctatactgaaactatactaaaacc
cccatactgaaactatttctactatccaaacacccttgacagcccaggga
tttgtacacttaaaaatcatgaggtcattgaaggattttttttttaattc
taaaatcaaatgaaaataaaatcacagcttcctagaatagaacttcaaat
tcagattaaaagagagtgacctgatatgctagaacatctcatgaaggata
ttcatcccatcagaattctaattagcaatgaggtatcaagtagacaggag
gggccataaaatatagtccatcctgtctgtctttgaaatcctctggacta
tatgtgctctgaggatcactatttggttgtttttgttagtctttcttcaa
cacccctgttctcatcttgggtgttttatcttatactcagtgctaattga
ccaacacacaggtactgtcagcacctgtggcttgcccatggacagaattg
ttca
gaattcatttattttttttctcagaatgctccatttcataatgagtggta
cttggcagatatttatgagttttcatgtacccttgttttcagtaggtacc
acacccttgtttaccttgtgctttctcagagctgttttagccagtgttat
tctgaacttctggcactggagtggatctagagttgcagaagtaactcctt
gaagatttcttatgagaattaaaatcttaaagtcatcaccaacttggccc
tggaacccagcttccttgatgttattgataaagaagaagggtcacaaatg
tgcaaaagctttaattgaacaaatgctaggacatgagaatattggatgtt
attgtcaggagaggtttgtgcacatcatggggagttcatggatgctagag
gaccggtatctacactgtgctgcatgccgcctcctcctctcatctggtat
aacaacctggctgaagtaacaggtcacaaactaaagtaagaaagatgact
cagattacaaattatcaatgctgagaagaacttttgaaacatgacactgc
cttgtagatgaggaaattgaatcccagaaaaacttagagatttttcccaa
gggcacagagtatgaggcagaagcagggtgtgaagagatggctcaggcgg
taagagcacttgttcttatagaagagctggattcctttcccagaacccac
atagtgacttacaactatttgtaatgcaagtttcagggaatttgatgact
tttttctgacctccacagatatattgacgggccacaggtatttgtataca
tgcagataaagattatatatatgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_102666528_102667697
seq2: B6Ng01-166A06.b_45_1198

seq1  GAATTCCCATGGGGTGATTGAGAAAATAGTGTTGAAAAAACTGTTCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATGGGGTGATTGAGAAAATAGTGTTGAAAAAACTGTTCTGTG  50

seq1  TGGGGAACATATTATCTACCTACACACTAGAAGCACTTCACTGGAAGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAACATATTATCTACCTACACACTAGAAGCACTTCACTGGAAGGTC  100

seq1  TTGTTCTGTGGGATTTCAGAAAGTTCCATTCCATGGAATCTCAAAATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTGTGGGATTTCAGAAAGTTCCATTCCATGGAATCTCAAAATAAA  150

seq1  ATCTCCACCCCCCCCCCATTTTAATTAAGTTCTTTGCTAAAAGTGAGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCACCCCCCCCCCATTTTAATTAAGTTCTTTGCTAAAAGTGAGCAC  200

seq1  ATAGAAAAGTGTGGAATGGATGAATGAACATCACCAAGAGAAGAACTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAAGTGTGGAATGGATGAATGAACATCACCAAGAGAAGAACTGAG  250

seq1  AGAGGGAGTTAAATTTTTCTTTTAATTGTCCAGAGTTTATCCCAAGTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAGTTAAATTTTTCTTTTAATTGTCCAGAGTTTATCCCAAGTCAG  300

seq1  TACTTCTCTACCATCCTTCCAAGGACCTTCTACACTACTATCTCTAACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTCTACCATCCTTCCAAGGACCTTCTACACTACTATCTCTAACAT  350

seq1  TTTTCTGCATCATGAACTTTCCTGGGCATTTTCACATACATTAGAGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGCATCATGAACTTTCCTGGGCATTTTCACATACATTAGAGATGC  400

seq1  CTGGTGCTTGCTCCATAATGTTACTCTAAATTTCTAATTTTACTATTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCTTGCTCCATAATGTTACTCTAAATTTCTAATTTTACTATTATA  450

seq1  AAGAATTTATAAGAATAAAAAATATATTTTTTGATTATTCACACAAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTATAAGAATAAAAAATATATTTTTTGATTATTCACACAAAATC  500

seq1  ATGTTACACTATTTTCCAGACCTCTAGATTGCAATGACTTTTGAACTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACACTATTTTCCAGACCTCTAGATTGCAATGACTTTTGAACTACT  550

seq1  CAACTTCAAGTAACTATCACATGGCTACCCTCTAGGTATGGTCATTCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCAAGTAACTATCACATGGCTACCCTCTAGGTATGGTCATTCCTT  600

seq1  AGGCTTCTTTATTCTAAATAAACCAGATATTATACTTTCTGACCATCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCTTTATTCTAAATAAACCAGATATTATACTTTCTGACCATCAGA  650

seq1  CCTTTCAGTTCTTGTCTGAGTGGTTCCTATACTGAAACTATACTAAAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAGTTCTTGTCTGAGTGGTTCCTATACTGAAACTATACTAAAACC  700

seq1  CCCATACTGAAACTATTTCTACTATCCAAACACCCTTGACAGCCCAGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACTGAAACTATTTCTACTATCCAAACACCCTTGACAGCCCAGGGA  750

seq1  TTTGTACACTTAAAAATCATGAGGTCATTGAAGGATTTTTTTTTTAATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACACTTAAAAATCATGAGGTCATTGAAGGATTTTTTTTTTAATTC  800

seq1  TAAAATCAAATGAAAATAAAATCACAGCTTCCTAGAATAGAACTTCAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCAAATGAAAATAAAATCACAGCTTCCTAGAATAGAACTTCAAAT  850

seq1  TCAGATTAAAAGAGAGTGACCTGATATGCTAGAACATCTCATGAAGGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTAAAAGAGAGTGACCTGATATGCTAGAACATCTCATGAAGGATA  900

seq1  TTCATCCCATCAGAATTCTAATTAGCAATGAGGTATCAAGTAGACAGGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCCATCAGAATTCTAATTAGCAATGAGGTATCAAGTAGACAGGAG  950

seq1  GGGCCATAAAATATAGTCCATCCTGTCTTGTCTTTGAAAATCCTCTGGAC  1000
      ||||||||||||||||||||||||||| |||||||| |||||||||||| 
seq2  GGGCCATAAAATATAGTCCATCCTGTC-TGTCTTTG-AAATCCTCTGGA-  997

seq1  CTATTATGTGCCTCTTGAGGGATTCACCTATTTGGTTGTTTTTGTTTAGT  1050
      ||| |||||| ||| |||||   ||| ||||||||||||||||| |||||
seq2  CTA-TATGTG-CTC-TGAGG--ATCA-CTATTTGGTTGTTTTTG-TTAGT  1040

seq1  CTTTCTTCAACACCCCTTGTTCCTCCATCTTGGGTGTTTTATCCTTATAC  1100
      |||||||||||||||| |||||   ||||||||||||||||| |||||||
seq2  CTTTCTTCAACACCCC-TGTTC--TCATCTTGGGTGTTTTAT-CTTATAC  1086

seq1  TCAAGTGCTATATGA-CAACACACAGGTACTGTCAGCA-CTGTTGCTTGC  1148
      || |||||||  ||| |||||||||||||||||||||| |||| ||||||
seq2  TC-AGTGCTAATTGACCAACACACAGGTACTGTCAGCACCTGTGGCTTGC  1135

seq1  CACATGGCACCAGAATTGTTCA  1170
      | |||||   ||||||||||||
seq2  C-CATGG--ACAGAATTGTTCA  1154

seq1: chr7_102819398_102820238
seq2: B6Ng01-166A06.g_68_908 (reverse)

seq1  CACACACACACACACACACATATATATAATCTTTATCTGCATGTATACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACATATATATAATCTTTATCTGCATGTATACAA  50

seq1  ATACCTGTGGCCCGTCAATATATCTGTGGAGGTCAGAAAAAAGTCATCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGTGGCCCGTCAATATATCTGTGGAGGTCAGAAAAAAGTCATCAA  100

seq1  ATTCCCTGAAACTTGCATTACAAATAGTTGTAAGTCACTATGTGGGTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTGAAACTTGCATTACAAATAGTTGTAAGTCACTATGTGGGTTCT  150

seq1  GGGAAAGGAATCCAGCTCTTCTATAAGAACAAGTGCTCTTACCGCCTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGGAATCCAGCTCTTCTATAAGAACAAGTGCTCTTACCGCCTGAG  200

seq1  CCATCTCTTCACACCCTGCTTCTGCCTCATACTCTGTGCCCTTGGGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCTTCACACCCTGCTTCTGCCTCATACTCTGTGCCCTTGGGAAAA  250

seq1  ATCTCTAAGTTTTTCTGGGATTCAATTTCCTCATCTACAAGGCAGTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTAAGTTTTTCTGGGATTCAATTTCCTCATCTACAAGGCAGTGTCA  300

seq1  TGTTTCAAAAGTTCTTCTCAGCATTGATAATTTGTAATCTGAGTCATCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAAAAGTTCTTCTCAGCATTGATAATTTGTAATCTGAGTCATCTT  350

seq1  TCTTACTTTAGTTTGTGACCTGTTACTTCAGCCAGGTTGTTATACCAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTTTAGTTTGTGACCTGTTACTTCAGCCAGGTTGTTATACCAGAT  400

seq1  GAGAGGAGGAGGCGGCATGCAGCACAGTGTAGATACCGGTCCTCTAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGGAGGCGGCATGCAGCACAGTGTAGATACCGGTCCTCTAGCAT  450

seq1  CCATGAACTCCCCATGATGTGCACAAACCTCTCCTGACAATAACATCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAACTCCCCATGATGTGCACAAACCTCTCCTGACAATAACATCCAA  500

seq1  TATTCTCATGTCCTAGCATTTGTTCAATTAAAGCTTTTGCACATTTGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCATGTCCTAGCATTTGTTCAATTAAAGCTTTTGCACATTTGTGA  550

seq1  CCCTTCTTCTTTATCAATAACATCAAGGAAGCTGGGTTCCAGGGCCAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTTCTTTATCAATAACATCAAGGAAGCTGGGTTCCAGGGCCAAGT  600

seq1  TGGTGATGACTTTAAGATTTTAATTCTCATAAGAAATCTTCAAGGAGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATGACTTTAAGATTTTAATTCTCATAAGAAATCTTCAAGGAGTTA  650

seq1  CTTCTGCAACTCTAGATCCACTCCAGTGCCAGAAGTTCAGAATAACACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCAACTCTAGATCCACTCCAGTGCCAGAAGTTCAGAATAACACTG  700

seq1  GCTAAAACAGCTCTGAGAAAGCACAAGGTAAACAAGGGTGTGGTACCTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAACAGCTCTGAGAAAGCACAAGGTAAACAAGGGTGTGGTACCTAC  750

seq1  TGAAAACAAGGGTACATGAAAACTCATAAATATCTGCCAAGTACCACTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAAGGGTACATGAAAACTCATAAATATCTGCCAAGTACCACTCA  800

seq1  TTATGAAATGGAGCATTCTGAGAAAAAAAATAAATGAATTC  841
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAATGGAGCATTCTGAGAAAAAAAATAAATGAATTC  841