BAC Information

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BAC

Clone NameB6Ng01-166B08
Chromosome7 (Build37)
Map Location 97,210,166 - 97,333,265
singlet/doubletdoublet
Overlap geneEG384719, 2310010J17Rik, Picalm
Upstream geneTmem135, LOC100039969, Fzd4, Prss23, LOC100040001, Me3, Ccdc81, l7Rn6, Eed, E230029C05Rik
Downstream geneCcdc83, Sytl2, Ccdc89, Crebzf, Tmem126a, Tmem126b, B230218P12Rik, LOC666689, LOC621816, LOC100039943, Dlg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166B08.bB6Ng01-166B08.g
ACCDH957959DH957960
length1,2341,006
definitionDH957959|Mus musculus domesticus DNA, BAC clone: B6Ng01-166B08, 5' end.DH957960|Mus musculus domesticus DNA, BAC clone: B6Ng01-166B08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,210,166 - 97,211,416)(97,332,254 - 97,333,265)
sequence
gaattcttccctcttcatgccaccgagtcttctgccatccccttcttgtc
ccttccatcccatttctgcctctccttgacacatagggtcctgatgaggg
gaaagggtgctttgtaaaagaggactcgaagtggaaaatttgaagaaaaa
ataaaataaagccaacttaaaagatcttctgcagctccgatgtcgtgttg
ttaatgttgaaatataaacatctgctctgtttatattggctggcttctga
aatgatcatcgttggttatatttaggaatgcaacggcttggaaagcatgc
gaaaaaactccgagaacaaaaatatttttcctcttaactttctggaaaat
ctggttggccccccctgccccccaattccccaaacacatcttttccttac
attctctctctgtctctctaactctgcctctctctgtctgtctctgtctc
tctgcctgtctctgtctccctttctgatccatcgtgacacctttctttca
gttacctctctctatctttcattttgtttacattttttttttttaacagc
agggttttaaacctgatggttttgttacagaaagtttaggagttagcaaa
gtgaatgaaagcataatgtgggtcggaggtcagaaaggaagcaaagaaca
gtcatctttccaccaacaataaaaataactgtaagcatcatataaaatca
tctcctaccttttattaatgtttttacattgacgggatgattaagaacat
ggtgactagcatcgatttccttttgaatgaaattgcaaattattaacttc
tttccatcagcgaccacacctcaacagcacgatagtccatagatggacat
ttaaattcttaagacctttcacagtaaaaaaaacaatgctataatccttg
atagctctttcgtcttaaagagttattgaattaaaccaatcacatgagtg
catcattacacttgtggaaagggaagatgttggcagtcctttgggaccac
cactggctgccctgcttttctctctcttctgcccctctctcttctactca
gccaggggatcacttgacaggcatgcatgttcggtcaagtatccgcatag
atgctaggaggattgcaggagggggaatggttactaccctgggtggaatc
aaggaccaccctggcagacctgtgcggcctgggggacttagtaggactgg
aggagattcacttcctgtgccgagagaccatccc
gaattcaaacaaaaatttgcaggagtccaaacattttcctatcaaatgtc
ctcattaattcccttttaagatgtcatttgtgctgtatatatacatttat
tgctttgtttttttctttgagacacgttcttgctgtatagaccaccctgg
ccgcaatagtagagatccacctctctgcttcccaagtgctgggattaaag
gcatacaccaaccattcccagactatgcatgtatgtatatgtatatatat
atttaatgacaatttaagggaatcaagtactgtgcataaatatacaaaat
tatctgggcttatttttaattgtagtacactggcaaaaaaacaaaacaaa
caaacaaacaaaaaaaaaactggaagagctgcaaagatgaatcaatggtt
aagagtatttgcagctcttccagaggatcagaattcaattcccagcatcc
aaatcaagtggatcactattgcctccaggataactaatcctcttttacgg
ctatcaagagcaatcacctacacatgctacatatactcacacacagaaat
acacatacacacaaatgaataaataagaaacccccaccatagttgaaaag
aaatcaatgaatacatagagctttaaattctacaagccagtaatattaaa
ggtaaaatatactcatgaaaatatctaagtacagattaaaaggtataata
aggtatctacttataaaatcataatgtactaaaagaaaaataaggaaaat
aagaatagaaagggaggggatgcaattttaaaaaatcaagtaaggactga
gatatagctcagtggtataatctgcagagagtgcccaagttcttaggtta
aatcttcagtaccagagtagtcaggggagatgaaaggagggtgaagagat
agggagcaggcctatttattcttacaaggttatgaaaataagtcagctgt
ggaagatacattttaaactcagtacctaggaggtgagagtaggcagatct
caatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_97210166_97211416
seq2: B6Ng01-166B08.b_46_1279

seq1  GAATTCTTCCCTCTTCATGCCACCGAGTCTTCTGCCATCCCCTTCTTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCCTCTTCATGCCACCGAGTCTTCTGCCATCCCCTTCTTGTC  50

seq1  CCTTCCATCCCATTTCTGCCTCTCCTTGACACATAGGGTCCTGATGAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCATCCCATTTCTGCCTCTCCTTGACACATAGGGTCCTGATGAGGG  100

seq1  GAAAGGGTGCTTTGTAAAAGAGGACTCGAAGTGGAAAATTTGAAGAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGTGCTTTGTAAAAGAGGACTCGAAGTGGAAAATTTGAAGAAAAA  150

seq1  ATAAAATAAAGCCAACTTAAAAGATCTTCTGCAGCTCCGATGTCGTGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAAGCCAACTTAAAAGATCTTCTGCAGCTCCGATGTCGTGTTG  200

seq1  TTAATGTTGAAATATAAACATCTGCTCTGTTTATATTGGCTGGCTTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTTGAAATATAAACATCTGCTCTGTTTATATTGGCTGGCTTCTGA  250

seq1  AATGATCATCGTTGGTTATATTTAGGAATGCAACGGCTTGGAAAGCATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCATCGTTGGTTATATTTAGGAATGCAACGGCTTGGAAAGCATGC  300

seq1  GAAAAAACTCCGAGAACAAAAATATTTTTCCTCTTAACTTTCTGGAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAACTCCGAGAACAAAAATATTTTTCCTCTTAACTTTCTGGAAAAT  350

seq1  CTGGTTGGCCCCCCCTGCCCCCCAATTCCCCAAACACATCTTTTCCTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTGGCCCCCCCTGCCCCCCAATTCCCCAAACACATCTTTTCCTTAC  400

seq1  ATTCTCTCTCTGTCTCTCTAACTCTGCCTCTCTCTGTCTGTCTCTGTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTCTCTGTCTCTCTAACTCTGCCTCTCTCTGTCTGTCTCTGTCTC  450

seq1  TCTGCCTGTCTCTGTCTCCCTTTCTGATCCATCGTGACACCTTTCTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTGTCTCTGTCTCCCTTTCTGATCCATCGTGACACCTTTCTTTCA  500

seq1  GTTACCTCTCTCTATCTTTCATTTTGTTTACATTTTTTTTTTTTAACAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCTCTCTCTATCTTTCATTTTGTTTACATTTTTTTTTTTTAACAGC  550

seq1  AGGGTTTTAAACCTGATGGTTTTGTTACAGAAAGTTTAGGAGTTAGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTTAAACCTGATGGTTTTGTTACAGAAAGTTTAGGAGTTAGCAAA  600

seq1  GTGAATGAAAGCATAATGTGGGTCGGAGGTCAGAAAGGAAGCAAAGAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGAAAGCATAATGTGGGTCGGAGGTCAGAAAGGAAGCAAAGAACA  650

seq1  GTCATCTTTCCACCAACAATAAAAATAACTGTAAGCATCATATAAAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTTTCCACCAACAATAAAAATAACTGTAAGCATCATATAAAATCA  700

seq1  TCTCCTACCTTTTATTAATGTTTTTACATTGACGGGATGATTAAGAACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTACCTTTTATTAATGTTTTTACATTGACGGGATGATTAAGAACAT  750

seq1  GGTGACTAGCATCGATTTCCTTTTGAATGAAATTGCAAATTATTAACTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTAGCATCGATTTCCTTTTGAATGAAATTGCAAATTATTAACTTC  800

seq1  TTTCCATCAGCGACCACACCTCAACAGCACGATAGTCCATAGATGGACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATCAGCGACCACACCTCAACAGCACGATAGTCCATAGATGGACAT  850

seq1  TTAAATTCTTAAGACCTTTCACAGTAAAAAAAACAATGCTATAATCCTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTCTTAAGACCTTTCACAGTAAAAAAAACAATGCTATAATCCTTG  900

seq1  ATAGCTCTTTCGTCTTAAAGAGTTATTGAATTAAACCAATCACATGAGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCTTTCGTCTTAAAGAGTTATTGAATTAAACCAATCACATGAGTG  950

seq1  CATCATTACACTTGTGGAAAGGGAAGATGTTGGCAAGTCCTTTGGGACCA  1000
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CATCATTACACTTGTGGAAAGGGAAGATGTTGGC-AGTCCTTTGGGACCA  999

seq1  CCACTGGCTGCCCTGCTTTTCCTCTCTCTTCCTGCCCCTCTCTCTTCTAC  1050
      |||||||||||||||||||| ||||||||| |||||||||||||||||| 
seq2  CCACTGGCTGCCCTGCTTTT-CTCTCTCTT-CTGCCCCTCTCTCTTCTA-  1046

seq1  CTCAGCCCAGGGGATCAACTTTGACAGGCATGCATG-TCGTTCAAAGTA-  1098
      ||||| |||||||||||   |||||||||||||||| ||| || ||||| 
seq2  CTCAG-CCAGGGGATCA--CTTGACAGGCATGCATGTTCGGTC-AAGTAT  1092

seq1  CCGCATTAGATGCTAGGAGGATTGCAGGAGGGGAGATGGTCACTACCCTG  1148
      ||||| |||||||||||||||||||||||||||  ||||| |||||||||
seq2  CCGCA-TAGATGCTAGGAGGATTGCAGGAGGGGGAATGGTTACTACCCTG  1141

seq1  GGTTGATACAAGGACCACCCGTGGGCCAGGCACTGTGCTGCCTGGTGCAG  1198
      ||| ||  |||||||||||| |||  ||| | |||||| |||||| | | 
seq2  GGTGGAATCAAGGACCACCC-TGG--CAGAC-CTGTGCGGCCTGGGGGA-  1186

seq1  CTTAAGGTTAAGGAAATGGAAGGAAGTCTCAGCTCC--TGCCGAGAGACC  1246
      ||||  ||  ||| | ||||  | ||  |||  |||  ||||||||||||
seq2  CTTA--GT--AGG-ACTGGA--GGAGATTCACTTCCTGTGCCGAGAGACC  1229

seq1  ATCCC  1251
      |||||
seq2  ATCCC  1234

seq1: chr7_97332254_97333265
seq2: B6Ng01-166B08.g_67_1072 (reverse)

seq1  TCATGGAGATCTGCCTGCCTCT-ACCTCCTAAGTACTGAGTTTAAAAATG  49
      |||| |||||||||||  |||| |||||||| ||||||||||| ||||||
seq2  TCATTGAGATCTGCCT-ACTCTCACCTCCTAGGTACTGAGTTT-AAAATG  48

seq1  TATTCTTCCACAGCTGACTTAATTTTCATAAACTTGTTAAGAATAAATAG  99
      || ||||||||||||||||| |||||||||| |||| |||||||||||||
seq2  TA-TCTTCCACAGCTGACTT-ATTTTCATAACCTTG-TAAGAATAAATAG  95

seq1  GCCTGCTCCCCTATCTCTTCACCCTCCCTTCATCTCCCCTGACCTACTCT  149
      ||||||| ||||||||||||||||||| |||||||||||||| |||||||
seq2  GCCTGCT-CCCTATCTCTTCACCCTCCTTTCATCTCCCCTGA-CTACTCT  143

seq1  GGTACTGAAGATTTAACCTAAGAACTTGGGCACTCTCTGCAGATTATACC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTGAAGATTTAACCTAAGAACTTGGGCACTCTCTGCAGATTATACC  193

seq1  ACTGAGCTATATCTCAGTCCTTACTTGATTTTTTAAAATTGCATCCCCTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCTATATCTCAGTCCTTACTTGATTTTTTAAAATTGCATCCCCTC  243

seq1  CCTTTCTATTCTTATTTTCCTTATTTTTCTTTTAGTACATTATGATTTTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTATTCTTATTTTCCTTATTTTTCTTTTAGTACATTATGATTTTA  293

seq1  TAAGTAGATACCTTATTATACCTTTTAATCTGTACTTAGATATTTTCATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGATACCTTATTATACCTTTTAATCTGTACTTAGATATTTTCATG  343

seq1  AGTATATTTTACCTTTAATATTACTGGCTTGTAGAATTTAAAGCTCTATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATTTTACCTTTAATATTACTGGCTTGTAGAATTTAAAGCTCTATG  393

seq1  TATTCATTGATTTCTTTTCAACTATGGTGGGGGTTTCTTATTTATTCATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATTGATTTCTTTTCAACTATGGTGGGGGTTTCTTATTTATTCATT  443

seq1  TGTGTGTATGTGTATTTCTGTGTGTGAGTATATGTAGCATGTGTAGGTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTATGTGTATTTCTGTGTGTGAGTATATGTAGCATGTGTAGGTGA  493

seq1  TTGCTCTTGATAGCCGTAAAAGAGGATTAGTTATCCTGGAGGCAATAGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTTGATAGCCGTAAAAGAGGATTAGTTATCCTGGAGGCAATAGTG  543

seq1  ATCCACTTGATTTGGATGCTGGGAATTGAATTCTGATCCTCTGGAAGAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTTGATTTGGATGCTGGGAATTGAATTCTGATCCTCTGGAAGAGC  593

seq1  TGCAAATACTCTTAACCATTGATTCATCTTTGCAGCTCTTCCAGTTTTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATACTCTTAACCATTGATTCATCTTTGCAGCTCTTCCAGTTTTTT  643

seq1  TTTTGTTTGTTTGTTTGTTTTGTTTTTTTGCCAGTGTACTACAATTAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGTTTGTTTGTTTTGTTTTTTTGCCAGTGTACTACAATTAAAA  693

seq1  ATAAGCCCAGATAATTTTGTATATTTATGCACAGTACTTGATTCCCTTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCCAGATAATTTTGTATATTTATGCACAGTACTTGATTCCCTTAA  743

seq1  ATTGTCATTAAATATATATATACATATACATACATGCATAGTCTGGGAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCATTAAATATATATATACATATACATACATGCATAGTCTGGGAAT  793

seq1  GGTTGGTGTATGCCTTTAATCCCAGCACTTGGGAAGCAGAGAGGTGGATC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTGTATGCCTTTAATCCCAGCACTTGGGAAGCAGAGAGGTGGATC  843

seq1  TCTACTATTGCGGCCAGGGTGGTCTATACAGCAAGAACGTGTCTCAAAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTATTGCGGCCAGGGTGGTCTATACAGCAAGAACGTGTCTCAAAGA  893

seq1  AAAAAACAAAGCAATAAATGTATATATACAGCACAAATGACATCTTAAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAAGCAATAAATGTATATATACAGCACAAATGACATCTTAAAA  943

seq1  GGGAATTAATGAGGACATTTGATAGGAAAATGTTTGGACTCCTGCAAATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATTAATGAGGACATTTGATAGGAAAATGTTTGGACTCCTGCAAATT  993

seq1  TTTGTTTGAATTC  1012
      |||||||||||||
seq2  TTTGTTTGAATTC  1006