BAC Information

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BAC

Clone NameB6Ng01-166D12
Chromosome7 (Build37)
Map Location 126,183,840 - 126,306,028
singlet/doubletdoublet
Overlap geneGpr139
Upstream geneRps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5, Mir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b
Downstream geneLOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3, Tmem159, Zp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166D12.bB6Ng01-166D12.g
ACCDH958058DH958059
length583740
definitionDH958058|Mus musculus domesticus DNA, BAC clone: B6Ng01-166D12, 5' end.DH958059|Mus musculus domesticus DNA, BAC clone: B6Ng01-166D12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,183,840 - 126,184,428)(126,305,290 - 126,306,028)
sequence
aacctcaggtccccatgagccaaccccccagcctcctccaggcttcacct
ttccttctctctttgcttcctactgcagtgcctgggtgcagagacacaag
agagtcagctgcagggtcttctagtctcgatgaggggtgcagtgagatgg
cagatttggctcctcgcagattccaggggttcactcttccttggcaaggc
catccagagcacagctcccacagtgtctgcagtactcagcagcctctggc
tcacgggcaatccccacagagagcttgtttggagactgcaatgggacttg
agggatcaagagttgagtttatagaaatacgtgtaggtttgggtcccaag
ggacagtgtgccttactgttttagggtaggctgaacccctttcccatgtt
gtatcagtcatttgcatctgctacatgttgtgtttaaaaaaaggaaacta
ggagagaaacggactgggaaaatgagttgaaggaggtgagggaggtggtt
tagggagaagtgaagctaaggaggagtcaagatggaggtgtgcagcatgc
ttgtttccttccgtatgggaggaggtcttgaac
gaattctcctgcagtcttgcttgattcctatgctccataggctcagtcat
tcttggatgactagcaggcctaccacatgtcagctcctctctgtcctttc
ccctcttgtttcagtgcactccagagcaccaagtccttccttaccgttga
agcagtgtctgggattccttctctacctctaatcttttgcctgtcaggct
ttatttctaaatgtttctcagagctctacatgagccagactgcaggtact
tacttatactcgagtgaatatggggtgtgtgtgggtgtgtgcgcatgcgt
gctcgagcactgcttctaaatctttctcaacacactgaaagatatgacca
cagttggctgatatctcaagtgaaaccacacagcaactgcactcttgaaa
gggggtaggggttgtgctgtgccctgggagttccatgccctccccatgca
agcacaccaacctggtgctctctaaaagctctcgcacagagctactgaag
ggatcaggaattttgaaacaagcctttctgtttccttgggctgtttccat
ttatgtgttctgagtacactgaactttggaccccacactctgagaacctg
actcaaagttgggtatgctgttggacatcccaagtttatgttgagttaaa
ctgggtgcattggattagaagagtatggcctcaaaacacaataccaaatt
aacttttcaagcatcattggcacatttgattgtgtcatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_126183840_126184428
seq2: B6Ng01-166D12.b_46_634

seq1  GAATTCAACCTCAGGTCCCCATGAGCCAACCCCCCAGCCTCCTCCAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCTCAGGTCCCCATGAGCCAACCCCCCAGCCTCCTCCAGGCT  50

seq1  TCACCTTTCCTTCTCTCTTTGCTTCCTACTGCAGTGCCTGGGTGCAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTTCCTTCTCTCTTTGCTTCCTACTGCAGTGCCTGGGTGCAGAGA  100

seq1  CACAAGAGAGTCAGCTGCAGGGTCTTCTAGTCTCGATGAGGGGTGCAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGAGAGTCAGCTGCAGGGTCTTCTAGTCTCGATGAGGGGTGCAGTG  150

seq1  AGATGGCAGATTTGGCTCCTCGCAGATTCCAGGGGTTCACTCTTCCTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCAGATTTGGCTCCTCGCAGATTCCAGGGGTTCACTCTTCCTTGG  200

seq1  CAAGGCCATCCAGAGCACAGCTCCCACAGTGTCTGCAGTACTCAGCAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCATCCAGAGCACAGCTCCCACAGTGTCTGCAGTACTCAGCAGCC  250

seq1  TCTGGCTCACGGGCAATCCCCACAGAGAGCTTGTTTGGAGACTGCAATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTCACGGGCAATCCCCACAGAGAGCTTGTTTGGAGACTGCAATGG  300

seq1  GACTTGAGGGATCAAGAGTTGAGTTTATAGAAATACGTGTAGGTTTGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAGGGATCAAGAGTTGAGTTTATAGAAATACGTGTAGGTTTGGGT  350

seq1  CCCAAGGGACAGTGTGCCTTACTGTTTTAGGGTAGGCTGAACCCCTTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGGACAGTGTGCCTTACTGTTTTAGGGTAGGCTGAACCCCTTTCC  400

seq1  CATGTTGTATCAGTCATTTGCATCTGCTACATGTTGTGTTTAAAAAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGTATCAGTCATTTGCATCTGCTACATGTTGTGTTTAAAAAAAGG  450

seq1  AAACTAGGAGAGAAACGGACTGGGAAAATGAGTTGAAGGAGGTGAGGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGGAGAGAAACGGACTGGGAAAATGAGTTGAAGGAGGTGAGGGAG  500

seq1  GTGGTTTAGGGAGAAGTGAAGCTAAGGAGGAGTCAAGATGGAGGTGTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTAGGGAGAAGTGAAGCTAAGGAGGAGTCAAGATGGAGGTGTGCA  550

seq1  GCAAGCTTGTTTCCTTCCGTATGGGAGGAGGTCTTGAAC  589
      ||| |||||||||||||||||||||||||||||||||||
seq2  GCATGCTTGTTTCCTTCCGTATGGGAGGAGGTCTTGAAC  589

seq1: chr7_126305290_126306028
seq2: B6Ng01-166D12.g_70_809 (reverse)

seq1  GGATGACACAATCAAATGTGCCAATGATTGCTTG-GAAGTTAATTTGGTA  49
      ||||||||||||||||||||||||||| ||||||  ||||||||||||||
seq2  GGATGACACAATCAAATGTGCCAATGA-TGCTTGAAAAGTTAATTTGGTA  49

seq1  TTGTGTTTTGAGGCCATACTCTTCTAATCCAATGCACCCAGTTTAACTCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTTGAGGCCATACTCTTCTAATCCAATGCACCCAGTTTAACTCA  99

seq1  ACATAAACTTGGGATGTCCAACAGCATACCCAACTTTGAGTCAGGTTCTC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAACTTGGGATGTCCAACAGCATACCCAACTTTGAGTCAGGTTCTC  149

seq1  AGAGTGTGGGGTCC-AAGTTCAGTGTACTCAGAACACATAAATGGAAACA  198
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGAGTGTGGGGTCCAAAGTTCAGTGTACTCAGAACACATAAATGGAAACA  199

seq1  GCCCAAGGAAACAGAAAGGCTTGTTTCAAAATTCCTGATCCCTTCAGTAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAGGAAACAGAAAGGCTTGTTTCAAAATTCCTGATCCCTTCAGTAG  249

seq1  CTCTGTGCGAGAGCTTTTAGAGAGCACCAGGTTGGTGTGCTTGCATGGGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGCGAGAGCTTTTAGAGAGCACCAGGTTGGTGTGCTTGCATGGGG  299

seq1  AGGGCATGGAACTCCCAGGGCACAGCACAACCCCTACCCCCTTTCAAGAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATGGAACTCCCAGGGCACAGCACAACCCCTACCCCCTTTCAAGAG  349

seq1  TGCAGTTGCTGTGTGGTTTCACTTGAGATATCAGCCAACTGTGGTCATAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTGCTGTGTGGTTTCACTTGAGATATCAGCCAACTGTGGTCATAT  399

seq1  CTTTCAGTGTGTTGAGAAAGATTTAGAAGCAGTGCTCGAGCACGCATGCG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGTGTGTTGAGAAAGATTTAGAAGCAGTGCTCGAGCACGCATGCG  449

seq1  CACACACCCACACACACCCCATATTCACTCGAGTATAAGTAAGTACCTGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACCCACACACACCCCATATTCACTCGAGTATAAGTAAGTACCTGC  499

seq1  AGTCTGGCTCATGTAGAGCTCTGAGAAACATTTAGAAATAAAGCCTGACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGCTCATGTAGAGCTCTGAGAAACATTTAGAAATAAAGCCTGACA  549

seq1  GGCAAAAGATTAGAGGTAGAGAAGGAATCCCAGACACTGCTTCAACGGTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGATTAGAGGTAGAGAAGGAATCCCAGACACTGCTTCAACGGTA  599

seq1  AGGAAGGACTTGGTGCTCTGGAGTGCACTGAAACAAGAGGGGAAAGGACA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGACTTGGTGCTCTGGAGTGCACTGAAACAAGAGGGGAAAGGACA  649

seq1  GAGAGGAGCTGACATGTGGTAGGCCTGCTAGTCATCCAAGAATGACTGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGCTGACATGTGGTAGGCCTGCTAGTCATCCAAGAATGACTGAG  699

seq1  CCTATGGAGCATAGGAATCAAGCAAGACTGCAGGAGAATTC  739
      |||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGGAGCATAGGAATCAAGCAAGACTGCAGGAGAATTC  740