BAC Information

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BAC

Clone NameB6Ng01-166F12
Chromosome7 (Build37)
Map Location 117,189,439 - 117,296,923
singlet/doubletdoublet
Overlap geneIpo7, AA474408, Zfp143, Wee1
Upstream geneRic3, Lmo1, Stk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1, Tmem41b
Downstream geneSwap70, EG668368, Sbf2, LOC668246, Adm, B430319F04Rik, Ampd3, Rnf141, Xlkd1, Mrvi1, Ctr9, Eif4g2, LOC100043221, LOC100042658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166F12.bB6Ng01-166F12.g
ACCDH958151DH958152
length1,152770
definitionDH958151|Mus musculus domesticus DNA, BAC clone: B6Ng01-166F12, 5' end.DH958152|Mus musculus domesticus DNA, BAC clone: B6Ng01-166F12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,189,439 - 117,190,608)(117,296,175 - 117,296,923)
sequence
gaattctaaaatgtataattgctggaactatgaggaggatcagaggtgtg
attcatccttgcgaagcaggcagtaaaaccatcagttccatgccagtctc
agatcaaaatgcatgtgttggataacatgagatttaagggatgagtttca
ttttgtgtcacgattagtcccttctaacattgtcatgtgtattttaatat
tatgtttgaaaatgcatcaacttttttatattcacagaaaaagatctaca
aagatcaaatggaatacatgttgcaaaatcatgtatttcctctcttcagc
agtgagctaggttacatgagagcaagggtaagttaaagtattgaaatatt
tttatgtcttgtaagaaatgactgaaagttaaaacttggcttaaacatat
taagacttttttctgtaagtctttgtctggctgctatactgagtcctgtg
tgcatagttttcatctatgtctggtagcagtatctgtctgcgttttgcat
tcagatcttgctatccacacaaacgaatgcagccaaagaataagttggga
tcatagtactggcctagtgttgtgtttttttaacacatctcccactggcc
agcctccaaattcccagacacaaaaattttgaaagagcttagttggggaa
gtctattgtaatgtcttcagatacacacacacacacacacacacacacac
acacacacgcgcgcacacatgcacacatccttacttccgtcctctttttt
aaggcttgctgggttcttcactatttttgtgaagtgaagttcaaaagtga
tcaaaatctccaaacagctttagagctgacaagaagatgtctgattgatg
atcgagaaatgcctgtgaaagtggaagctgccattgcactacaggtgttg
atcagcaatcaagaaaaaggtatgtcacagacacctttacacacaactgt
taatggaattgtagaaactagcttatagactctgtgaaacacttggtttt
gtgtttctataccacgtatagctgtttgatatgctccccctttgtataca
gctaagagtacatcacttcatttatcaaacctgtcatgcagctcttcttc
atattttagagaaacgaaaatgatgatctttacaatttatccgaaatgat
ct
gaattctctgtgggagaatgtgagccaaggtatatgcaagctcttgggtg
tgccaggatgatacaccaactatataaacactgagacagctgtgggcaga
tggccactgtcccaaccgtgactccctccggtgccagccaggatgcaagc
cttccacctctgcttgtgattgaagatgactttctgcactgagtgctgct
tcctttcgggccttatgcaccctctggtcactcaaggttgaatgaatctc
ttctagtttcagcttttaggttaaaccccaaacccaacctgccatagagt
tgtcctgcgcagtgcattcgagcaattctttagaggcacacaagaggaag
tatgctactccaggggaggagggagctaagcactttcaggtcacctctgg
gtaacaaggagtaagaaagggagacaagatggcccttccctccatcacca
gcattcagggattcggagtcagggacaaccatgggagcttgagctaaggc
tcaagcacaaaggagctgcaccaagagccaagaactgacaggaggaggat
gtaacagtgcgctgaactggtttgctgagaaggaagacagcaaggccaaa
gactgagcaagtgcaactaccccaggccctttccaaactggggatcagaa
gaggccaaaaccaaatggcagtgacactcctctcatttacctctcagagt
cactgttattctctctctctctctctctctctctctctctctctctctca
cacacacacacacacacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_117189439_117190608
seq2: B6Ng01-166F12.b_47_1198

seq1  GAATTCTAAAATGTATAATTGCTGGAACTATGAGGAGGATCAGAGGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAATGTATAATTGCTGGAACTATGAGGAGGATCAGAGGTGTG  50

seq1  ATTCATCCTTGCGAAGCAGGCAGTAAAACCATCAGTTCCATGCCAGTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCCTTGCGAAGCAGGCAGTAAAACCATCAGTTCCATGCCAGTCTC  100

seq1  AGATCAAAATGCATGTGTTGGATAACATGAGATTTAAGGGATGAGTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAAAATGCATGTGTTGGATAACATGAGATTTAAGGGATGAGTTTCA  150

seq1  TTTTGTGTCACGATTAGTCCCTTCTAACATTGTCATGTGTATTTTAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGTCACGATTAGTCCCTTCTAACATTGTCATGTGTATTTTAATAT  200

seq1  TATGTTTGAAAATGCATCAACTTTTTTATATTCACAGAAAAAGATCTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTGAAAATGCATCAACTTTTTTATATTCACAGAAAAAGATCTACA  250

seq1  AAGATCAAATGGAATACATGTTGCAAAATCATGTATTTCCTCTCTTCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCAAATGGAATACATGTTGCAAAATCATGTATTTCCTCTCTTCAGC  300

seq1  AGTGAGCTAGGTTACATGAGAGCAAGGGTAAGTTAAAGTATTGAAATATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGCTAGGTTACATGAGAGCAAGGGTAAGTTAAAGTATTGAAATATT  350

seq1  TTTATGTCTTGTAAGAAATGACTGAAAGTTAAAACTTGGCTTAAACATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTCTTGTAAGAAATGACTGAAAGTTAAAACTTGGCTTAAACATAT  400

seq1  TAAGACTTTTTTCTGTAAGTCTTTGTCTGGCTGCTATACTGAGTCCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTTTTTTCTGTAAGTCTTTGTCTGGCTGCTATACTGAGTCCTGTG  450

seq1  TGCATAGTTTTCATCTATGTCTGGTAGCAGTATCTGTCTGCGTTTTGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGTTTTCATCTATGTCTGGTAGCAGTATCTGTCTGCGTTTTGCAT  500

seq1  TCAGATCTTGCTATCCACACAAACGAATGCAGCCAAAGAATAAGTTGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATCTTGCTATCCACACAAACGAATGCAGCCAAAGAATAAGTTGGGA  550

seq1  TCATAGTACTGGCCTAGTGTTGTGTTTTTTTAACACATCTCCCACTGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTACTGGCCTAGTGTTGTGTTTTTTTAACACATCTCCCACTGGCC  600

seq1  AGCCTCCAAATTCCCAGACACAAAAATTTTGAAAGAGCTTAGTTGGGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCAAATTCCCAGACACAAAAATTTTGAAAGAGCTTAGTTGGGGAA  650

seq1  GTCTATTGTAATGTCTTCAGATACACACACACACACACACACACACACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTGTAATGTCTTCAGATACACACACACACACACACACACACACAC  700

seq1  ACACACACGCGCGCACACATGCACACATCCTTACTTCCGTCCTCTTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACGCGCGCACACATGCACACATCCTTACTTCCGTCCTCTTTTTT  750

seq1  AAGGCTTGCTGGGTTCTTCACTATTTTTGTGAAGTGAAGTTCAAAAGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTGCTGGGTTCTTCACTATTTTTGTGAAGTGAAGTTCAAAAGTGA  800

seq1  TCAAAATCTCCAAACAGCTTTAGAGCTGACAAGAAGATGTCTGATTGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATCTCCAAACAGCTTTAGAGCTGACAAGAAGATGTCTGATTGATG  850

seq1  ATCGAGAAATGCCTGTGAAAGTGGAAGCTGCCATTGCACTACAGGTGTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAGAAATGCCTGTGAAAGTGGAAGCTGCCATTGCACTACAGGTGTTG  900

seq1  ATCAGCAATCAAGAAAAAGGTATGTCACAGACACCTTTACACACAACTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCAATCAAGAAAAAGGTATGTCACAGACACCTTTACACACAACTGT  950

seq1  TAAATGGAATTGTAGAAACTAGCTTAATAGACTCTGTGAAAACACCTTGG  1000
      | ||||||||||||||||||||||| |||||||||||| ||||| |||||
seq2  T-AATGGAATTGTAGAAACTAGCTT-ATAGACTCTGTG-AAACA-CTTGG  996

seq1  TTTTTGTTGTTTCTATACCCAACGTAATAGCTGTTTGATAATGCTCCCCC  1050
      ||||   ||||||||||||  |||| ||||||||||||| ||||||||||
seq2  TTTT--GTGTTTCTATACC--ACGT-ATAGCTGTTTGAT-ATGCTCCCCC  1040

seq1  TTTGTATTACAGCTAAAGAGTACATCACTCCATTTATCAGACCTGTCATG  1100
      |||||| ||||||| |||||||||||||| ||||||||| ||||||||||
seq2  TTTGTA-TACAGCT-AAGAGTACATCACTTCATTTATCAAACCTGTCATG  1088

seq1  CAGGCTCTTCTTCATATTATAAGAGAAACAGAAAATGATGATCTTACAAA  1150
      || ||||||||||||||| | |||||||| |||||||||||||||   ||
seq2  CA-GCTCTTCTTCATATT-TTAGAGAAAC-GAAAATGATGATCTTTACAA  1135

seq1  TGTAATTCAGAAAATGATCT  1170
      | ||  || | |||||||||
seq2  TTTA--TCCG-AAATGATCT  1152

seq1: chr7_117296175_117296923
seq2: B6Ng01-166F12.g_67_815 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATAACAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATAACAGTGA  50

seq1  CTCTGAGAGGTAAATGAGAGGAGTGTCACTGCCATTTGGTTTTGGCCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGAGGTAAATGAGAGGAGTGTCACTGCCATTTGGTTTTGGCCTCT  100

seq1  TCTGATCCCCAGTTTGGAAAGGGCCTGGGGTAGTTGCACTTGCTCAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCCCCAGTTTGGAAAGGGCCTGGGGTAGTTGCACTTGCTCAGTCT  150

seq1  TTGGCCTTGCTGTCTTCCTTCTCAGCAAACCAGTTCAGCGCACTGTTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCTTGCTGTCTTCCTTCTCAGCAAACCAGTTCAGCGCACTGTTACA  200

seq1  TCCTCCTCCTGTCAGTTCTTGGCTCTTGGTGCAGCTCCTTTGTGCTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTGTCAGTTCTTGGCTCTTGGTGCAGCTCCTTTGTGCTTGAG  250

seq1  CCTTAGCTCAAGCTCCCATGGTTGTCCCTGACTCCGAATCCCTGAATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGCTCAAGCTCCCATGGTTGTCCCTGACTCCGAATCCCTGAATGCT  300

seq1  GGTGATGGAGGGAAGGGCCATCTTGTCTCCCTTTCTTACTCCTTGTTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATGGAGGGAAGGGCCATCTTGTCTCCCTTTCTTACTCCTTGTTACC  350

seq1  CAGAGGTGACCTGAAAGTGCTTAGCTCCCTCCTCCCCTGGAGTAGCATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTGACCTGAAAGTGCTTAGCTCCCTCCTCCCCTGGAGTAGCATAC  400

seq1  TTCCTCTTGTGTGCCTCTAAAGAATTGCTCGAATGCACTGCGCAGGACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTTGTGTGCCTCTAAAGAATTGCTCGAATGCACTGCGCAGGACAA  450

seq1  CTCTATGGCAGGTTGGGTTTGGGGTTTAACCTAAAAGCTGAAACTAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGGCAGGTTGGGTTTGGGGTTTAACCTAAAAGCTGAAACTAGAAG  500

seq1  AGATTCATTCAACCTTGAGTGACCAGAGGGTGCATAAGGCCCGAAAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCATTCAACCTTGAGTGACCAGAGGGTGCATAAGGCCCGAAAGGAA  550

seq1  GCAGCACTCAGTGCAGAAAGTCATCTTCAATCACAAGCAGAGGTGGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCACTCAGTGCAGAAAGTCATCTTCAATCACAAGCAGAGGTGGAAGG  600

seq1  CTTGCATCCTGGCTGGCACCGGAGGGAGTCACGGTTGGGACAGTGGCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATCCTGGCTGGCACCGGAGGGAGTCACGGTTGGGACAGTGGCCAT  650

seq1  CTGCCCACAGCTGTCTCAGTGTTTATATAGTTGGTGTATCATCCTGGCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCACAGCTGTCTCAGTGTTTATATAGTTGGTGTATCATCCTGGCAC  700

seq1  ACCCAAGAGCTTGCATATACCTTGGCTCACATTCTCCCACAGAGAATTC  749
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGAGCTTGCATATACCTTGGCTCACATTCTCCCACAGAGAATTC  749