BAC Information

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BAC

Clone NameB6Ng01-166F15
Chromosome7 (Build37)4 (Build37)
Map Location 134,705,851 - 134,706,99440,336,851 - 40,337,026
singlet/doubletsingletsinglet
Overlap geneD030022P06Rik
Upstream geneEif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597
Downstream genePhkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166F15.bB6Ng01-166F15.g
ACCDH958157DH958158
length1,123796
definitionDH958157|Mus musculus domesticus DNA, BAC clone: B6Ng01-166F15, 5' end.DH958158|Mus musculus domesticus DNA, BAC clone: B6Ng01-166F15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(134,705,851 - 134,706,994)(40,336,851 - 40,337,026)
sequence
gaattctactaattatccatttttacaactttcgttttcgtaagacacga
gtccttagaaagtattcttactctgtcactaagctcagagctaagcatca
aaagatatgtagtaaccgtaactgtagacagatcagatacagtcatttca
ttataccctcccagtcccataggaattttattcctcaccttgatggcaaa
cacaagagccatgatccccaggcaagaacagccacagataatgctagtag
ccgccaaatattggaggcggagccagcggcagtggataggggatggagaa
tgagcagcttccatgttgctcaccaagctctccgctgccttctccttgtc
ctccatcacctgtggatgatatagtcaaggcacttttaagcccaacaaat
gagctcttgctcgggcatggtgactccacccttctcaaagcatgctgtct
agtgtcctaaccctacactcaggaatgctgtcttactgggaaattcctcc
agtgactcaggtgagaagactaactacgtggtcgggatcctttccatagc
tgaagattctgaatcttttgaagggcaagcatgtgtgaatgtacttattc
ttcaataaatatagacaatgaagctgacctggctaccagaaacaggagat
agaatttttttttttttaaatcttttcgagccctggctatcctggaactc
actctgtagaccaggctgggcttgaactcagaaatctgtttctgcctcac
aactggtgggattaaaggcgtgcgccaccatgcccggctgagagatatca
tcttaaaaccttattactaggtaactttttttggctttgtttgacacagg
atttcgttatgtagcccctccctggcttgccaggaactcagtatatagac
agctgtcctcaaattcagagactgcctggctctggctttgcttggcttac
ttatgatagttctctgtgtagcctggctgtcctaaactcactctgtagac
agctgcctagatcactgagatctttctgccctgctctgaatgctgggatt
aagcgtgtaaccacaaccctggcatgaataggttgagataaaagaaaggc
aagatcaatggttaggttctttt
gaattcctaagaagcaggctctaatgccaatgaaggaatagatttgctag
taaggctggaacaaacaggcaaagaaagacaatttcttctgtgtccttat
ataggcttcctgcagaaggcatggcccaagctcaaaagatctggattcaa
ggtgcatttcaaatatctggattagaagtagacctttcaatttaaaatta
aacaaaaatccctcataggtatgtccctctgtaaggcccttcccccagcc
ttgagtgggctaaatcagaccttgttttgccacagtgggctagcccacct
agggtggagtcttctgacctaggtgaaatctattgtgctgtcacatctgc
agcttcctgcaagaagccacctcctgctgagcagctgagcttgctttctt
ggtgagattctggcaaagtgagggataggtccccacccccacccccttta
aattcagacttaagaattaaacattaggggctggtgagatggctcagtgg
gtaagagcacccgactgctcttccaaaggtccggagttcaaatcccagca
accacatggtggctcacaaccatctgtaatgagatctgactccctcttct
ggggtgtctgaggacagctgcagtgtacttacatataataaataaataaa
tctttaaaaaaaaaaaaaaagaaaaaaaaaaagaattaaactttaggcct
tgatcagaaacgtcttgttctcattcctctctcatctgtccttcccatct
gtgagggttgaatatccttggaccagggagtggcaccatctgaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134705851_134706994
seq2: B6Ng01-166F15.b_46_1168 (reverse)

seq1  AAAAGAACTTAACCATATGAATCTTGCCTTTCTTTTATCCTCCAAACTAT  50
      |||||||| ||||||| || |||||||||||||||||||   ||| ||||
seq2  AAAAGAACCTAACCAT-TG-ATCTTGCCTTTCTTTTATC--TCAACCTAT  46

seq1  TCATGCCCAGGGTTTGGTGG-TACACGCCTTTAATCCCAGCACTCAGGAG  99
      ||||| ||||||||  |||| |||||||  |||||||||||| ||||   
seq2  TCATG-CCAGGGTT--GTGGTTACACGC--TTAATCCCAGCATTCAG--A  89

seq1  GCAGGGGCAGATAGATCTCAGTGATTCTAGGCCAGCCTGGTCTACAGAGT  149
      ||| ||||||| |||||||||||| |||||| ||||   |||||||||||
seq2  GCA-GGGCAGAAAGATCTCAGTGA-TCTAGG-CAGC--TGTCTACAGAGT  134

seq1  GAGTTTTAGGACAGCCAAGGCTACACAGAGAAACTATCATAAGTAAGCCA  199
      ||| |||||||||||| ||||||||||||| |||||||||||||||||||
seq2  GAG-TTTAGGACAGCC-AGGCTACACAGAG-AACTATCATAAGTAAGCCA  181

seq1  AGCAAAGCCAGAGCCAGGCAGTCTCTGAATTTGAGGACAGCCTTGTCTAT  249
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  AGCAAAGCCAGAGCCAGGCAGTCTCTGAATTTGAGGACAGC--TGTCTAT  229

seq1  ATACTGAGTTCCTGGCAAGCCAGGGAGGGGCTACATAACGAAATCCTGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAGTTCCTGGCAAGCCAGGGAGGGGCTACATAACGAAATCCTGTG  279

seq1  TCAAAACAAAGCCAAAAAAAGTTACCTAGTAATAAGGTTTTAAGATGATA  349
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TC-AAACAAAGCCAAAAAAAGTTACCTAGTAATAAGGTTTTAAGATGATA  328

seq1  TCTCTCAGCCGGGCATGGTGGCGCACGCCTTTAATCCCACCAGTTGTGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAGCCGGGCATGGTGGCGCACGCCTTTAATCCCACCAGTTGTGAG  378

seq1  GCAGAAACAGATTTCTGAGTTCAAGCCCAGCCTGGTCTACAGAGTGAGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAACAGATTTCTGAGTTCAAGCCCAGCCTGGTCTACAGAGTGAGTT  428

seq1  CCAGGATAGCCAGGGCTCGAAAAGATTTAAAAAAAAAAAAATTCTATCTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATAGCCAGGGCTCGAAAAGATTTAAAAAAAAAAAAATTCTATCTC  478

seq1  CTGTTTCTGGTAGCCAGGTCAGCTTCATTGTCTATATTTATTGAAGAATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCTGGTAGCCAGGTCAGCTTCATTGTCTATATTTATTGAAGAATA  528

seq1  AGTACATTCACACATGCTTGCCCTTCAAAAGATTCAGAATCTTCAGCTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATTCACACATGCTTGCCCTTCAAAAGATTCAGAATCTTCAGCTAT  578

seq1  GGAAAGGATCCCGACCACGTAGTTAGTCTTCTCACCTGAGTCACTGGAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGATCCCGACCACGTAGTTAGTCTTCTCACCTGAGTCACTGGAGG  628

seq1  AATTTCCCAGTAAGACAGCATTCCTGAGTGTAGGGTTAGGACACTAGACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCCAGTAAGACAGCATTCCTGAGTGTAGGGTTAGGACACTAGACA  678

seq1  GCATGCTTTGAGAAGGGTGGAGTCACCATGCCCGAGCAAGAGCTCATTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCTTTGAGAAGGGTGGAGTCACCATGCCCGAGCAAGAGCTCATTTG  728

seq1  TTGGGCTTAAAAGTGCCTTGACTATATCATCCACAGGTGATGGAGGACAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCTTAAAAGTGCCTTGACTATATCATCCACAGGTGATGGAGGACAA  778

seq1  GGAGAAGGCAGCGGAGAGCTTGGTGAGCAACATGGAAGCTGCTCATTCTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGGCAGCGGAGAGCTTGGTGAGCAACATGGAAGCTGCTCATTCTC  828

seq1  CATCCCCTATCCACTGCCGCTGGCTCCGCCTCCAATATTTGGCGGCTACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCTATCCACTGCCGCTGGCTCCGCCTCCAATATTTGGCGGCTACT  878

seq1  AGCATTATCTGTGGCTGTTCTTGCCTGGGGATCATGGCTCTTGTGTTTGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTATCTGTGGCTGTTCTTGCCTGGGGATCATGGCTCTTGTGTTTGC  928

seq1  CATCAAGGTGAGGAATAAAATTCCTATGGGACTGGGAGGGTATAATGAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGGTGAGGAATAAAATTCCTATGGGACTGGGAGGGTATAATGAAA  978

seq1  TGACTGTATCTGATCTGTCTACAGTTACGGTTACTACATATCTTTTGATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTATCTGATCTGTCTACAGTTACGGTTACTACATATCTTTTGATG  1028

seq1  CTTAGCTCTGAGCTTAGTGACAGAGTAAGAATACTTTCTAAGGACTCGTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTCTGAGCTTAGTGACAGAGTAAGAATACTTTCTAAGGACTCGTG  1078

seq1  TCTTACGAAAACGAAAGTTGTAAAAATGGATAATTAGTAGAATTC  1144
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACGAAAACGAAAGTTGTAAAAATGGATAATTAGTAGAATTC  1123

seq1: chr4_40336851_40337026
seq2: B6Ng01-166F15.g_544_721 (reverse)

seq1  AAAGATTTGTTTA-CTATTATATATAAGTACACTGTAGCTGTCTTCAGAC  49
      |||||||| ||||  |||||||| ||||||||||| ||||||| ||||||
seq2  AAAGATTTATTTATTTATTATATGTAAGTACACTGCAGCTGTCCTCAGAC  50

seq1  ACACCAGAAGAGGGCATCAGATCTCATTACAGCTGGTTGTGAGCCACCAT  99
      || |||||||||||  |||||||||||||||| |||||||||||||||||
seq2  ACCCCAGAAGAGGGAGTCAGATCTCATTACAGATGGTTGTGAGCCACCAT  100

seq1  GTGGTTGCTGGGATTTGAACTCAGGCCCTTCGGAAGAGCAATC-AGTGCT  148
      |||||||||||||||||||||| || |||| ||||||||| ||  |||||
seq2  GTGGTTGCTGGGATTTGAACTCCGGACCTTTGGAAGAGCAGTCGGGTGCT  150

seq1  CTTACCCGCTGGGCCATCTCACCAGCCC  176
      ||||||| ||| ||||||||||||||||
seq2  CTTACCCACTGAGCCATCTCACCAGCCC  178