BAC Information

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BAC

Clone NameB6Ng01-166I10
Chromosome7 (Build37)
Map Location 96,078,966 - 96,175,848
singlet/doubletdoublet
Overlap genenone
Upstream geneGrm5, Ctsc, LOC100039756, Rab38, LOC100039924, LOC666598, EG621562
Downstream geneTmem135, LOC100039969, Fzd4, Prss23, LOC100040001, Me3, Ccdc81, l7Rn6, Eed
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166I10.bB6Ng01-166I10.g
ACCDH958284DH958285
length1,211746
definitionDH958284|Mus musculus domesticus DNA, BAC clone: B6Ng01-166I10, 5' end.DH958285|Mus musculus domesticus DNA, BAC clone: B6Ng01-166I10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,174,619 - 96,175,848)(96,078,966 - 96,079,380)
sequence
gaattccacattcagagaaaatatttttaaaaactgaaaatgatattgtg
acttcttcagactgaactaagtttatcaccagctgacttgcactatagta
aacacaggaagtcctacaagcagcagcaggcaatggaagcaggtagaagt
gtggatatatacaaagcgatgaagcaactgcatagatgtatacaagactg
taagacagttttctttttatttgcatttatttaaatggcaacggctagac
taaaggtggtagagtgtttatattacatgtctaagtaacacacgtgacaa
cagtagcaacaaggcctagaatagaaaaataactgatgatgtataacttt
cctgagggggggggaaatgtacgtgcacctacttaaaagatgttatttga
gggctggagagatggctctgcagttaaaagtgtttgctgtttctttagag
ggttatagttcagttcttagcacttagatcctgtgtctcccaaactcctg
gtctagggagtctggtgcccagttctggactccatggcaacaaaggcaca
cacacacacacacacacacacacacacacacacacacacactcacatgaa
cacatatgcacacccacatgctcacattcccacatggtaacatacacctt
ttaaaaatgatatgctgtgcaaaatacaaatttaactgtacctagaaata
tttcccttatttaagtatcaacacaaaccagactaagttgtacagcctta
tcccaggaccaaaaaatggaaactagaaatctgtacctctgtgagggtca
agcattggatcttgctggtgttgccagtatatacagttggaagcatgcag
ttgaggttgaaaaaaaatttgagttgagtcatgaaactaaaatacctgtc
actgcaagctgtgtggagcccaattttcaatgaattgaattgtaaattgc
tgaatatagtaattattgtagcagatgtacagtaattagtttgggacatt
aggattttgttttgggaattttaaatctcttccagagagaagctgtgctg
ttagaatttgcttgacctccagtgttttcatgttaaattctttagcgagc
aggtttgctctcagtgttaatgctgggtggaagagattggcctctgaatc
ttatggagttacatggaacacaattggcattacctgaattcaatgttacc
tactcatatat
gaattcagaggcacttttccaagcagagaaattcagtgaggaaccaagag
aagccagtttgaatcagtcagtctgaaaaggagttttgggccagaacagc
tgagttgaattagccaggcagtgttcagaaagaactagaaagggtgaatt
tattcagcagtaagtctccaggacaataattacatatggcaaatatccta
cagaaagctatagaggataaaatcacctgggataatctcttgaggaagca
tttgttcttttataaaaattatttttacataataacaaatcaccagttca
gaaacatacacattgaagcatcattatacttaggaatacacacacacaca
cacacacacacacacacacacacatatatatatatgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtattcctaagtataatgatgcttcaatgtg
tatgtttctgaactggtgatttgttattatgtaaaaataatttttataaa
agaacaaatgcttcctcaagagattatcccaggtgattttatcctctata
gctttctgtaggatatttgccatatgtaattattgtcctggagacttact
gctgaataaattcaccctttctagttctttctgaacactgcctggctaat
tcaactcagctgttctggcccaaaactccttttcagactgactgattcaa
actggcttctcttggttcctcactgaatttctctgcttggaaaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_96174619_96175848
seq2: B6Ng01-166I10.b_44_1254 (reverse)

seq1  ATATATGAGTTAGTTATTACATTAGAAAATCAGTATAATG-CATATGTGT  49
      ||||||||| ||| ||  |||||   || ||||  ||||| ||  |||||
seq2  ATATATGAG-TAGGTA--ACATT--GAATTCAG-GTAATGCCAATTGTGT  44

seq1  TCCATGTACCTCATTATGATTCTAGAGCCAAATCTCTT-CACCCAGCATT  98
      |||||||| |||  || ||||| |||| | |||||||| |||||||||||
seq2  TCCATGTAACTCCATAAGATTC-AGAGGCCAATCTCTTCCACCCAGCATT  93

seq1  ACACACTGAAGAGCAAAACCTTGGCTCGCTAAAGGAAATTTAACATTGAA  148
      | |||||| ||||| ||||||  |||||||||||  ||||||||| ||||
seq2  A-ACACTG-AGAGC-AAACCT--GCTCGCTAAAG--AATTTAACA-TGAA  135

seq1  AACACTGGAGTTCAAGCAAAATTCTATACAGGCACAGCTTCTCTCTTGGA  198
      |||||||||| |||||| |||||||| ||| |||||||||||||| ||||
seq2  AACACTGGAGGTCAAGC-AAATTCTA-ACA-GCACAGCTTCTCTC-TGGA  181

seq1  AGAGATTTAAAAATTCCCAAAACAAAAATCTTAATGTCCCAAACTAATTA  248
      |||||||| |||||||||||||| |||||| |||||||||||||||||||
seq2  AGAGATTT-AAAATTCCCAAAAC-AAAATCCTAATGTCCCAAACTAATTA  229

seq1  CTGTACATCTGCTACAATAATTACTATATTCAGCAATTTACAATTCAATT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACATCTGCTACAATAATTACTATATTCAGCAATTTACAATTCAATT  279

seq1  CTTTGAAAATTGGGCTCCACACAGCTTGCAGTGACAGGTATTTTAGTTTC  348
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAAAATTGGGCTCCACACAGCTTGCAGTGACAGGTATTTTAGTTTC  329

seq1  ATGACTCAACTCAAATTTTTTTTCAACCTCAACTGCATGCTTCCAACTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCAACTCAAATTTTTTTTCAACCTCAACTGCATGCTTCCAACTGT  379

seq1  ATATACTGGCAACACCAGCAAGATCCAATGCTTGACCCTCACAGAGGTAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTGGCAACACCAGCAAGATCCAATGCTTGACCCTCACAGAGGTAC  429

seq1  AGATTTCTAGTTTCCATTTTTTGGTCCTGGGATAAGGCTGTACAACTTAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCTAGTTTCCATTTTTTGGTCCTGGGATAAGGCTGTACAACTTAG  479

seq1  TCTGGTTTGTGTTGATACTTAAATAAGGGAAATATTTCTAGGTACAGTTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTTGTGTTGATACTTAAATAAGGGAAATATTTCTAGGTACAGTTA  529

seq1  AATTTGTATTTTGCACAGCATATCATTTTTAAAAGGTGTATGTTACCATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTATTTTGCACAGCATATCATTTTTAAAAGGTGTATGTTACCATG  579

seq1  TGGGAATGTGAGCATGTGGGTGTGCATATGTGTTCATGTGAGTGTGTGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATGTGAGCATGTGGGTGTGCATATGTGTTCATGTGAGTGTGTGTG  629

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTTTGTTGCCATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTTTGTTGCCATG  679

seq1  GAGTCCAGAACTGGGCACCAGACTCCCTAGACCAGGAGTTTGGGAGACAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCAGAACTGGGCACCAGACTCCCTAGACCAGGAGTTTGGGAGACAC  729

seq1  AGGATCTAAGTGCTAAGAACTGAACTATAACCCTCTAAAGAAACAGCAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTAAGTGCTAAGAACTGAACTATAACCCTCTAAAGAAACAGCAAA  779

seq1  CACTTTTAACTGCAGAGCCATCTCTCCAGCCCTCAAATAACATCTTTTAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTAACTGCAGAGCCATCTCTCCAGCCCTCAAATAACATCTTTTAA  829

seq1  GTAGGTGCACGTACATTTCCCCCCCCCTCAGGAAAGTTATACATCATCAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTGCACGTACATTTCCCCCCCCCTCAGGAAAGTTATACATCATCAG  879

seq1  TTATTTTTCTATTCTAGGCCTTGTTGCTACTGTTGTCACGTGTGTTACTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTCTATTCTAGGCCTTGTTGCTACTGTTGTCACGTGTGTTACTT  929

seq1  AGACATGTAATATAAACACTCTACCACCTTTAGTCTAGCCGTTGCCATTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGTAATATAAACACTCTACCACCTTTAGTCTAGCCGTTGCCATTT  979

seq1  AAATAAATGCAAATAAAAAGAAAACTGTCTTACAGTCTTGTATACATCTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGCAAATAAAAAGAAAACTGTCTTACAGTCTTGTATACATCTA  1029

seq1  TGCAGTTGCTTCATCGCTTTGTATATATCCACACTTCTACCTGCTTCCAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTGCTTCATCGCTTTGTATATATCCACACTTCTACCTGCTTCCAT  1079

seq1  TGCCTGCTGCTGCTTGTAGGACTTCCTGTGTTTACTATAGTGCAAGTCAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCTGCTGCTTGTAGGACTTCCTGTGTTTACTATAGTGCAAGTCAG  1129

seq1  CTGGTGATAAACTTAGTTCAGTCTGAAGAAGTCACAATATCATTTTCAGT  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGATAAACTTAGTTCAGTCTGAAGAAGTCACAATATCATTTTCAGT  1179

seq1  TTTTAAAAATATTTTCTCTGAATGTGGAATTC  1230
      ||||||||||||||||||||||||||||||||
seq2  TTTTAAAAATATTTTCTCTGAATGTGGAATTC  1211

seq1: chr7_96078966_96079380
seq2: B6Ng01-166I10.g_69_483

seq1  GAATTCAGAGGCACTTTTCCAAGCAGAGAAATTCAGTGAGGAACCAAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGGCACTTTTCCAAGCAGAGAAATTCAGTGAGGAACCAAGAG  50

seq1  AAGCCAGTTTGAATCAGTCAGTCTGAAAAGGAGTTTTGGGCCAGAACAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGTTTGAATCAGTCAGTCTGAAAAGGAGTTTTGGGCCAGAACAGC  100

seq1  TGAGTTGAATTAGCCAGGCAGTGTTCAGAAAGAACTAGAAAGGGTGAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGAATTAGCCAGGCAGTGTTCAGAAAGAACTAGAAAGGGTGAATT  150

seq1  TATTCAGCAGTAAGTCTCCAGGACAATAATTACATATGGCAAATATCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGCAGTAAGTCTCCAGGACAATAATTACATATGGCAAATATCCTA  200

seq1  CAGAAAGCTATAGAGGATAAAATCACCTGGGATAATCTCTTGAGGAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGCTATAGAGGATAAAATCACCTGGGATAATCTCTTGAGGAAGCA  250

seq1  TTTGTTCTTTTATAAAAATTATTTTTACATAATAACAAATCACCAGTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTTTTATAAAAATTATTTTTACATAATAACAAATCACCAGTTCA  300

seq1  GAAACATACACATTGAAGCATCATTATACTTAGGAATACACACACACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATACACATTGAAGCATCATTATACTTAGGAATACACACACACACA  350

seq1  CACACACACACACACACACACACATATATATATATGTGTGTGTGTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACATATATATATATGTGTGTGTGTGTGTG  400

seq1  TGTGTGTGTGTGTGT  415
      |||||||||||||||
seq2  TGTGTGTGTGTGTGT  415