BAC Information

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BAC

Clone NameB6Ng01-166K15
Chromosome7 (Build37)
Map Location 10,752,753 - 10,753,895
singlet/doubletsinglet
Overlap geneVmn2r52
Upstream geneEG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894, Vmn2r47, 2810047C21Rik, LOC665625, LOC545911, EG625580, LOC100042163, LOC625605, EG434117, EG628152, LOC100042921
Downstream geneLOC665663, V1re11, LOC628521, LOC628525, LOC100042206, Nlrp4d, LOC100042214, V1re10, Zik1, EG628580, V1re9, V1rl1, EG628596, Nlrp4b, LOC333184, V1re13, BQ559217, LOC637237, LOC236479, EG665879, Zscan4b, LOC665793, EG665798, Gm397, Zscan4-ps1, LOC635187, LOC100042997, LOC100042293, Zscan4d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166K15.bB6Ng01-166K15.g
ACCDH958377DH958378
length1,1331,239
definitionDH958377|Mus musculus domesticus DNA, BAC clone: B6Ng01-166K15, 5' end.DH958378|Mus musculus domesticus DNA, BAC clone: B6Ng01-166K15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttgcagttcaacatgaatagtttataggggcttcttatactt
attcacatgcacatgtggaataaatatttggcatcaataattccagatgt
tctgaatatagaattcacagtttcaactatagtttcaaaaataaagtatt
cttggtaataaaaagtggataactatcactcaattgtctatcactacctc
gtgcttcaatcactactatttaatatataagatatgaagtaggatttcct
ggtcctttctcgcagctcagtttcatatgtctatttaccataatgtgtta
tgaaaatttttctcctattatgatgtcttaatttttgtttaatcttattt
tactttattattctcccacagaatcctgttatttcctaatgaggaacaga
aaatgtgtctgatggaaaaggctgttgggagggaaataaaagtattaact
atgatgtattgcacgtaaaactgagaattggtcatatctcagtacaagga
aagggaactgtaggtaggatatgttgtgtgagagcaacatactattttca
ataaataaaaaagaaatctcaattaaaaaaaagtctcactgttctcagac
aatgaactttctcctgtgtgttctggtttttttctcttttcggatggtta
ggtgtttttttcaagaattattctataaatatccatctcaaattttctca
aatttttattgttctcaaatgtcttttttccctcttattaaacattatag
ttttcctcatttttgtaaataaagaaatgttctcttatatttgaacacgt
ctccccaccctctgcaggcaactaaagaatgtcttcaaaataaagcagtg
ttgttgtctttgatttcatttagagaattttaacacgagtgtacaattat
aacttaaaattatttgttgcttttacctggttcctgtttttgctgtattt
gaggtgtggtaatagctatttctttgcctgatgtttagtgcagtctatat
gttcctttgaaattctgttcatcctaattaaaatgtgaagggttctccat
tattaaaatgtcatgttggtgtggaatatgaaatttggaattgggtcatt
aatggaacacgtagaaccttttgttttggggaa
gaattccagggacagaatgaagaaattaattctgttatggtagatgctcc
tgggaagatattggtatggaagatctagaaaaatcagaatttatgcccat
gatcccaaaacaagatactgtatggattgaattttaaaatttaccaaagg
ggacactggtgaaatatcaatagctttgcccctaaaatagttatcaaaca
gactatttttgataagagtagtggccaataataaaagaaaaattgcaggt
acttgaacaactggtaaaagaaaccttcagcatatagaagagtctaccag
tcctttggaattcccctgtgtttgttttcaaaatagaaatctggaaatta
gaggatgataatggatttaagagcatttaaataattcaggcaataggccc
tttacagcctggacttcctttaccatctgtgatactgagaacctggcctg
taattataattgacttgaaagactgatatttgcaaaaccttcacatgagt
atgcaaagagaagatagtattaagggatagattttcttagctcataaaca
atgtacaaaacatggtaagatttcttagttaattataaaagattaagtaa
gattatgttaattgtcaggaacagatcaggccaaaattgtagtacatctt
acaaatgctgagattgtatcattacaagtggtcaatgaagactggcaaag
agctcatattaactacttgggagaaatgaataacaagtacccgaaaaaca
aaaatatacagcttataaaaagaaaaaaaattgtactctttaacttctag
taaagagaacaccaactccagaggcaccaacatatgaatgcaaataagat
ggagatggcaggttatgaatcagtcaaaagaagcaaggtccacaaaagtc
catttctatcagtttaaaatttggaatcatatggattccttatagtatta
ttagtttatattgactatcttaacacatcacagattattttgtatgcaga
gagttgttttgcataatcgagtgctgaatttgtactgataactcagatta
tccttactatttggtgcaattgcgaaatgccatcagaggtataacatcag
tttaatactatgtataattcagtctctcatataggttttcagtccatagt
ttgaaggaatttccaatttgacattaatctaggagcatttatttggatct
caaaaggtttaagaaaaaaatccctcctctgttccaccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_10752753_10753895
seq2: B6Ng01-166K15.b_44_1176

seq1  GAATTCTTTTGCAGTTCAACATGAATAGTTTATAGGGGCTTCTTATACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGCAGTTCAACATGAATAGTTTATAGGGGCTTCTTATACTT  50

seq1  ATTCACATGCACATGTGGAATAAATATTTGGCATCAATAATTCCAGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACATGCACATGTGGAATAAATATTTGGCATCAATAATTCCAGATGT  100

seq1  TCTGAATATAGAATTCACAGTTTCAACTATAGTTTCAAAAATAAAGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATATAGAATTCACAGTTTCAACTATAGTTTCAAAAATAAAGTATT  150

seq1  CTTGGTAATAAAAAGTGGATAACTATCACTCAATTGTCTATCACTACCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTAATAAAAAGTGGATAACTATCACTCAATTGTCTATCACTACCTC  200

seq1  GTGCTTCAATCACTACTATTTAATATATAAGATATGAAGTAGGATTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCAATCACTACTATTTAATATATAAGATATGAAGTAGGATTTCCT  250

seq1  GGTCCTTTCTCGCAGCTCAGTTTCATATGTCTATTTACCATAATGTGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTTCTCGCAGCTCAGTTTCATATGTCTATTTACCATAATGTGTTA  300

seq1  TGAAAATTTTTCTCCTATTATGATGTCTTAATTTTTGTTTAATCTTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATTTTTCTCCTATTATGATGTCTTAATTTTTGTTTAATCTTATTT  350

seq1  TACTTTATTATTCTCCCACAGAATCCTGTTATTTCCTAATGAGGAACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTATTATTCTCCCACAGAATCCTGTTATTTCCTAATGAGGAACAGA  400

seq1  AAATGTGTCTGATGGAAAAGGCTGTTGGGAGGGAAATAAAAGTATTAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTCTGATGGAAAAGGCTGTTGGGAGGGAAATAAAAGTATTAACT  450

seq1  ATGATGTATTGCACGTAAAACTGAGAATTGGTCATATCTCAGTACAAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTATTGCACGTAAAACTGAGAATTGGTCATATCTCAGTACAAGGA  500

seq1  AAGGGAACTGTAGGTAGGATATGTTGTGTGAGAGCAACATACTATTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAACTGTAGGTAGGATATGTTGTGTGAGAGCAACATACTATTTTCA  550

seq1  ATAAATAAAAAAGAAATCTCAATTAAAAAAAAGTCTCACTGTTCTCAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAAAAAGAAATCTCAATTAAAAAAAAGTCTCACTGTTCTCAGAC  600

seq1  AATGAACTTTCTCCTGTGTGTTCTGGTTTTTTTCTCTTTTCGGATGGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACTTTCTCCTGTGTGTTCTGGTTTTTTTCTCTTTTCGGATGGTTA  650

seq1  GGTGTTTTTTTCAAGAATTATTCTATAAATATCCATCTCAAATTTTCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTTTTTCAAGAATTATTCTATAAATATCCATCTCAAATTTTCTCA  700

seq1  AATTTTTATTGTTCTCAAATGTCTTTTTTCCCTCTTATTAAACATTATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTATTGTTCTCAAATGTCTTTTTTCCCTCTTATTAAACATTATAG  750

seq1  TTTTCCTCATTTTTGTAAATAAAGAAATGTTCTCTTATATTTGAACACGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCATTTTTGTAAATAAAGAAATGTTCTCTTATATTTGAACACGT  800

seq1  CTCCCCACCCTCTGCAGGCAACTAAAGAATGTCTTCAAAAATAAAGCAGT  850
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTCCCCACCCTCTGCAGGCAACTAAAGAATGTCTTC-AAAATAAAGCAGT  849

seq1  GTTGTTGTCTTTGATTTCATTTAGAGAATTTTAACACGAGTGTACAATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTCTTTGATTTCATTTAGAGAATTTTAACACGAGTGTACAATTA  899

seq1  TAACTTAAAATTATTTGTTGCTTTTACCTGGTTCCTGTTTTTGCTGTATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTAAAATTATTTGTTGCTTTTACCTGGTTCCTGTTTTTGCTGTATT  949

seq1  TGAGGTGTGGTAATAGCTATTTCTTTGCCTGATGTTTTAGTGCAGTCTAT  1000
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGAGGTGTGGTAATAGCTATTTCTTTGCCTGATG-TTTAGTGCAGTCTAT  998

seq1  ATGTTCCTTTGAAATTCTGTTCATCTTAATTAAAAATGTGAAGGGGTTCT  1050
      ||||||||||||||||||||||||| ||||| |||||||||| |||||| 
seq2  ATGTTCCTTTGAAATTCTGTTCATCCTAATT-AAAATGTGAA-GGGTTC-  1045

seq1  TCCATTTATTAAAATGTCATGTTGTTGT-GAATATGAATTTTTGTAATTG  1099
      |||| ||||||||||||||||||| ||| |||||||||  |||| |||||
seq2  TCCA-TTATTAAAATGTCATGTTGGTGTGGAATATGAA-ATTTGGAATTG  1093

seq1  TGTTCATTAAT-GAACACGGTAAGTATCCTTTTGTTTTGTGGGAA  1143
       | |||||||| |||||| |||   | |||||||||||| |||||
seq2  -GGTCATTAATGGAACAC-GTA--GAACCTTTTGTTTTG-GGGAA  1133