BAC Information

Click to search

BAC

Clone NameB6Ng01-166O22
Chromosome7 (Build37)
Map Location 65,257,949 - 65,259,034
singlet/doubletsinglet
Overlap genenone
Upstream geneGabrg3, Gabra5, Gabrb3, EG668807, LOC434189
Downstream geneAtp10a, LOC621446, LOC668811, LOC668813
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166O22.bB6Ng01-166O22.g
ACCDH958568DH958569
length1,2101,066
definitionDH958568|Mus musculus domesticus DNA, BAC clone: B6Ng01-166O22, 5' end.DH958569|Mus musculus domesticus DNA, BAC clone: B6Ng01-166O22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgttgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcacctattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttcttcttcagggacttgaagtttttatcatac
agatctttcacttccttcgttagagtcacgccgagatattttatatattt
gtggctattgagaaggtgttgtttccctaatttctttctcagcctgttta
ttctttgtgtaagagaatgccattgactgtttgagttaattttatatttc
agctacttcactgaagctgtttatcaggttaggagttctcttgtgattta
ggtaccttttattatactatctatacatctcgcaaggggaattggactcc
tcgtgcaatgtatccttgtaatgtccctttgtggtggcgatattggctct
gcggctgcat
gaattctacatctagatccaaagacagcaggagactgtgtcactaggcct
agcttgagcatatgagagctcagggctacttttacagtgatctacttctt
cccagaaagaccacacaactccaaaagggtcatacctcctaatagagcta
ctccctttctgccaagtattcaaatacatgagtctatggggagcattcct
attcaaacaaattatgaatggcaaaataagctggcagaaataataggtga
tagggctctagaccttagtggggcctgagagcttagcacaacttactcca
tcgtgtatgttccatttaggctgtaaaacttagcacctaaacagcaccac
ctgacaaaactaaaacaaacgcctaatccatcaaaatatataattctggt
agtgtctctaaatgtacaaatactgctgtcttacttctgtagttctactt
ttagctaatagttcttgttaactgaagtatgtcatggtttttgtctttaa
aattcaccctgggaaaagggcatgactacattggcattcacaaatcctag
tatagtcacctgctggtgaataacaactttccattggctcaaacctatgt
ctgagcagtcttctctcataaatattccacaacagaatatattcccctca
ataaaaatactttatttaggtttaccatcaaagcagcaatggtttgatgg
gagagataccccatttcttttgtcccttatgaagttgctgtatgtcctac
tagggatatctctttcatcccctacggatccactcccttatctacctaca
cccacaatatatgcaatcctccttgactccagctttacattatacagaac
agtgcatcttgtttgttaagagacagtctggaggtggaaggagatggaat
tgggggccatcatttttatctaaagattttgttcctagagtccctcccaa
gttccagcactctctacctcagctatacctcaataccccgaacactttat
tgactgctcccaaatagtctactcttgcagagttttgtgctactcctcct
ttcatcatgatgaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_65257949_65259034
seq2: B6Ng01-166O22.g_67_1132

seq1  GAATTCTACATCTAGATCCAAAGACAGCAGGAGACTGTGTCACTAGGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATCTAGATCCAAAGACAGCAGGAGACTGTGTCACTAGGCCT  50

seq1  AGCTTGAGCATATGAGAGCTCAGGGCTACTTTTACAGTGATCTACTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGAGCATATGAGAGCTCAGGGCTACTTTTACAGTGATCTACTTCTT  100

seq1  CCCAGAAAGACCACACAACTCCAAAAGGGTCATACCTCCTAATAGAGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAAGACCACACAACTCCAAAAGGGTCATACCTCCTAATAGAGCTA  150

seq1  CTCCCTTTCTGCCAAGTATTCAAATACATGAGTCTATGGGGAGCATTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTTCTGCCAAGTATTCAAATACATGAGTCTATGGGGAGCATTCCT  200

seq1  ATTCAAACAAATTATGAATGGCAAAATAAGCTGGCAGAAATAATAGGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAACAAATTATGAATGGCAAAATAAGCTGGCAGAAATAATAGGTGA  250

seq1  TAGGGCTCTAGACCTTAGTGGGGCCTGAGAGCTTAGCACAACTTACTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTCTAGACCTTAGTGGGGCCTGAGAGCTTAGCACAACTTACTCCA  300

seq1  TCGTGTATGTTCCATTTAGGCTGTAAAACTTAGCACCTAAACAGCACCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGTATGTTCCATTTAGGCTGTAAAACTTAGCACCTAAACAGCACCAC  350

seq1  CTGACAAAACTAAAACAAACGCCTAATCCATCAAAATATATAATTCTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAAAACTAAAACAAACGCCTAATCCATCAAAATATATAATTCTGGT  400

seq1  AGTGTCTCTAAATGTACAAATACTGCTGTCTTACTTCTGTAGTTCTACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTCTAAATGTACAAATACTGCTGTCTTACTTCTGTAGTTCTACTT  450

seq1  TTAGCTAATAGTTCTTGTTAACTGAAGTATGTCATGGTTTTTGTCTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTAATAGTTCTTGTTAACTGAAGTATGTCATGGTTTTTGTCTTTAA  500

seq1  AATTCACCCTGGGAAAAGGGCATGACTACATTGGCATTCACAAATCCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACCCTGGGAAAAGGGCATGACTACATTGGCATTCACAAATCCTAG  550

seq1  TATAGTCACCTGCTGGTGAATAACAACTTTCCATTGGCTCAAACCTATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTCACCTGCTGGTGAATAACAACTTTCCATTGGCTCAAACCTATGT  600

seq1  CTGAGCAGTCTTCTCTCATAAATATTCCACAACAGAATATATTCCCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAGTCTTCTCTCATAAATATTCCACAACAGAATATATTCCCCTCA  650

seq1  ATAAAAATACTTTATTTAGGTTTACCATCAAAGCAGCAATGGTTTGATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATACTTTATTTAGGTTTACCATCAAAGCAGCAATGGTTTGATGG  700

seq1  GAGAGATACCCCATTTCTTTTGTCCCTTATGAAGTTGCTGTATGTCCTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATACCCCATTTCTTTTGTCCCTTATGAAGTTGCTGTATGTCCTAC  750

seq1  TAGGGATATCTCTTTCATCCCCTACGGATCCACTCCCTTATCTACCTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGATATCTCTTTCATCCCCTACGGATCCACTCCCTTATCTACCTACA  800

seq1  CCCACAATATATGCAATCCTCCTTGACTCCAGCTTTACATTATACAGAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAATATATGCAATCCTCCTTGACTCCAGCTTTACATTATACAGAAC  850

seq1  AGTGCATCTTGTTTGTTAAGGAGACAGTCTGGAGGTGGAAGGAAGATGGA  900
      ||||||||||||||||||| |||||||||||||||||||||| |||||||
seq2  AGTGCATCTTGTTTGTTAA-GAGACAGTCTGGAGGTGGAAGG-AGATGGA  898

seq1  ATTGGGGGCCATCATTTTTATCTAAAGATTTTTGTTCCCTAAGAGTCCCC  950
      |||||||||||||||||||||||||||| |||||||||   ||||| |||
seq2  ATTGGGGGCCATCATTTTTATCTAAAGA-TTTTGTTCC--TAGAGT-CCC  944

seq1  TCCCAAGTTCCAGCACTCTCCTACCTCCAGCTATACCTCAAATTACCCCG  1000
      ||||||||||||||||||| |||||| ||||||||||||||  |||||||
seq2  TCCCAAGTTCCAGCACTCT-CTACCT-CAGCTATACCTCAA--TACCCCG  990

seq1  AACACTTTATTGAACCTGCTCCCAAATAGTTCTAACTCTTGCAAGAGTTT  1050
      |||||||||||||  |||||||||||||| ||| |||||||| |||||||
seq2  AACACTTTATTGA--CTGCTCCCAAATAG-TCT-ACTCTTGC-AGAGTTT  1035

seq1  TGTGGCTTACTCCTCCTTTCCATCCATGAATGAAGT  1086
      ||||   |||||||||||| ||| |||| |||||||
seq2  TGTG--CTACTCCTCCTTT-CAT-CATG-ATGAAGT  1066