BAC Information

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BAC

Clone NameB6Ng01-167H03
Chromosome7 (Build37)
Map Location 135,015,270 - 135,127,051
singlet/doubletdoublet
Overlap geneZfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus
Upstream gene1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a
Downstream genePycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167H03.bB6Ng01-167H03.g
ACCDH958940DH958941
length5771,128
definitionDH958940|Mus musculus domesticus DNA, BAC clone: B6Ng01-167H03, 5' end.DH958941|Mus musculus domesticus DNA, BAC clone: B6Ng01-167H03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,126,469 - 135,127,051)(135,015,270 - 135,016,421)
sequence
aattcccagcaaccacatggtggctcacaaccatctataaaaaaggatct
gatgccctcttctggtttatctgaagacagctacagtgtactcatataac
taaatcttaaaaaaaaaaaaccttcagtggaggtacaaatcaatggtcag
ctcttgtcaacattatgaagactgtaatcttgtaaaccacaacacaaaac
ccatctttgcccaggcagttttaactgtgactgttctttgtgagtgtcac
ctataaaaagcaagttcatgctagagaactatgcaattggttggatgtga
tgatacacctcgtctttaatcagagaaaaatgagactttttttaaagcat
gttacttacatgctgggggttggtggtacacaactttaatcccaatacta
tggatacagaagcaaacagacctctgttcaaggccagcatggtctataaa
gaaaaactctacctcaaaaaaagcataacacaaaaataacagcatgtttc
agtttactgtttgtgatacattctgagacatgatgcttgcccatttcggg
aaaattgtcttttgggggggggggggt
gaattcatagcagtagcaaattacagttaggaagtagtggggtcactgca
ccatgaagaattgtattaaagggcagcagcgttaggaagttgagaagcac
tggactggaggctatgaatccagttcgcacacccatgctagacagctcac
agtggttaggctccagtggactggacactccccaaccccactgttgccac
accctagtccttttctcctcctcctttcttttattttcttctggtttttc
aagacagggtttctctatagccctggtgttctcaaactcagaggtccacc
tgccttagcctccccagtgctaggactataggtgtgtggcaccaagcata
tttatttgtatgtatgtaggtatgcagaggacaactgggagtcagcttgt
tttccaacttgttgaggtgggtggggtctcttactgttgctacactgtgt
aatccaggctagtttgttgacaagcctctgtagtacatctccctatagca
gtgctcgattacagatgtgtaccaccaaatttagcttttgcctcggtttg
ggggcttgaactcaggttgtcaggtttgtatggctagtgttttaacaggc
caaaccatctctgcaaccctgaaactggtacgttaaacaaactctcacca
ttccaactaacatgtaagaactaggtacgtgagccaggatataaaagggg
aaagtacttgcctgacagtgtgcggcactgggttctactctcagaaacac
aaacaaaagaaagaaacaaagagaaagagagagaacacattttttagatc
ttcaagtacttctaggaggaatcatttttactacaactctatataaaaat
cctcacaagggccgggcggtggtggcgcacgcctttagtcccagcacttg
gggaggcagaggcaggcggatttctgagttcaaggccagcctggtctaca
aagtgagttccagggcagccaggactacacagagaaccctgtctcaaaac
cagaaaaaaaaaaaacaaacaaacaacaaaaaaaaactcccagcagaaga
gtcccagcttattaagatgccagtcaagctcagctcttcacctagagctg
acagactttacaatcatctttgctcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_135126469_135127051
seq2: B6Ng01-167H03.b_48_630 (reverse)

seq1  ACCCCCCCCCCCCCAAAAGACAATTTTCCCGAAATGGGCAAGCATCATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCCCCCCCCCAAAAGACAATTTTCCCGAAATGGGCAAGCATCATGT  50

seq1  CTCAGAATGTATCACAAACAGTAAACTGAAACATGCTGTTATTTTTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAATGTATCACAAACAGTAAACTGAAACATGCTGTTATTTTTGTGT  100

seq1  TATGCTTTTTTTGAGGTAGAGTTTTTCTTTATAGACCATGCTGGCCTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTTTTTTGAGGTAGAGTTTTTCTTTATAGACCATGCTGGCCTTGA  150

seq1  ACAGAGGTCTGTTTGCTTCTGTATCCATAGTATTGGGATTAAAGTTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGTCTGTTTGCTTCTGTATCCATAGTATTGGGATTAAAGTTGTGT  200

seq1  ACCACCAACCCCCAGCATGTAAGTAACATGCTTTAAAAAAAGTCTCATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAACCCCCAGCATGTAAGTAACATGCTTTAAAAAAAGTCTCATTT  250

seq1  TTCTCTGATTAAAGACGAGGTGTATCATCACATCCAACCAATTGCATAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGATTAAAGACGAGGTGTATCATCACATCCAACCAATTGCATAGT  300

seq1  TCTCTAGCATGAACTTGCTTTTTATAGGTGACACTCACAAAGAACAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGCATGAACTTGCTTTTTATAGGTGACACTCACAAAGAACAGTCA  350

seq1  CAGTTAAAACTGCCTGGGCAAAGATGGGTTTTGTGTTGTGGTTTACAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAAAACTGCCTGGGCAAAGATGGGTTTTGTGTTGTGGTTTACAAGA  400

seq1  TTACAGTCTTCATAATGTTGACAAGAGCTGACCATTGATTTGTACCTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTCTTCATAATGTTGACAAGAGCTGACCATTGATTTGTACCTCCA  450

seq1  CTGAAGGTTTTTTTTTTTTAAGATTTAGTTATATGAGTACACTGTAGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGTTTTTTTTTTTTAAGATTTAGTTATATGAGTACACTGTAGCTG  500

seq1  TCTTCAGATAAACCAGAAGAGGGCATCAGATCCTTTTTTATAGATGGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGATAAACCAGAAGAGGGCATCAGATCCTTTTTTATAGATGGTTG  550

seq1  TGAGCCACCATGTGGTTGCTGGGAATTGAATTC  583
      |||||||||||||||||||||||||||||||||
seq2  TGAGCCACCATGTGGTTGCTGGGAATTGAATTC  583

seq1: chr7_135015270_135016421
seq2: B6Ng01-167H03.g_67_1194

seq1  GAATTCATAGCAGTAGCAAATTACAGTTAGGAAGTAGTGGGGTCACTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGCAGTAGCAAATTACAGTTAGGAAGTAGTGGGGTCACTGCA  50

seq1  CCATGAAGAATTGTATTAAAGGGCAGCAGCGTTAGGAAGTTGAGAAGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAAGAATTGTATTAAAGGGCAGCAGCGTTAGGAAGTTGAGAAGCAC  100

seq1  TGGACTGGAGGCTATGAATCCAGTTCGCACACCCATGCTAGACAGCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGGAGGCTATGAATCCAGTTCGCACACCCATGCTAGACAGCTCAC  150

seq1  AGTGGTTAGGCTCCAGTGGACTGGACACTCCCCAACCCCACTGTTGCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTAGGCTCCAGTGGACTGGACACTCCCCAACCCCACTGTTGCCAC  200

seq1  ACCCTAGTCCTTTTCTCCTCCTCCTTTCTTTTATTTTCTTCTGGTTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAGTCCTTTTCTCCTCCTCCTTTCTTTTATTTTCTTCTGGTTTTTC  250

seq1  AAGACAGGGTTTCTCTATAGCCCTGGTGTTCTCAAACTCAGAGGTCCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGGGTTTCTCTATAGCCCTGGTGTTCTCAAACTCAGAGGTCCACC  300

seq1  TGCCTTAGCCTCCCCAGTGCTAGGACTATAGGTGTGTGGCACCAAGCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTAGCCTCCCCAGTGCTAGGACTATAGGTGTGTGGCACCAAGCATA  350

seq1  TTTATTTGTATGTATGTAGGTATGCAGAGGACAACTGGGAGTCAGCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGTATGTATGTAGGTATGCAGAGGACAACTGGGAGTCAGCTTGT  400

seq1  TTTCCAACTTGTTGAGGTGGGTGGGGTCTCTTACTGTTGCTACACTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAACTTGTTGAGGTGGGTGGGGTCTCTTACTGTTGCTACACTGTGT  450

seq1  AATCCAGGCTAGTTTGTTGACAAGCCTCTGTAGTACATCTCCCTATAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGGCTAGTTTGTTGACAAGCCTCTGTAGTACATCTCCCTATAGCA  500

seq1  GTGCTCGATTACAGATGTGTACCACCAAATTTAGCTTTTGCCTCGGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCGATTACAGATGTGTACCACCAAATTTAGCTTTTGCCTCGGTTTG  550

seq1  GGGGCTTGAACTCAGGTTGTCAGGTTTGTATGGCTAGTGTTTTAACAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTGAACTCAGGTTGTCAGGTTTGTATGGCTAGTGTTTTAACAGGC  600

seq1  CAAACCATCTCTGCAACCCTGAAACTGGTACGTTAAACAAACTCTCACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCATCTCTGCAACCCTGAAACTGGTACGTTAAACAAACTCTCACCA  650

seq1  TTCCAACTAACATGTAAGAACTAGGTACGTGAGCCAGGATATAAAAGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACTAACATGTAAGAACTAGGTACGTGAGCCAGGATATAAAAGGGG  700

seq1  AAAGTACTTGCCTGACAGTGTGCGGCACTGGGTTCTACTCTCAGAAACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACTTGCCTGACAGTGTGCGGCACTGGGTTCTACTCTCAGAAACAC  750

seq1  AAACAAAAGAAAGAAACAAAGAGAAAGAGAGAGAACACATTTTTTAGATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAGAAAGAAACAAAGAGAAAGAGAGAGAACACATTTTTTAGATC  800

seq1  TTCAAGTACTTCTAGGAGGAATCATTTTTACTACAACTCTATATAAAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTACTTCTAGGAGGAATCATTTTTACTACAACTCTATATAAAAAT  850

seq1  CCTCACAAGGGCCGGGCGGTGGTGGCGCACGCCTTTAGTCCCAGCACTT-  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCTCACAAGGGCCGGGCGGTGGTGGCGCACGCCTTTAGTCCCAGCACTTG  900

seq1  GGGAGGCAGAGGCAGGCGGATTTCTGAGTTCAAGGCCAGCCTGGTCTACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGAGGCAGGCGGATTTCTGAGTTCAAGGCCAGCCTGGTCTACA  950

seq1  AAGTGAGTTCCAGGGCAGCCAGGACTACACAGAGAAACCCTGTCTCAAAA  999
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  AAGTGAGTTCCAGGGCAGCCAGGACTACACAGAG-AACCCTGTCTC-AAA  998

seq1  ACCAGAAAAAAAAAAAAACAAACAAAACAAAACAAAAAAAAAAACCTCAC  1049
      ||||| |||||||||||||||||      |||||| |||||||| ||| |
seq2  ACCAG-AAAAAAAAAAAACAAAC------AAACAACAAAAAAAAACTCCC  1041

seq1  AAGGCAGAAGAGTCCACAGCTAATTAAGATGCCCAAAGTCAAAGCTCAGC  1099
      |  |||||||||||| ||||| |||||||||||   |||| |||||||||
seq2  A--GCAGAAGAGTCC-CAGCTTATTAAGATGCC---AGTC-AAGCTCAGC  1084

seq1  TCTTCCAACCCTAGAGCTGGAGCAGGACTCTATACAATCACTCTTTGCTC  1149
      |||||    ||||||||||   |||    || |||||||| |||||||||
seq2  TCTTC---ACCTAGAGCTG--ACAG---ACTTTACAATCA-TCTTTGCTC  1125

seq1  ACT  1152
      |||
seq2  ACT  1128