BAC Information

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BAC

Clone NameB6Ng01-168K18
Chromosome7 (Build37)
Map Location 127,201,230 - 127,330,604
singlet/doubletdoublet
Overlap geneDnahc3, Tmem159, Zp2, Anks4b, Crym
Upstream geneGpr139, LOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1
Downstream geneAbca14, Abca15, Abca16, LOC668429, LOC546994, LOC100042914, E130201H02Rik, LOC637957, Uqcrc2, 4930408O21Rik, BC030336, E030013G06Rik, EG436008, LOC100043426, Eef2k, Polr3e, Cdr2, 4933427G17Rik, EG668548, Mettl9, LOC668456, Igsf6, Otoa
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168K18.bB6Ng01-168K18.g
ACCDH959851DH959852
length1,1811,126
definitionDH959851|Mus musculus domesticus DNA, BAC clone: B6Ng01-168K18, 5' end.DH959852|Mus musculus domesticus DNA, BAC clone: B6Ng01-168K18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,329,414 - 127,330,604)(127,201,230 - 127,202,365)
sequence
gaattcaatgtgtagtgttcatgagtaagatcttaccaaaatacagtctc
atttgctttccctgtgactgtagctactttcctactataaaggcagaact
gggccatgtgatagagacaatatgatgtatggagcttaaactattcactg
agcctcaagtgaaatgttgctgacctctgaactcgaccttagaggttaga
aaatgtggaaatgtcttacttagtaacatactcctcttgttgaccagccc
tttctatgctgagtctgggcaagcatttatggttatcactatggacctta
gcatgcaaacagggcatcagaagatagccagagtcatttgagggcaaagt
tgttctgacaaaaaaagtgaagcaaatttctatccattccagggatggca
gtggaagacctggttgcagccaaattagtatatgattcttggtcatctgg
caagtgagttgaaggaaccgtgcctgagttggccatcacagctcaacact
gtttcacaagtgtcaaaatcaaaggaggtccagtccccagtgaatggtag
tgattgtcattcataagtactgacacccctattcatgtttgtggttggat
agctaaaccaggtaaccatttcttctgttaaggggtgatggccacattat
ctacccttgatcttactagtcttgtatctctctgaaataaatcatttcca
cttcttctgtgtgtcctttgacaactttctatgggaaagaaataaaagta
tcaaatgcccactcaatccctagaggattggattaaaaatttctctattt
taattgagtagaagtcaccataaaaccatttttattctccctccatcccc
cctgcctctgtgtgtgtgtgtgtgtgtagccatgctacacaccagatcaa
acccagagcttcacacatgctaggcaaacacactttctttaagctacatc
cctggcacagctcacgactttaagcattacatttcagtgggtttcggtga
cttttaaacaaccaagtcaggatgatcccatgccctgcagaaactgattc
ccaacagtgtcaccaactcttccagcaggtctactgctacgaattgccct
cttcagagactttcattacatcgaaatccacagaagaagctctggtggtg
ttttaaatagttgagaagatcagaatcaagg
gaattcaaataaagtgtgcaacataatgtctggggtctatacctgagtgg
agagtgcctaggagtgctaggagtggttggggttagtgcttactcgagga
cagcaggggaacagagaacacatgggagagaaggaatggagacctctgga
gtggttttcagttttaataatagttgacatcattgagttgctggggctcc
aacttagaggctcctacatgctaggcaagcactctatcactgagttgcag
tcttggctctaagggatgttctttccacattaatgaagacattttgaata
gtgccatgcaaggaaaaaaatctggcactctaaaaggacacctgtccacc
cagcattcttagtttcctacataggccaaaggtctaggccatccacatcc
atggggttagaagctcaatgagcatccatagagccagatgcccttggcag
atttcctttagggcagtggcccatgtaatgacctctcaccgccttcttgc
acagcatcccaatccttgctagggtcctaagtctcctgctttactgtgat
attgaagacagctcctccctgtagacagaccctgaactcatgcagcaaga
ctcctgtcttccaatagagatcatcatgctttcttccacaggcttagggg
tccatgcaacatattgtgtgtggagagattggctccttccagggaccaga
acctcagtcttatgcatatttctgagaggagaatcaacctgtgtcaagtt
ggccgcattgccactccacatagcaacaccccagtggagcagatttcaag
gccacttgaatgtgacaatcactttagaaacacatcaagccttccttttt
gggtttgtgttcacaccacacttgtcaccctcacacttcattacttataa
aaatcctaactatttttagggggaatatttattattctaatttataggct
taaagagctaaagagtgcaactctttgtgggtttttttttttgagacagg
ccttactctgtagcccagttacctgatctactatgtagctatttggagct
tctcaaatactggattctaaggaaattgttattaatgcactcagtgtgca
aatcctttctggaactagcctgctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_127329414_127330604
seq2: B6Ng01-168K18.b_45_1225 (reverse)

seq1  CCTTGA-TCTGTACTTCTTCAACTATTTAAAATACACACAGGAAGCTACA  49
      |||||| ||||  |||| |||||||||||||| ||   |||  |||| | 
seq2  CCTTGATTCTGATCTTC-TCAACTATTTAAAACACCACCAG--AGCTTC-  46

seq1  TTACGTGTGATTGGATGTACATGAAAGTTCTTGAAGAGGCAAATCTGTAG  99
      ||  |||   || |||||| ||||||||   ||||||||  |||  ||||
seq2  TTCTGTGGATTTCGATGTA-ATGAAAGTCTCTGAAGAGGGCAATTCGTAG  95

seq1  CAGTAGAAACTGCTGGGAAGAAGGTGGTGACACTGTTGGGAATCAGGTTT  149
      |||||| | ||||| ||||| || ||||||||||||||||||||| ||||
seq2  CAGTAG-ACCTGCT-GGAAG-AGTTGGTGACACTGTTGGGAATCA-GTTT  141

seq1  CTGCAGGGCATGGGATCATTCTGGACTTGGTTGTATAAAAGTCACCGAAA  199
      ||||||||||||||||||| || ||||||||||| |||||||||||||||
seq2  CTGCAGGGCATGGGATCATCCT-GACTTGGTTGTTTAAAAGTCACCGAAA  190

seq1  CCCACTGAATTGTAATGCCTTAAAGTCGTGAGCTGTGCCAGGGATGTAGC  249
      ||||||||| ||||||| ||||||||||||||||||||||||||||||||
seq2  CCCACTGAAATGTAATG-CTTAAAGTCGTGAGCTGTGCCAGGGATGTAGC  239

seq1  TTAAAGAAAGTGTGTTTGCCTAGCATGTGTGAAGCTCTGGGTTTGATCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAAAGTGTGTTTGCCTAGCATGTGTGAAGCTCTGGGTTTGATCTG  289

seq1  GTGTGTAGCATGGCTACACACACACACACACACAGAGGCAGGGGGGATGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTAGCATGGCTACACACACACACACACACAGAGGCAGGGGGGATGG  339

seq1  AGGGAGAATAAAAATGGTTTTATGGTGACTTCTACTCAATTAAAATAGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAATAAAAATGGTTTTATGGTGACTTCTACTCAATTAAAATAGAG  389

seq1  AAATTTTTAATCCAATCCTCTAGGGATTGAGTGGGCATTTGATACTTTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTAATCCAATCCTCTAGGGATTGAGTGGGCATTTGATACTTTTA  439

seq1  TTTCTTTCCCATAGAAAGTTGTCAAAGGACACACAGAAGAAGTGGAAATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCCCATAGAAAGTTGTCAAAGGACACACAGAAGAAGTGGAAATG  489

seq1  ATTTATTTCAGAGAGATACAAGACTAGTAAGATCAAGGGTAGATAATGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTCAGAGAGATACAAGACTAGTAAGATCAAGGGTAGATAATGTG  539

seq1  GCCATCACCCCTTAACAGAAGAAATGGTTACCTGGTTTAGCTATCCAACC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCACCCCTTAACAGAAGAAATGGTTACCTGGTTTAGCTATCCAACC  589

seq1  ACAAACATGAATAGGGGTGTCAGTACTTATGAATGACAATCACTACCATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACATGAATAGGGGTGTCAGTACTTATGAATGACAATCACTACCATT  639

seq1  CACTGGGGACTGGACCTCCTTTGATTTTGACACTTGTGAAACAGTGTTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGGACTGGACCTCCTTTGATTTTGACACTTGTGAAACAGTGTTGA  689

seq1  GCTGTGATGGCCAACTCAGGCACGGTTCCTTCAACTCACTTGCCAGATGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGATGGCCAACTCAGGCACGGTTCCTTCAACTCACTTGCCAGATGA  739

seq1  CCAAGAATCATATACTAATTTGGCTGCAACCAGGTCTTCCACTGCCATCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAATCATATACTAATTTGGCTGCAACCAGGTCTTCCACTGCCATCC  789

seq1  CTGGAATGGATAGAAATTTGCTTCACTTTTTTTGTCAGAACAACTTTGCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATGGATAGAAATTTGCTTCACTTTTTTTGTCAGAACAACTTTGCC  839

seq1  CTCAAATGACTCTGGCTATCTTCTGATGCCCTGTTTGCATGCTAAGGTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATGACTCTGGCTATCTTCTGATGCCCTGTTTGCATGCTAAGGTCC  889

seq1  ATAGTGATAACCATAAATGCTTGCCCAGACTCAGCATAGAAAGGGCTGGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGATAACCATAAATGCTTGCCCAGACTCAGCATAGAAAGGGCTGGT  939

seq1  CAACAAGAGGAGTATGTTACTAAGTAAGACATTTCCACATTTTCTAACCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGAGGAGTATGTTACTAAGTAAGACATTTCCACATTTTCTAACCT  989

seq1  CTAAGGTCGAGTTCAGAGGTCAGCAACATTTCACTTGAGGCTCAGTGAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGTCGAGTTCAGAGGTCAGCAACATTTCACTTGAGGCTCAGTGAAT  1039

seq1  AGTTTAAGCTCCATACATCATATTGTCTCTATCACATGGCCCAGTTCTGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAAGCTCCATACATCATATTGTCTCTATCACATGGCCCAGTTCTGC  1089

seq1  CTTTATAGTAGGAAAGTAGCTACAGTCACAGGGAAAGCAAATGAGACTGT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATAGTAGGAAAGTAGCTACAGTCACAGGGAAAGCAAATGAGACTGT  1139

seq1  ATTTTGGTAAGATCTTACTCATGAACACTACACATTGAATTC  1191
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGTAAGATCTTACTCATGAACACTACACATTGAATTC  1181

seq1: chr7_127201230_127202365
seq2: B6Ng01-168K18.g_68_1193

seq1  GAATTCAAATAAAGTGTGCAACATAATGTCTGGGGTCTATACCTGAGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATAAAGTGTGCAACATAATGTCTGGGGTCTATACCTGAGTGG  50

seq1  AGAGTGCCTAGGAGTGCTAGGAGTGGTTGGGGTTAGTGCTTACTCGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCCTAGGAGTGCTAGGAGTGGTTGGGGTTAGTGCTTACTCGAGGA  100

seq1  CAGCAGGGGAACAGAGAACACATGGGAGAGAAGGAATGGAGACCTCTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGGGAACAGAGAACACATGGGAGAGAAGGAATGGAGACCTCTGGA  150

seq1  GTGGTTTTCAGTTTTAATAATAGTTGACATCATTGAGTTGCTGGGGCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTTCAGTTTTAATAATAGTTGACATCATTGAGTTGCTGGGGCTCC  200

seq1  AACTTAGAGGCTCCTACATGCTAGGCAAGCACTCTATCACTGAGTTGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAGAGGCTCCTACATGCTAGGCAAGCACTCTATCACTGAGTTGCAG  250

seq1  TCTTGGCTCTAAGGGATGTTCTTTCCACATTAATGAAGACATTTTGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCTCTAAGGGATGTTCTTTCCACATTAATGAAGACATTTTGAATA  300

seq1  GTGCCATGCAAGGAAAAAAATCTGGCACTCTAAAAGGACACCTGTCCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCATGCAAGGAAAAAAATCTGGCACTCTAAAAGGACACCTGTCCACC  350

seq1  CAGCATTCTTAGTTTCCTACATAGGCCAAAGGTCTAGGCCATCCACATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTCTTAGTTTCCTACATAGGCCAAAGGTCTAGGCCATCCACATCC  400

seq1  ATGGGGTTAGAAGCTCAATGAGCATCCATAGAGCCAGATGCCCTTGGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTTAGAAGCTCAATGAGCATCCATAGAGCCAGATGCCCTTGGCAG  450

seq1  ATTTCCTTTAGGGCAGTGGCCCATGTAATGACCTCTCACCGCCTTCTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTTAGGGCAGTGGCCCATGTAATGACCTCTCACCGCCTTCTTGC  500

seq1  ACAGCATCCCAATCCTTGCTAGGGTCCTAAGTCTCCTGCTTTACTGTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATCCCAATCCTTGCTAGGGTCCTAAGTCTCCTGCTTTACTGTGAT  550

seq1  ATTGAAGACAGCTCCTCCCTGTAGACAGACCCTGAACTCATGCAGCAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGACAGCTCCTCCCTGTAGACAGACCCTGAACTCATGCAGCAAGA  600

seq1  CTCCTGTCTTCCAATAGAGATCATCATGCTTTCTTCCACAGGCTTAGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTCTTCCAATAGAGATCATCATGCTTTCTTCCACAGGCTTAGGGG  650

seq1  TCCATGCAACATATTGTGTGTGGAGAGATTGGCTCCTTCCAGGGACCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCAACATATTGTGTGTGGAGAGATTGGCTCCTTCCAGGGACCAGA  700

seq1  ACCTCAGTCTTATGCATATTTCTGAGAGGAGAATCAACCTGTGTCAAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGTCTTATGCATATTTCTGAGAGGAGAATCAACCTGTGTCAAGTT  750

seq1  GGCCGCATTGCCACTCCACATAGCAACACCCCAGTGGAGCAGATTTCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGCATTGCCACTCCACATAGCAACACCCCAGTGGAGCAGATTTCAAG  800

seq1  GCCACTTGAATGTGACAATCACTTTAGAAACACATCAAGCCTTCCTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTGAATGTGACAATCACTTTAGAAACACATCAAGCCTTCCTTTTT  850

seq1  GGGTTTGTGTTCACACCACACTTGTCACCCTCACACTTCATTACTTATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGTGTTCACACCACACTTGTCACCCTCACACTTCATTACTTATAA  900

seq1  AAATCCTAACTATTTTTAGGGGGAATATTTATTATTCTAATTTATAGGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTAACTATTTTTAGGGGGAATATTTATTATTCTAATTTATAGGCT  950

seq1  TAAAGAGCTTAAAGAGTGCAACTTCTTTGTGGGTTTTTTTTTTTTTGAGA  1000
      |||||||| ||||||||||||| ||||||||||  |||||||||||||||
seq2  TAAAGAGC-TAAAGAGTGCAAC-TCTTTGTGGG--TTTTTTTTTTTGAGA  996

seq1  CAAGGCCTTACTCTGTAGCCCAGGTTAACCTGGAATCTACTATGTAGCCT  1050
      | |||||||||||||||||||||  | |||||  ||||||||||||| ||
seq2  C-AGGCCTTACTCTGTAGCCCAG--TTACCTG--ATCTACTATGTAG-CT  1040

seq1  ATTT-GAGCTTCTCAAATACTGGGATTCT-AGGAATATGTTATTAATGCA  1098
      |||| |||||||||||||||| ||||||| |||||  |||||||||||||
seq2  ATTTGGAGCTTCTCAAATACT-GGATTCTAAGGAAATTGTTATTAATGCA  1089

seq1  TCCAGTGTGCCAAACTCTTTCTGAACCTAGCCTGCTTA  1136
        ||||||| ||||  ||||||| | ||||||||||||
seq2  CTCAGTGTG-CAAATCCTTTCTGGAACTAGCCTGCTTA  1126