BAC Information

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BAC

Clone NameB6Ng01-168M03
Chromosome7 (Build37)
Map Location 143,905,611 - 144,017,666
singlet/doubletdoublet
Overlap geneEG668771
Upstream geneMki67, LOC668764, LOC546009, EG621677
Downstream geneMgmt, EG621804, Ebf3, 9430038I01Rik, Txnl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168M03.bB6Ng01-168M03.g
ACCDH959913DH959914
length1,098928
definitionDH959913|Mus musculus domesticus DNA, BAC clone: B6Ng01-168M03, 5' end.DH959914|Mus musculus domesticus DNA, BAC clone: B6Ng01-168M03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(143,905,611 - 143,906,706)(144,016,732 - 144,017,666)
sequence
gaattcaccctgccatgggagggcacaatgttgtctctttcccaaacttg
ggacctgtttgttcctttttagagttgttttttacttaggctttttattt
tcttctgtgattttgagacaaggtcttatgcagcctcgactggtctccaa
ctcactatgtagccaagggtgacttaaacaactagcccattattctgttt
attagccaggcagtggtgacgcacacctttaatcccagcacttgggaagc
agaggcaggcagatttctgagttcaaggccagcctgatctacagagtgag
ttccaggacagccagggctacacagagaaaccctgtctcaaaaaacataa
caaaacaacaaaaaacgtgcatagttttttgggggtttttttgttttttt
ttttttttagaaaatatttaaatgggaagaaaagcaatagaaacctacct
ccattctccttcttgaccctaagaagctctgatttttctccattgcccac
actttccctcagctttacgctggatctcaccctttctagccagcatcaca
gcccctgtgtgaagtatgatcctccagtgcacagggagtactccttatgg
gacttgtctttgcatctttctctgacaagaacaggtaccaggcgtagtag
tgttcagatatggacaacatcccattactcttcttggattgtctgacact
gtgggtggagacctacagacatatttctaggttctgctagttcatctgga
aggacaactttgaccttcataggataactttgcaacggtattttccccct
aactcccttgaaggatgtctacagtatgtttctgtgggaccccttgtgtg
cagcttgtcactgcagtaccaccccctccctgcccttgtggtacccctcc
cctgaaggatgcctgcagtgtgttactgcacacccctcggtcgtattttg
tcctcttatgtctgtattagaacatcttgccttttgcctggagggcctcc
ccacggttggatgggatccactctaaatcttggaaggcgggagcttcgtc
tctctatacctattttccctctcaactgagataagttgactataggaa
gaattcactggtgctctttgtttgattgtcgacctgacatgtcagatgag
aagggccccttggataacctgccaaaacaacagcacaaataaacgccaga
cgacaccgcggctgcttgatgtcgaattacaaacaccgggcccatcatgg
attcaaatggagcggctatgtaaaagcccagtggcgcccgtggggtgggg
ctagtgggaacagagtgcctctgggtaccaggctgctcgggtttttcttt
ttctttttccttgggtgagatgggagcctgggttccgcaaaccggacggc
aatatttagcattcattggtttccttataaaatttgtctgatcgtctgat
gtgacaggctctgacgctggagaaactgcttttcaaattgcctcctgtag
ctctgctggattccagcggttctgggcaggaaaactgtctgaagcacgca
tccttccctgtatctttcttcgaatattcccttggcattgagaccaagcc
ccaccgcttacaagatagcaactgtgggaagggggtggtatttatctcct
gcgttgtttttaggtccaaaggcagacttgtggggctgctcattacactt
ctgccttgtgataaaaatctctacaaccagtgactagcttcctcggctgg
agttcatttcatctcacaagctactcagactgcaccccctagcccccccc
caaaaaccctactcaaacacgttatttctttaaatacagaaaaatagttt
tctaggatccttttgaaaaattttgccaacctgtagttttaagtacccac
ttcataatgggtaagcgaattaattttttttaatttaatttttttttact
gttttgcacatatgtgcaagtatgactggattgaactgtttgtccttgag
ctgtacattgtgcgaccaggtcgtatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_143905611_143906706
seq2: B6Ng01-168M03.b_47_1144

seq1  GAATTCACCCTGCCATGGGAGGGCACAATGTTGTCTCTTTCCCAAACTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCTGCCATGGGAGGGCACAATGTTGTCTCTTTCCCAAACTTG  50

seq1  GGACCTGTTTGTTCCTTTTTAGAGTTGTTTTTTACTTAGGCTTTTTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGTTTGTTCCTTTTTAGAGTTGTTTTTTACTTAGGCTTTTTATTT  100

seq1  TCTTCTGTGATTTTGAGACAAGGTCTTATGCAGCCTCGACTGGTCTCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGTGATTTTGAGACAAGGTCTTATGCAGCCTCGACTGGTCTCCAA  150

seq1  CTCACTATGTAGCCAAGGGTGACTTAAACAACTAGCCCATTATTCTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTATGTAGCCAAGGGTGACTTAAACAACTAGCCCATTATTCTGTTT  200

seq1  ATTAGCCAGGCAGTGGTGACGCACACCTTTAATCCCAGCACTTGGGAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCCAGGCAGTGGTGACGCACACCTTTAATCCCAGCACTTGGGAAGC  250

seq1  AGAGGCAGGCAGATTTCTGAGTTCAAGGCCAGCCTGATCTACAGAGTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGGCAGATTTCTGAGTTCAAGGCCAGCCTGATCTACAGAGTGAG  300

seq1  TTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAACATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAACATAA  350

seq1  CAAAACAACAAAAAACGTGCATAGTTTTTTGGGGGTTTTTTTGTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAACAAAAAACGTGCATAGTTTTTTGGGGGTTTTTTTGTTTTTTT  400

seq1  TTTTTTTTAGAAAATATTTAAATGGGAAGAAAAGCAATAGAAACCTACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAGAAAATATTTAAATGGGAAGAAAAGCAATAGAAACCTACCT  450

seq1  CCATTCTCCTTCTTGACCCTAAGAAGCTCTGATTTTTCTCCATTGCCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTCCTTCTTGACCCTAAGAAGCTCTGATTTTTCTCCATTGCCCAC  500

seq1  ACTTTCCCTCAGCTTTACGCTGGATCTCACCCTTTCTAGCCAGCATCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCCTCAGCTTTACGCTGGATCTCACCCTTTCTAGCCAGCATCACA  550

seq1  GCCCCTGTGTGAAGTATGATCCTCCAGTGCACAGGGAGTACTCCTTATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGTGTGAAGTATGATCCTCCAGTGCACAGGGAGTACTCCTTATGG  600

seq1  GACTTGTCTTTGCATCTTTCTCTGACAAGAACAGGTACCAGGCGTAGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGTCTTTGCATCTTTCTCTGACAAGAACAGGTACCAGGCGTAGTAG  650

seq1  TGTTCAGATATGGACAACATCCCATTACTCTTCTTGGATTGTCTGACACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGATATGGACAACATCCCATTACTCTTCTTGGATTGTCTGACACT  700

seq1  GTGGGTGGAGACCTACAGACATATTTCTAGGTTCTGCTAGTTCATCTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGGAGACCTACAGACATATTTCTAGGTTCTGCTAGTTCATCTGGA  750

seq1  AGGACAACTTTGACCTTCATAGGATAACTTTGCAACGGTATTTTCCCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAACTTTGACCTTCATAGGATAACTTTGCAACGGTATTTTCCCCCT  800

seq1  AACTCCCTTGAAGGATGTCTACAGTATGTTTCTGTGGTACCCCTTGTGTG  850
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AACTCCCTTGAAGGATGTCTACAGTATGTTTCTGTGGGACCCCTTGTGTG  850

seq1  CAGCTTGTCACTGCAGTACCACCCCCTCCCTGCCC-TGTGGATACCCCTC  899
      ||||||||||||||||||||||||||||||||||| ||||| ||||||||
seq2  CAGCTTGTCACTGCAGTACCACCCCCTCCCTGCCCTTGTGG-TACCCCTC  899

seq1  CCCTGAAGGATGCCTGCAGTGTGTTACTGCAGCACCCCTCGTTCGTA-TT  948
      ||||||||||||||||||||||||||||||| ||||||||| ||||| ||
seq2  CCCTGAAGGATGCCTGCAGTGTGTTACTGCA-CACCCCTCGGTCGTATTT  948

seq1  TGTCCTCTTATGTCTGTATTAGAACATC-TGGCTTTTGC--TGAGGGCCT  995
      |||||||||||||||||||||||||||| || |||||||   ||||||||
seq2  TGTCCTCTTATGTCTGTATTAGAACATCTTGCCTTTTGCCTGGAGGGCCT  998

seq1  CCCCACGGTTGGATGGGATCCACTCTAAAACCTGG-AGGC-GGAGCTTCG  1043
      ||||||||||||||||||||||||||||| | ||| |||| |||||||||
seq2  CCCCACGGTTGGATGGGATCCACTCTAAATCTTGGAAGGCGGGAGCTTCG  1048

seq1  TCTTCTCTAATTACCTATTTTCCCTC-AAACAGAGATAAAGTTGACTATA  1092
      || ||||||  |||||||||||||||  ||| ||||| ||||||||||||
seq2  TC-TCTCTA--TACCTATTTTCCCTCTCAACTGAGAT-AAGTTGACTATA  1094

seq1  GGAA  1096
      ||||
seq2  GGAA  1098

seq1: chr7_144016732_144017666
seq2: B6Ng01-168M03.g_69_996 (reverse)

seq1  GGATACCACCCTGGTTGCACAAATGTACAGGCTCAAGGACAAATCTGTTC  50
      |||||| | |||||| |||| |||||||| ||||||||||||| | ||||
seq2  GGATACGA-CCTGGTCGCAC-AATGTACA-GCTCAAGGACAAA-CAGTTC  46

seq1  AATCCATTTCATACCTGCACATCTGTGCAAAACAGTAAAAAAAAATTAAA  100
      ||||||  |||||| ||||||| |||||||||||||||||||||||| ||
seq2  AATCCA-GTCATACTTGCACATATGTGCAAAACAGTAAAAAAAAATT-AA  94

seq1  ATTAAAAAAAATTAATTTGCTTACCCATTCTGAAGTGGGTACTTAAAACT  150
      ||||||||||||||||| ||||||||||| ||||||||||||||||||||
seq2  ATTAAAAAAAATTAATTCGCTTACCCATTATGAAGTGGGTACTTAAAACT  144

seq1  ACAGGTTGGCAAAATTTTTCAAAAGGATCCTAGAAAACTATTTTTCTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTGGCAAAATTTTTCAAAAGGATCCTAGAAAACTATTTTTCTGTA  194

seq1  TTTAAAGAAATAACGTGTTTGAGTAGGGTTTTTTGGGGGGGGGCTAGGGG  250
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTAAAGAAATAACGTGTTTGAGTAGGG-TTTTTGGGGGGGGGCTAGGGG  243

seq1  GTGCAGTCTGAGTAGCTTGTGAGATGAAATGAACTCCAGCCGAGGAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTCTGAGTAGCTTGTGAGATGAAATGAACTCCAGCCGAGGAAGCT  293

seq1  AGTCACTGGTTGTAGAGATTTTTATCACAAGGCAGAAGTGTAATGAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTGGTTGTAGAGATTTTTATCACAAGGCAGAAGTGTAATGAGCAG  343

seq1  CCCCACAAGTCTGCCTTTGGACCTAAAAACAACGCAGGAGATAAATACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACAAGTCTGCCTTTGGACCTAAAAACAACGCAGGAGATAAATACCA  393

seq1  CCCCCTTCCCACAGTTGCTATCTTGTAAGCGGTGGGGCTTGGTCTCAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTCCCACAGTTGCTATCTTGTAAGCGGTGGGGCTTGGTCTCAATG  443

seq1  CCAAGGGAATATTCGAAGAAAGATACAGGGAAGGATGCGTGCCTCAGACA  500
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCAAGGGAATATTCGAAGAAAGATACAGGGAAGGATGCGTGCTTCAGACA  493

seq1  GTTTTCCTGCCCAGAACCGCTGGAATCCAGCAGAGCTACAGGAGGCAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCTGCCCAGAACCGCTGGAATCCAGCAGAGCTACAGGAGGCAATT  543

seq1  TGAAAAGCAGTTTCTCCAGCGTCAGAGCCTGTCACATCAGACGATCAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGCAGTTTCTCCAGCGTCAGAGCCTGTCACATCAGACGATCAGAC  593

seq1  AAATTTTATAAGGAAACCAATGAATGCTAAATATTGCCGTCCGGTTTGCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTATAAGGAAACCAATGAATGCTAAATATTGCCGTCCGGTTTGCG  643

seq1  GAACCCAGGCTCCCATCTCACCCAAGGAAAAAGAAAAAGAAAAACCCGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAGGCTCCCATCTCACCCAAGGAAAAAGAAAAAGAAAAACCCGAG  693

seq1  CAGCCTGGTACCCAGAGGCACTCTGTTCCCACTAGCCCCACCCCACGGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGTACCCAGAGGCACTCTGTTCCCACTAGCCCCACCCCACGGGC  743

seq1  GCCACTGGGCTTTTACATAGCCGCTCCATTTGAATCCATGATGGGCCCGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGGGCTTTTACATAGCCGCTCCATTTGAATCCATGATGGGCCCGG  793

seq1  TGTTTGTAATTCGACATCAAGCAGCCGCGGTGTCGTCTGGCGTTTATTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTAATTCGACATCAAGCAGCCGCGGTGTCGTCTGGCGTTTATTTG  843

seq1  TGCTGTTGTTTTGGCAGGTTATCCAAGGGGCCCTTCTCATCTGACATGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTGTTTTGGCAGGTTATCCAAGGGGCCCTTCTCATCTGACATGTC  893

seq1  AGGTCGACAATCAAACAAAGAGCACCAGTGAATTC  935
      |||||||||||||||||||||||||||||||||||
seq2  AGGTCGACAATCAAACAAAGAGCACCAGTGAATTC  928