BAC Information

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BAC

Clone NameB6Ng01-169K04
Chromosome7 (Build37)
Map Location 85,225,853 - 85,227,116
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneA330068G13Rik, Ntrk3, Mrpl46, Mrps11, Det1, Isg20l1, Isg20, Acan
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169K04.bB6Ng01-169K04.g
ACCDH960560DH960561
length1,1491,229
definitionDH960560|Mus musculus domesticus DNA, BAC clone: B6Ng01-169K04, 5' end.DH960561|Mus musculus domesticus DNA, BAC clone: B6Ng01-169K04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccttgagat
tccacctcacaccagtcagaatggctaagatcaaaatttcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatcccgcaatacctctcctgggt
atatatccagaagatgttccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacggaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgaatgaggtaacccaattacaaa
agaactcaaatgatatgtactcactgataagtggatactagcccagaaac
ttagaatacccaagatataagatacaatttgctaaacacatgaaactcaa
gaagaacaaagaccaaagtgtagacactttgccccttcttagaattggga
acaaaacacccattgaaggagttacaaagtttggagctgtgacaaaagga
tggacatctagagactgccatatcccgggatccatcccataatcagcctc
caaacactgacaccattgcatacacaagcaagagtgtgctgataggaccc
agatatagctgtctcttgtgagactatgccggggcctagcaaacacagaa
gtggatgctcacagtcagctattggatggatcacaggccccatggaggag
ctagagaaagtacccagagtaaaaggatctgcaccctatagtggaacaca
tatgactaccagtactcccagcgctcatgtctttagttgcatatgtatca
gagatgctagtcagcatcattgaagagaggccatagtcttgcaaacttta
tctttctcagtacaggacgccagtgcagaatgaattgatgtgttggtga
gaattctttcccaggaagcattcatccattttcctccctggaattgaagg
aaggctggagcagttactggctggctcgggagatggacatggactagatg
gagtgagaataacttgggcaaccaaacacagatggaaccagactaaggct
gaaggcagagtcatactatggagaccaggtaagtcagtgaagtatgtctg
ctgttggacccgagccagacaaagttcaaagacacagtaaggcaggaagt
atggtaacggtgagtcacagcaacccagacttctcatgagtctggggcca
caggttcttgattacctgttgctgactttagggatccaaggtcagattgg
acagtgatttgagggacacttcttagttcctggcgatactgatgagggtg
tttttacttataacaaagcccggtgaagatattctccatcttttagacca
ctctgtggaccattgtgctagctgaccagatgacaaagtctttggctcat
tatactttagatgattgtttacctagctgcctagcattaaatgatgggag
aaaaatcgaaagaaacaagaaactagaactagcccctaacccattttact
caagtctatgaagcatggcattttgattctgtgactgaggcctagttatc
caccttaaatttaaagggcaacaacaggttgtcttataataataacaaaa
caatgctgttttcctgacagttgagagaaaagtaggaggaagaccacaaa
gcatcccagggacaaagtgaagatatatatttagaattcaaaggccaggc
tatgttgactttactctgtgacatcacatcgagtttgccaatgtcaagga
tgctaatgtttgcttcagtttcactgagttactgccctgcattcctccaa
gtaacttgcacatgggaagtttcaatgctcatgaaatctcttcagtacag
ggaaattgaggtataggagatcaggatttgttgagatacatacctgtaag
cagagatggacttgggctctgtctaaaactcatatttatctattatctag
ttttaatttatggacttatggaaacaagttttctagtttccgggtctgaa
ctcccaccatctgttctctttttcctggagagcagtatgaatttaacatt
cccaataaggatacgtacactcattcaatggagaataggaccttggaaga
tgaatgtatagctacctaaagtggtgtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_85225853_85227116
seq2: B6Ng01-169K04.g_66_1294 (reverse)

seq1  TAACACCACTTTAGGTAACTAT-CA-TCATCACTCCACAGAGACTTCATT  48
      ||||||||||||||||| |||| || |||||  ||||  |    | |  |
seq2  TAACACCACTTTAGGTAGCTATACATTCATC-TTCCAAGG----TCCTAT  45

seq1  TCTGCATTTATAAATGAAGATGGTAATGTTATCTTTATTGTGAAATGTTT  98
      ||| |||   | |||||     ||     |||| |||||| | |||| ||
seq2  TCTCCAT---TGAATGA-----GTGTACGTATCCTTATTG-GGAATG-TT  85

seq1  AAATTTAATAACTGAATTTCT-CAGGGAAAAGAGACAGGATGGTTGGGAG  147
      ||||| |   ||||    ||| |||| ||||||||   ||||| ||||||
seq2  AAATTCA--TACTG---CTCTCCAGGAAAAAGAGAACAGATGG-TGGGAG  129

seq1  TTCAGGACCAGATACCTATGAAGACTTTGTTTCCAATAAGTCAATAGATT  197
      |||| |||| |  | ||| ||| || |||||||| ||||||| ||| |||
seq2  TTCA-GACCCGGAAACTA-GAAAAC-TTGTTTCC-ATAAGTCCATAAATT  175

seq1  TAAAAACTAGATAAATAGATAAATAATGAGTTTTAGGACAGAGCCCAAGT  247
        |||||||||| ||||||||||| |||||||||| ||||||||||||||
seq2  --AAAACTAGAT-AATAGATAAAT-ATGAGTTTTA-GACAGAGCCCAAGT  220

seq1  CCATCTCTGCTTACCAGGTATGTAATCTTCAACAAATTCCTTGATCTCCT  297
      ||||||||||||| ||||||||| ||| |||||||||  | |||||||| 
seq2  CCATCTCTGCTTA-CAGGTATGT-ATC-TCAACAAAT--CCTGATCTCC-  264

seq1  TATACCTCAATTTCCCTGTACCTGAAGAGATTTCATGAGCATTGAAAACT  347
      |||||||||||||||||||| ||||||||||||||||||||||| |||||
seq2  TATACCTCAATTTCCCTGTA-CTGAAGAGATTTCATGAGCATTG-AAACT  312

seq1  TCCCATGTGCAAGTTACTTGGAGGAATGCAGGGCAGTAACTCAGTGAAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGTGCAAGTTACTTGGAGGAATGCAGGGCAGTAACTCAGTGAAAC  362

seq1  TGAAGCAAACATTAGCATCCTTGACATTGGCAAACTCGATGTGATGTCAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAAACATTAGCATCCTTGACATTGGCAAACTCGATGTGATGTCAC  412

seq1  AGAGTAAAGTCAACATAGCCTGGCCTTTGAATTCTAAATATATATCTTCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAAGTCAACATAGCCTGGCCTTTGAATTCTAAATATATATCTTCA  462

seq1  CTTTGTCCCTGGGATGCTTTGTGGTCTTCCTCCTACTTTTCTCTCAACTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCCCTGGGATGCTTTGTGGTCTTCCTCCTACTTTTCTCTCAACTG  512

seq1  TCAGGAAAACAGCATTGTTTTGTTATTATTATAAGACAACCTGTTGTTGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAAACAGCATTGTTTTGTTATTATTATAAGACAACCTGTTGTTGC  562

seq1  CCTTTAAATTTAAGGTGGATAACTAGGCCTCAGTCACAGAATCAAAATGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAATTTAAGGTGGATAACTAGGCCTCAGTCACAGAATCAAAATGC  612

seq1  CATGCTTCATAGACTTGAGTAAAATGGGTTAGGGGCTAGTTCTAGTTTCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTCATAGACTTGAGTAAAATGGGTTAGGGGCTAGTTCTAGTTTCT  662

seq1  TGTTTCTTTCGATTTTTCTCCCATCATTTAATGCTAGGCAGCTAGGTAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTTTCGATTTTTCTCCCATCATTTAATGCTAGGCAGCTAGGTAAA  712

seq1  CAATCATCTAAAGTATAATGAGCCAAAGACTTTGTCATCTGGTCAGCTAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATCTAAAGTATAATGAGCCAAAGACTTTGTCATCTGGTCAGCTAG  762

seq1  CACAATGGTCCACAGAGTGGTCTAAAAGATGGAGAATATCTTCACCGGGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGGTCCACAGAGTGGTCTAAAAGATGGAGAATATCTTCACCGGGC  812

seq1  TTTGTTATAAGTAAAAACACCCTCATCAGTATCGCCAGGAACTAAGAAGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTATAAGTAAAAACACCCTCATCAGTATCGCCAGGAACTAAGAAGT  862

seq1  GTCCCTCAAATCACTGTCCAATCTGACCTTGGATCCCTAAAGTCAGCAAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTCAAATCACTGTCCAATCTGACCTTGGATCCCTAAAGTCAGCAAC  912

seq1  AGGTAATCAAGAACCTGTGGCCCCAGACTCATGAGAAGTCTGGGTTGCTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATCAAGAACCTGTGGCCCCAGACTCATGAGAAGTCTGGGTTGCTG  962

seq1  TGACTCACCGTTACCATACTTCCTGCCTTACTGTGTCTTTGAACTTTGTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCACCGTTACCATACTTCCTGCCTTACTGTGTCTTTGAACTTTGTC  1012

seq1  TGGCTCGGGTCCAACAGCAGACATACTTCACTGACTTACCTGGTCTCCAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCGGGTCCAACAGCAGACATACTTCACTGACTTACCTGGTCTCCAT  1062

seq1  AGTATGACTCTGCCTTCAGCCTTAGTCTGGTTCCATCTGTGTTTGGTTGC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGACTCTGCCTTCAGCCTTAGTCTGGTTCCATCTGTGTTTGGTTGC  1112

seq1  CCAAGTTATTCTCACTCCATCTAGTCCATGTCCATCTCCCGAGCCAGCCA  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTATTCTCACTCCATCTAGTCCATGTCCATCTCCCGAGCCAGCCA  1162

seq1  GTAACTGCTCCAGCCTTCCTTCAATTCCAGGGAGGAAAATGGATGAATGC  1247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTGCTCCAGCCTTCCTTCAATTCCAGGGAGGAAAATGGATGAATGC  1212

seq1  TTCCTGGGAAAGAATTC  1264
      |||||||||||||||||
seq2  TTCCTGGGAAAGAATTC  1229