BAC Information

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BAC

Clone NameB6Ng01-170A21
Chromosome7 (Build37)
Map Location 147,607,532 - 147,608,679
singlet/doubletsinglet
Overlap genenone
Upstream geneInpp5a, Nkx6-2, E030019B06Rik, 9330101J02Rik, LOC100043472, EG434253, EG664869, Gpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik, 5830411N06Rik, EG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60, GA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531, Olfr532
Downstream geneOlfr533, Olfr534-ps1, Olfr535, Olfr536, Olfr537-ps1, Olfr1523-ps1, Olfr538, Olfr1553-ps1, Olfr46, Olfr61, Olfr53, Olfr539, GA_x5J8B7W3EKE-4574231-4574913, Olfr45, Olfr541, GA_x5J8B7W3EKE-4522784-4521912, Cyp2e1, Syce1, LOC100043529, BC066028, 1190003J15Rik, Scgb1c1, Odf3, Bet1l, Ric8, Sirt3, Psmd13, LOC100043546, Cox8b, Nlrp6, Athl1, Ifitm5, Ifitm2, Ifitm1, LOC665143, Ifitm3, Ifitm6, B4galnt4, Pkp3, Sigirr, Trp53i5, Ptdss2, Rnh1, LOC546015, Hras1, Lrrc56, 1600016N20Rik, Rassf7, AA673488, Irf7, Mucdhl, Sct, Drd4, Deaf1, Tmem80, Eps8l2, B230206H07Rik, Taldo1, LOC100043585, Pddc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170A21.bB6Ng01-170A21.g
ACCDH960866DH960867
length1,1471,159
definitionDH960866|Mus musculus domesticus DNA, BAC clone: B6Ng01-170A21, 5' end.DH960867|Mus musculus domesticus DNA, BAC clone: B6Ng01-170A21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatacattatgtccacaaagagccctgaagtctcatttttgtact
tttgtcctaatgtagactagccactggggtggactctgggatttcttggg
agtggccctcagagagcaattaccaacagtgaggtaaacaggagtctcta
taggccacagttgccaagccataagtcatggagaaagctgatgcctgaga
tcatgtgcacaactcttggacactgaccccttggtgatttctaccccagg
gatgccaccaaaacatcttgcctaagcatcatgtacccttgatcactgta
gaaagatgtatttcttgttaacaaactgtccctcatcccattgtttatgg
ttacaggagctccacttgttgatgtcctggagctacctaggggctggtac
acatgggactgtttaatgccaggtttcaatcccatttttttccctttgta
atggtgctgtctattccagcagtttggacataaagaactcctgggaccat
atttagttatgatcttggaagacaaatatgttaatagcttcacacaccta
taaaaatccaaggttacatgggctaggcttactgtgtgccactccaatag
cttgccaacctgaatgcctttcattcggttggttggttgtcctacatgga
acaaatcctgggcttctttccagtgatggccaactaggccatcttttgat
acatatgctgctagagtcaagagctccggggtactggttagttcataatg
ttgttccaactatagggttgcagattcctttagctccttgggtactttct
ctagctcctccattgggggccctgtgatctatccaatagctgactgtgag
catccacttctgtgcatgctaggccccggcatagtctcacaagacacagc
gatatctgggtcctttcagcaaaatcttgctagtgtatgcaatgctgtca
gtgtttggatgctgattatgggggtggatcccctggatattgaatctcct
tgaatggccatccttttgtacagctccacacttgtctctgtaactccctt
ccacggggggtttttttcccattctaagaagaggcgcagggtcacatttt
ggcttcttcttctctggggttcatgcatagcaaatgtatactatatc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcccccattgttggtg
ggattgcaggcttgtacagccactttggaaatcagtcttgcggttcctca
taaaattggacacagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcaaccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtgatacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggtgggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggactatgtagagactgccatatccagagatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattaaaa
ggacccagatgtagctgtctcttgtgagactatgccgggcctagcaaaca
cagaagtcgatgctcacagtcagctaatggatggatccacagggctcccc
atggaggagctatgaaaaagtagccaaggagcttaaaggatctgcaaccc
tataggtggaacaacatatgaactaacacgtacccggagcccttgatctt
actttctttgattcaaaatggcctctgggcatcctgcaagagaagccatg
gattgcaacctatatatgctccgtcacgggaacgccagggctaaagggga
gtgggtggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_147607532_147608679
seq2: B6Ng01-170A21.b_42_1188

seq1  GAATTCATACATTATGTCCACAAAGAGCCCTG-TGTCTCATTTTTGTACT  49
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  GAATTCATACATTATGTCCACAAAGAGCCCTGAAGTCTCATTTTTGTACT  50

seq1  TTTGTCCTAATGTAGACTAGCCACTGGGGTGGACTCTGGGATTTCTTGGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCTAATGTAGACTAGCCACTGGGGTGGACTCTGGGATTTCTTGGG  100

seq1  AGTGGCCCTCAGAGAGCAATTACCAACAGTGAGGTAAACAGGAGTCTCTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCCCTCAGAGAGCAATTACCAACAGTGAGGTAAACAGGAGTCTCTA  150

seq1  TAGGCCACAGTTGCCAAGCCATAAGTCATGGAGAAAGCTGATGCCTGAGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCACAGTTGCCAAGCCATAAGTCATGGAGAAAGCTGATGCCTGAGA  200

seq1  TCATGTGCACAACTCTTGGACACTGACCCCTTGGTGATTTCTACCCCAGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGCACAACTCTTGGACACTGACCCCTTGGTGATTTCTACCCCAGG  250

seq1  GATGCCACCAAAACATCTTGCCTAAGCATCATGTACCCTTGATCACTGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCACCAAAACATCTTGCCTAAGCATCATGTACCCTTGATCACTGTA  300

seq1  GAAAGATGTATTTCTTGTTAACAAACTGTCCCTCATCCCATTGTTTATGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATGTATTTCTTGTTAACAAACTGTCCCTCATCCCATTGTTTATGG  350

seq1  TTACAGGAGCTCCACTTGTTGATGTCCTGGAGCTACCTAGGGGCTGGTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGAGCTCCACTTGTTGATGTCCTGGAGCTACCTAGGGGCTGGTAC  400

seq1  ACATGGGACTGTTTAATGCCAGGTTTCAATCCCATTTTTTTCCCTTTGTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGACTGTTTAATGCCAGGTTTCAATCCCATTTTTTTCCCTTTGTA  450

seq1  ATGGTGCTGTCTATTCCAGCAGTTTGGACATAAAGAACTCCTGGGACCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCTGTCTATTCCAGCAGTTTGGACATAAAGAACTCCTGGGACCAT  500

seq1  ATTTAGTTATGATCTTGGAAGACAAATATGTTAATAGCTTCACACACCTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTTATGATCTTGGAAGACAAATATGTTAATAGCTTCACACACCTA  550

seq1  TAAAAATCCAAGGTTACATGGGCTAGGCTTACTGTGTGCCACTCCAATAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATCCAAGGTTACATGGGCTAGGCTTACTGTGTGCCACTCCAATAG  600

seq1  CTTGCCAACCTGAATGCCTTTCATTCGGTTGGTTGGTTGTCCTACATGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCAACCTGAATGCCTTTCATTCGGTTGGTTGGTTGTCCTACATGGA  650

seq1  ACAAATCCTGGGCTTCTTTCCAGTGATGGCCAACTAGGCCATCTTTTGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCCTGGGCTTCTTTCCAGTGATGGCCAACTAGGCCATCTTTTGAT  700

seq1  ACATATGCTGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGCTGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATG  750

seq1  TTGTTCCAACTATAGGGTTGCAGATTCCTTTAGCTCCTTGGGTACTTTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCAACTATAGGGTTGCAGATTCCTTTAGCTCCTTGGGTACTTTCT  800

seq1  CTAGCTCCTCCATTGGGGGCCCTGTGATCTATCCAATAGCTGACTGTGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCCTCCATTGGGGGCCCTGTGATCTATCCAATAGCTGACTGTGAG  850

seq1  CATCCACTTCTGTGCATGCTAGGCCCCGGCATAGTCTCACAAGAGACAGC  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CATCCACTTCTGTGCATGCTAGGCCCCGGCATAGTCTCACAAGACACAGC  900

seq1  TATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGCTGTCA  949
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGCTGTCA  950

seq1  GTGTTTGGATGCTGATTAT-GGGGTGGAT-CCCTGGATATTGAGTCT-CT  996
      ||||||||||||||||||| ||||||||| ||||||||||||| ||| ||
seq2  GTGTTTGGATGCTGATTATGGGGGTGGATCCCCTGGATATTGAATCTCCT  1000

seq1  AGATGGTCCATCCTTTTGTACAGCTCCAAACTTTGTCTCTGTAACT-CCT  1045
       ||  | ||||||||||||||||||||| || |||||||||||||| |||
seq2  TGAATGGCCATCCTTTTGTACAGCTCCACAC-TTGTCTCTGTAACTCCCT  1049

seq1  TCCATGGGTGTTTTTTTCCCAATTCTAAGAAGGGGCACAGTGTCCACATT  1095
      |||| ||| | |||||| || ||||||||||| ||| ||| || ||||||
seq2  TCCACGGGGGGTTTTTTTCCCATTCTAAGAAGAGGCGCAGGGT-CACATT  1098

seq1  TTGGTCTTCTTTCTTCT-TGAGTTTCATGCATTTAGCAAATTGTATCTTA  1144
      |||| |||| ||||||| || | ||||||||  ||||||| |||||  ||
seq2  TTGG-CTTC-TTCTTCTCTGGGGTTCATGCA--TAGCAAA-TGTATACTA  1143

seq1  TATC  1148
      ||||
seq2  TATC  1147