BAC Information

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BAC

Clone NameB6Ng01-170H14
Chromosome7 (Build37)
Map Location 100,759,111 - 100,967,435
singlet/doubletdoublet
Overlap geneEG638305
Upstream geneAnkrd42, Pcf11, LOC676240, LOC100040007, 4632427E13Rik, Rab30, 4632434I11Rik, Prcp, A830059I20Rik, LOC100040298, LOC666783
Downstream geneEG545982, EG666816
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170H14.bB6Ng01-170H14.g
ACCDH961177DH961178
length4291,139
definitionDH961177|Mus musculus domesticus DNA, BAC clone: B6Ng01-170H14, 5' end.DH961178|Mus musculus domesticus DNA, BAC clone: B6Ng01-170H14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,759,111 - 100,759,545)(100,966,297 - 100,967,435)
sequence
tgtgctgactgctgtcaatactgctgaacccctgtgaagaacatcaacgt
cacaattgcacaaccagacaaagaaattttctggtgacaatcttttgtct
ccccatctcaccagtggatcagatcattgcttactgtttgtttgtttgtt
tatttatttatttatttatttatttatttatttattatttttaaaaatta
ggtattttcttcatttacttttccaatgctatcccaaaagtcccccatac
ccttcccccactcccctacccactcactcccacttcttggccctggggtt
cccctgtactaaggcatataaagtttgcaagaccaatgggcctctctttc
cactgatggctgactaggccatcttctgatacatatgcagctagagacac
aagctccggggtggtggtggtggtggtgg
gaattccatataaattgagatagtattaatgttctatgtaaaaaaaagag
gaacaaggaagttggatattgaggagagagatgggtatgggactttaata
gactctactatagttccagtttccatataagctgaaaatcacattccact
acgccactcccttttctctcccccctacattctgacaatacttagctgat
gaaggtccttaaccagatccaatatccatatttgtatcaggctcgtagtc
ctgtcagatattcattattggaacagagattttcatgtacattatttttg
gatatgtaagttctgacaaatgtcctcatgatgatatggcacaggtttca
tttatctaatatgcacaggaaccaacatccattcctcctgtgacaactga
gatcaatcatcaccaaccaaatctaaatctataaaaatggaaaccaaggg
cagtgattaggaagcagactggcaggcaagcaagggatcaggaagtgtgg
gaactctaggcaagaccaagttgtgagcaacatggagggcagagagcagc
tactgcagtgggggcaactggcgctggcagaggtgaacaaacaagcaaac
atcaccaagaccagtaaggcaacatggcctccgccatgaaggctgtaaca
gagctgaacgaaccgcttatgaagatcaaaatctcctttctgtgatctgc
aagaatgtaattgctgccaggcaatcttcttggaaggtcatctgtagcat
tgggcaaaaatccatggcagatggcaatgtaagcagttagaaaaagttaa
aagaagttcgaaaaatgagggctttccaaggagaagaccagagggaactg
gaaacagttcccatgatgtcttcgctctgcttgacagctcttcatcagaa
ctgcaatcattttcagtatgagatcaaggtgccctatctgaataatgaaa
ggtgattactatggctacttggcagagtgggcttcttggggagaaaaaaa
tactgtgctgaagctcatgcacaataaagtctttcagaattcagcaaaga
agaaatgcatccacatgcctcatcgggcttgttctggccctcaattttct
gccttctactataggtacagaatgaactatgataggcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_100759111_100759545
seq2: B6Ng01-170H14.b_47_481

seq1  GAATTCTGTGCTGACTGCTGTCAATACTGCTGAACCCCTGTGAAGAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGCTGACTGCTGTCAATACTGCTGAACCCCTGTGAAGAACAT  50

seq1  CAACGTCACAATTGCACAACCAGACAAAGAAATTTTCTGGTGACAATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGTCACAATTGCACAACCAGACAAAGAAATTTTCTGGTGACAATCTT  100

seq1  TTGTCTCCCCATCTCACCAGTGGATCAGATCATTGCTTACTGTTTGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCCCCATCTCACCAGTGGATCAGATCATTGCTTACTGTTTGTTTG  150

seq1  TTTGTTTATTTATTTATTTATTTATTTATTTATTTATTTATTATTTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTATTTATTTATTTATTTATTTATTTATTTATTTATTATTTTTAA  200

seq1  AAATTAGGTATTTTCTTCATTTACTTTTCCAATGCTATCCCAAAAGTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGGTATTTTCTTCATTTACTTTTCCAATGCTATCCCAAAAGTCCC  250

seq1  CCATACCCTTCCCCCACTCCCCTACCCACTCACTCCCACTTCTTGGCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACCCTTCCCCCACTCCCCTACCCACTCACTCCCACTTCTTGGCCCT  300

seq1  GGGGTTCCCCTGTACTAAGGCATATAAAGTTTGCAAGACCAATGGGCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTCCCCTGTACTAAGGCATATAAAGTTTGCAAGACCAATGGGCCTC  350

seq1  TCTTTCCACTGATGGCTGACTAGGCCATCTTCTGATACATATGCAGCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCACTGATGGCTGACTAGGCCATCTTCTGATACATATGCAGCTAG  400

seq1  AGACACAAGCTCCGGGGTGGTGGTGGTGGTGGTGG  435
      |||||||||||||||||||||||||||||||||||
seq2  AGACACAAGCTCCGGGGTGGTGGTGGTGGTGGTGG  435

seq1: chr7_100966297_100967435
seq2: B6Ng01-170H14.g_68_1206 (reverse)

seq1  AGGCCTATCATAGTACATTCTGTACCTATAGTAGAAGGCAGAAAAATTGA  50
      |||||||||||||| |||||||||||||||||||||||||| ||||||||
seq2  AGGCCTATCATAGTTCATTCTGTACCTATAGTAGAAGGCAG-AAAATTGA  49

seq1  GGGCCAGGACAAGCCGGATGGGGCATGTGGGATGCATTTC-TCTTTGCTG  99
      ||||||| ||||||| |||| ||||||| ||||||||||| |||||||||
seq2  GGGCCAGAACAAGCCCGATGAGGCATGT-GGATGCATTTCTTCTTTGCTG  98

seq1  -ATTCTG-AAGGCTTTATTGTGCATG-GCTTCAGCCACAGTA-TTTATTC  145
       |||||| ||| |||||||||||||| ||||||| ||||||| ||| |||
seq2  AATTCTGAAAGACTTTATTGTGCATGAGCTTCAG-CACAGTATTTTTTTC  147

seq1  TCCCC-AGAAGCCACCTCTGCCAGGTAGCCATAGTAATCACCTTTCA-TA  193
      ||||| |||||||  |||||||| ||||||||||||||||||||||| ||
seq2  TCCCCAAGAAGCCCACTCTGCCAAGTAGCCATAGTAATCACCTTTCATTA  197

seq1  TTCAGATAGGGCACCTTGATCTCATACTGGAAATGATTGCAGTTCTTGAT  243
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  TTCAGATAGGGCACCTTGATCTCATACTGAAAATGATTGCAGTTC-TGAT  246

seq1  GAGGAGCTTGTCAAGCAGAGCGAAGACATCATGGGAACTGTTTCCAGTTC  293
      || |||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGC-TGTCAAGCAGAGCGAAGACATCATGGGAACTGTTTCCAGTTC  295

seq1  CCTCTTGGTCTTCTCCTTGGAAAGCCCTCATTTTTCGAACTTCTTTTAAC  343
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTC-TGGTCTTCTCCTTGGAAAGCCCTCATTTTTCGAACTTCTTTTAAC  344

seq1  TTTTTCTAACTTGCTTACATTGCCATCTGCCATGGATTTTTGCCCAATGC  393
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTAAC-TGCTTACATTGCCATCTGCCATGGATTTTTGCCCAATGC  393

seq1  TACAGATGACCTTCCAAGAAGATTGCCTGGCAGCAATTACATTCTTGCAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATGACCTTCCAAGAAGATTGCCTGGCAGCAATTACATTCTTGCAG  443

seq1  ATCACAGAAAGGAGATTTTGATCTTCATAAGCGGTTCGTTCAGCTCTGTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGAAAGGAGATTTTGATCTTCATAAGCGGTTCGTTCAGCTCTGTT  493

seq1  ACAGCCTTCATGGCGGAGGCCATGTTGCCTTACTGGTCTTGGTGATGTTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTTCATGGCGGAGGCCATGTTGCCTTACTGGTCTTGGTGATGTTT  543

seq1  GCTTGTTTGTTCACCTCTGCCAGCGCCAGTTGCCCCCACTGCAGTAGCTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTTGTTCACCTCTGCCAGCGCCAGTTGCCCCCACTGCAGTAGCTG  593

seq1  CTCTCTGCCCTCCATGTTGCTCACAACTTGGTCTTGCCTAGAGTTCCCAC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGCCCTCCATGTTGCTCACAACTTGGTCTTGCCTAGAGTTCCCAC  643

seq1  ACTTCCTGATCCCTTGCTTGCCTGCCAGTCTGCTTCCTAATCACTGCCCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTGATCCCTTGCTTGCCTGCCAGTCTGCTTCCTAATCACTGCCCT  693

seq1  TGGTTTCCATTTTTATAGATTTAGATTTGGTTGGTGATGATTGATCTCAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCCATTTTTATAGATTTAGATTTGGTTGGTGATGATTGATCTCAG  743

seq1  TTGTCACAGGAGGAATGGATGTTGGTTCCTGTGCATATTAGATAAATGAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACAGGAGGAATGGATGTTGGTTCCTGTGCATATTAGATAAATGAA  793

seq1  ACCTGTGCCATATCATCATGAGGACATTTGTCAGAACTTACATATCCAAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGCCATATCATCATGAGGACATTTGTCAGAACTTACATATCCAAA  843

seq1  AATAATGTACATGAAAATCTCTGTTCCAATAATGAATATCTGACAGGACT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTACATGAAAATCTCTGTTCCAATAATGAATATCTGACAGGACT  893

seq1  ACGAGCCTGATACAAATATGGATATTGGATCTGGTTAAGGACCTTCATCA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGCCTGATACAAATATGGATATTGGATCTGGTTAAGGACCTTCATCA  943

seq1  GCTAAGTATTGTCAGAATGTAGGGGGGAGAGAAAAGGGAGTGGCGTAGTG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGTATTGTCAGAATGTAGGGGGGAGAGAAAAGGGAGTGGCGTAGTG  993

seq1  GAATGTGATTTTCAGCTTATATGGAAACTGGAACTATAGTAGAGTCTATT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGATTTTCAGCTTATATGGAAACTGGAACTATAGTAGAGTCTATT  1043

seq1  AAAGTCCCATACCCATCTCTCTCCTCAATATCCAACTTCCTTGTTCCTCT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCCATACCCATCTCTCTCCTCAATATCCAACTTCCTTGTTCCTCT  1093

seq1  TTTTTTTACATAGAACATTAATACTATCTCAATTTATATGGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTACATAGAACATTAATACTATCTCAATTTATATGGAATTC  1139