BAC Information

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BAC

Clone NameB6Ng01-170J18
Chromosome7 (Build37)
Map Location 50,732,117 - 50,732,570
singlet/doubletsinglet
Overlap geneA230106M20Rik
Upstream geneBC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik
Downstream gene4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3, Lrrc4b, 0610012D14Rik, Josd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170J18.bB6Ng01-170J18.g
ACCDH961278DH961279
length1,170595
definitionDH961278|Mus musculus domesticus DNA, BAC clone: B6Ng01-170J18, 5' end.DH961279|Mus musculus domesticus DNA, BAC clone: B6Ng01-170J18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcgagagtcagttttggaaaacctatatttgctgtgatttgat
tttggggtgagggcctgaaaaccgttgagcaggaccccagccccagcagc
cagaaggcatgctttcttgcctgtgttctgcttgccttctgctggctcta
ggactcatccaaataccttgccctgaggataaagtttctcccactgaaaa
atctgggctggctctaacattctgcaacctacgatcctacaattgtttat
ttctttgagctactcctcatggaaagcaaatttggatccaacattaaata
gtcaaagcacccagaataagatttgtgtgtgtgtgtgggctagctgtggc
acagaaggaaatccttaggcctgaatgattgcagtggtctcagagacacc
ggaaatcactaaaagacaacaaccaaacatctgaccatgaattggtgagg
gcctatatggaagaacaggtgtaggcagtgtagaggatacataaaagccc
tgctcttgttattagtctgggttctaaaacaaacaacaaaagaaaacaaa
caaaaaattaaaaaaccatccattaggaaggaaggacacactgcagcact
cacatgttaactagtagaaaaccaatgtgctaactaacttagtcattaca
aaatgagtacataggtgcttattgtagggatccagaatgccatgctaggg
aaggctcactaagcccttcagcacctgcctgaaaggaagtaaaatactta
caaaaaaatcagtacgttgccaacttaatttttgattgcttttcaaacaa
actttttagctacacatatgcattactactctgcttgattttgctcgtag
gtcactaaatagagaacaggggaacatattcgagctgttttcattctaag
gaacacccctggccaccatatctatgcagttccttctgtagtccgcatct
aaaaacagcattcctggtttccgttgcacaaagcgctcagaatgacagcc
aattttgattgtacggtggaggttctagtcattccccgtctacaccaaac
ccattaaggaaaaacaggctttatccaatcccctcttccctcactcccag
gcttgttctgtgtgtccccttccccccccccccagtggaaaagatggggg
tgggtgtgtggtgggctacg
gaattctttgatcccttcattcattctttccttccttcgttcgtctggat
gcctcctcctgaacatgaacaagagaagacacataaacaatatgggagca
ttccctcccctcaaaacagtagtgtccatggggtgggggaggaaccctag
gtctcctgcactccaaatcctaggcccctttccactgggttctgagctcc
ccagtccttagcttagccccaccctgcccccgcaggaccttcccggctcc
tactgacaggggcactccaggccctgctgtgcccgccccgctgatgtgtg
tccgtgttgtgcccgtgttgtcccgtgttaagtgtttgtgtccggccccg
ccccccacccccacctcccccacagacggtttcacctctgagggtgagat
cctggaaatctcagacatccagcggggccaggccggggaataccaatgcg
ttactcacaatggagtgaactcggcgcccgacagccgccgtgtgctggtc
acagtgaattgtgagcatcaagggggccacaggggaggaccctgggtgaa
tggggaggaggggtctgcagcattattgtttaatctaggtgggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_50732117_50732570
seq2: B6Ng01-170J18.g_210_663 (reverse)

seq1  TTCCCACCTAGCTTCCACAATCATGCTGCAGACCCCTCCTCCCCATTCAC  50
      ||||||||||| ||  ||||| ||||||||||||||||||||||||||||
seq2  TTCCCACCTAGATTAAACAATAATGCTGCAGACCCCTCCTCCCCATTCAC  50

seq1  CCAGGGTCCTCCCCTGTGGCCCCCTTGATGCTCACAATTCACTGTGACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTCCTCCCCTGTGGCCCCCTTGATGCTCACAATTCACTGTGACCA  100

seq1  GCACACGGCGGCTGTCGGGCGCCGAGTTCACTCCGTTGTGAGTAACGCAT  150
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GCACACGGCGGCTGTCGGGCGCCGAGTTCACTCCATTGTGAGTAACGCAT  150

seq1  TCGTATTCCCCGGCCTGGCCCCGCTGGATGTCTGAGATTTCCAGGATCTC  200
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTCCCCGGCCTGGCCCCGCTGGATGTCTGAGATTTCCAGGATCTC  200

seq1  ACCCTCTGAGGTGAAACCGTCTGTGGGGGAGGTGGGGGTGGGGGGCGGGG  250
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCAGAGGTGAAACCGTCTGTGGGGGAGGTGGGGGTGGGGGGCGGGG  250

seq1  CCGGACACAAACACTTAACACGGGACAACACGGGCACAACACGGACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGACACAAACACTTAACACGGGACAACACGGGCACAACACGGACACAC  300

seq1  ATCAGCGGGGCGGGCACAGCAGGGCCTGGAGTGCCCCTGTCAGTAGGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCGGGGCGGGCACAGCAGGGCCTGGAGTGCCCCTGTCAGTAGGAGC  350

seq1  CGGGAAGGTCCTGCGGGGGCAGGGTGGGGCTAAGCTAAGGACTGGGGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAAGGTCCTGCGGGGGCAGGGTGGGGCTAAGCTAAGGACTGGGGAGC  400

seq1  TCAGAACCCAGTGGAAAGGGGCCTAGGATTTGGAGTGCAGGAGACCTAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACCCAGTGGAAAGGGGCCTAGGATTTGGAGTGCAGGAGACCTAGG  450

seq1  GTTC  454
      ||||
seq2  GTTC  454