BAC Information

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BAC

Clone NameB6Ng01-171B18
Chromosome7 (Build37)
Map Location 86,476,123 - 86,601,351
singlet/doubletdoublet
Overlap geneAbhd2, Rlbp1, BC025462, Polg
Upstream geneNtrk3, Mrpl46, Mrps11, Det1, Isg20l1, Isg20, Acan, Hapln3, Mfge8
Downstream geneAI854517, Rhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2, 2610034B18Rik, Zfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171B18.bB6Ng01-171B18.g
ACCGA000079GA000080
length1,0891,087
definitionB6Ng01-171B18.b B6Ng01-171B18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,476,123 - 86,477,200)(86,600,264 - 86,601,351)
sequence
gaattccctaaatggctgactacacactcttaggctcttcggtgctgcct
gcctgtgaaagataattcattaaggaaaagccttgcatgtcagctccatt
gatctcgtgctaatgagggccagagtgtgcagaattctgtgcatttcatc
atttgattctcactgcctctgaggcagctattaattcgagtcccaacttc
acaggcctagggaggttaagcgtcttaacgtgggtcgtgcggcagccaga
ggagcagccagtgtatgtttctcaatcccaacctcacaccatttctggtc
tattactcctttcctacttgattagaatagcagagtatagagaaacaagt
gtatttgaacatttcaaagtatctctcagggctggagagatggctcagcg
gttaagagcactgactgctcttctgaaggtcctgagttcaaattccagca
accacatggtggctcacaactatccgtaatgagatctgataccctcttct
ggagtgtctgaaagcagctacagtgtacttacatataataaataattttc
ttttaaaaaaagtgactctccattttattagtgcaagtatagatttcagt
gctgagaactgtcagtgctgagaactgtcctgagttctttatataccaag
ttaagtcagttgtcccctctgacagctaaggaaactgaggcccaagcaag
gctgaatgactagctagaaatggtgacctaggtctcaaacctaggcaacc
tcgccctctcctggagtccctgccccatgcttgagcaaccactaagcagc
aatggctttccgtcagatgcgttttagacgggagaccacagggcattcaa
gagctttctcagaggcacacaagtgagcctggtggttttggagtctgtct
tttaatttgtctaacatcctccagtgtctggagtgggaacacagctgaga
aatcccagccttcaaggaccgtaataaagaacagcctgcctacttttggg
cagaactgagaagccacatagccacaggtcaatctaagctatttgccaga
cttaatcccaaaagaacagtgtcactatgcagcttctta
gaattcagggctgagccaacctctagttctggtgagcaagacacctacct
gcttgggctctctgggtgggtagtggacagttgggacttcccaccagagt
tcactaggttttgggagacttggagatgctgccctattcccctgtggttc
ttaactgtaggggaccaaggagggaacctgtgaccatgctctcctgtcac
tttgcaatttgcctgctcagtttcaggccctttccccacccccacctccc
ctacccgctggcccttgctgaatgcaggtgctggagcagggcctgatctg
ggtgtgtggccccacagcctgctgcttgtgcccccaaatccagccagccc
acgtatcaccatggcaacggaccttataatgatgtgaatatccctggttg
ctggtttttcaagctgcctcacaaggtatggtttgtggctgcctcatgtt
ctcactgtgattctgacccacagtaggacttcatgcttactcagaccagg
aaactgctttttgtgggattgacagtcatagaggctcctaaatcatatga
tttagggcaattttcatgtcttattgcttttgattttctattgaaaattg
agtggtgagaggcatcctggtggggttacctgacatatatcaagtgtgta
acattgtatctgtcatctggtagcttccgtgggctgttgttactagcttt
gtctgatcatagcattcttgtatgtgcacttaaagatatgcaggatacct
ggtgggaactgccccagctgctggaggttttaggttctgttgggagaaag
cccagtgtccgtgtccgtttcctacctggtgctgtgctacctgtcccaac
ccttttctttgtcctccacaggacggtaacaactacaatgtgggcagtcc
cttttgccaaagattccctgccagatggaggatggcaccctgcaggctgg
cccagagtgccagtgggcctcgtgccttgaaaataattaaaatgatttct
ttttggaaggatgctcataaacgtatcagtaagccaaaggtggggttacc
aggagctgtctgataagcctgtccaggcatctgtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_86476123_86477200
seq2: B6Ng01-171B18.b_44_1132

seq1  GAATTCCCTAAATGGCTGACTACACACTCTTAGGCTCTTCGGTGCTGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTAAATGGCTGACTACACACTCTTAGGCTCTTCGGTGCTGCCT  50

seq1  GCCTGTGAAAGATAATTCATTAAGGAAAAGCCTTGCATGTCAGCTCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGAAAGATAATTCATTAAGGAAAAGCCTTGCATGTCAGCTCCATT  100

seq1  GATCTCGTGCTAATGAGGGCCAGAGTGTGCAGAATTCTGTGCATTTCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCGTGCTAATGAGGGCCAGAGTGTGCAGAATTCTGTGCATTTCATC  150

seq1  ATTTGATTCTCACTGCCTCTGAGGCAGCTATTAATTCGAGTCCCAACTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATTCTCACTGCCTCTGAGGCAGCTATTAATTCGAGTCCCAACTTC  200

seq1  ACAGGCCTAGGGAGGTTAAGCGTCTTAACGTGGGTCGTGCGGCAGCCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCTAGGGAGGTTAAGCGTCTTAACGTGGGTCGTGCGGCAGCCAGA  250

seq1  GGAGCAGCCAGTGTATGTTTCTCAATCCCAACCTCACACCATTTCTGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGCCAGTGTATGTTTCTCAATCCCAACCTCACACCATTTCTGGTC  300

seq1  TATTACTCCTTTCCTACTTGATTAGAATAGCAGAGTATAGAGAAACAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTCCTTTCCTACTTGATTAGAATAGCAGAGTATAGAGAAACAAGT  350

seq1  GTATTTGAACATTTCAAAGTATCTCTCAGGGCTGGAGAGATGGCTCAGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGAACATTTCAAAGTATCTCTCAGGGCTGGAGAGATGGCTCAGCG  400

seq1  GTTAAGAGCACTGACTGCTCTTCTGAAGGTCCTGAGTTCAAATTCCAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGAGCACTGACTGCTCTTCTGAAGGTCCTGAGTTCAAATTCCAGCA  450

seq1  ACCACATGGTGGCTCACAACTATCCGTAATGAGATCTGATACCCTCTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATGGTGGCTCACAACTATCCGTAATGAGATCTGATACCCTCTTCT  500

seq1  GGAGTGTCTGAAAGCAGCTACAGTGTACTTACATATAATAAATAATTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGTCTGAAAGCAGCTACAGTGTACTTACATATAATAAATAATTTTC  550

seq1  TTTTAAAAAAAGTGACTCTCCATTTTATTAGTGCAAGTATAGATTTCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAAAAGTGACTCTCCATTTTATTAGTGCAAGTATAGATTTCAGT  600

seq1  GCTGAGAACTGTCAGTGCTGAGAACTGTCCTGAGTTCTTTATATACCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAACTGTCAGTGCTGAGAACTGTCCTGAGTTCTTTATATACCAAG  650

seq1  TTAAGTCAGTTGTCCCCTCTGACAGCTAAGGAAACTGAGGCCCAAGCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTCAGTTGTCCCCTCTGACAGCTAAGGAAACTGAGGCCCAAGCAAG  700

seq1  GCTGAATGACTAGCTAGAAATGGTGACCTAGGTCTCAAACCTAGGCAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAATGACTAGCTAGAAATGGTGACCTAGGTCTCAAACCTAGGCAACC  750

seq1  TCGCCCTCTCCTGGAGTCCCTGCCCCATGCTTGAGCAACCACTAAGCAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCCTCTCCTGGAGTCCCTGCCCCATGCTTGAGCAACCACTAAGCAGC  800

seq1  AATGGCTTTCCGTCAGATGCGTTTTAGACGGGAGACCACAGGGCATTCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTTTCCGTCAGATGCGTTTTAGACGGGAGACCACAGGGCATTCAA  850

seq1  GAGC-TTCTCAGAGGCACACAAGTGAGCCTGGTGG-TTTGGAGTCTGTCT  898
      |||| |||||||||||||||||||||||||||||| ||||||||||||||
seq2  GAGCTTTCTCAGAGGCACACAAGTGAGCCTGGTGGTTTTGGAGTCTGTCT  900

seq1  TTT-ATTTGTCTAACATCCTCCAGTGTCTGGAGTGGG-ACACAGCTGAG-  945
      ||| ||||||||||||||||||||||||||||||||| ||||||||||| 
seq2  TTTAATTTGTCTAACATCCTCCAGTGTCTGGAGTGGGAACACAGCTGAGA  950

seq1  AATCCCAG-CTTC-AGGACCGT-ATAAAGAACAGCTTG-CTAC-TTTGGG  990
      |||||||| |||| |||||||| |||||||||||| || |||| ||||||
seq2  AATCCCAGCCTTCAAGGACCGTAATAAAGAACAGCCTGCCTACTTTTGGG  1000

seq1  CAG-ACTGAGAAG-CACATAGCCACA-GTCAATCTAAGCTTATTTGCCAG  1037
      ||| ||||||||| |||||||||||| |||||||||||| ||||||||||
seq2  CAGAACTGAGAAGCCACATAGCCACAGGTCAATCTAAGC-TATTTGCCAG  1049

seq1  ACTTA--TCCAAAAG-ACAGTGTTCACTATTGGCAGGCTTCTTA  1078
      |||||   ||||||| |||||| |||||||  ||| ||||||||
seq2  ACTTAATCCCAAAAGAACAGTG-TCACTAT--GCA-GCTTCTTA  1089

seq1: chr7_86600264_86601351
seq2: B6Ng01-171B18.g_66_1152 (reverse)

seq1  CCCACAGATGCCT-GACAGACATA-CAGACAGGCCTCCT-GTAACCCCA-  46
      ||||||||||||| ||||| | || |||||||  ||||| ||||||||| 
seq2  CCCACAGATGCCTGGACAGGCTTATCAGACAG--CTCCTGGTAACCCCAC  48

seq1  CTTTGGCCTACCTGATACGTTTATGAGCATTCCTCCAAAAAGAAATCATT  96
      ||||||| || ||||||||||||||||||| | |||||||||||||||||
seq2  CTTTGGCTTA-CTGATACGTTTATGAGCATCCTTCCAAAAAGAAATCATT  97

seq1  TTATTTATTTCCAGGGCACGAGGCCCACTGGCACCTCCTGGGCCAGCCTG  146
      ||| |||||| || ||||||||||||||||||||   |||||||||||||
seq2  TTAATTATTTTCAAGGCACGAGGCCCACTGGCAC--TCTGGGCCAGCCTG  145

seq1  CAGGGTGCCATCCTCCATCTTGGGCAGGAAATCTTTGGC-AAAGGGACTG  195
      ||||||||||||||||||||  |||||| |||||||||| ||||||||||
seq2  CAGGGTGCCATCCTCCATCT--GGCAGGGAATCTTTGGCAAAAGGGACTG  193

seq1  CCCACATTGTAGTTGTTACCGTCCTGTGGAGGACAAAG-AAAGGGTTGGG  244
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCCACATTGTAGTTGTTACCGTCCTGTGGAGGACAAAGAAAAGGGTTGGG  243

seq1  ACAGGTAGCACAGCACCAGGTAGGAAACGGACACGGACACTGGGCCTTCT  294
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACAGGTAGCACAGCACCAGGTAGGAAACGGACACGGACACTGGGCTTTCT  293

seq1  CCCAACAGAACCTAAAACCTCCAGCAGCTGGGGCAGTTCCCACCAGGTAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACAGAACCTAAAACCTCCAGCAGCTGGGGCAGTTCCCACCAGGTAT  343

seq1  CCTGCATATCTTTAAGTGCACATACAAGAATGCTATGATCAGACAAAGCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATATCTTTAAGTGCACATACAAGAATGCTATGATCAGACAAAGCT  393

seq1  AGTAACAACAGCCCACGGAAGCTACCAGATGACAGATACAATGTTACACA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACAACAGCCCACGGAAGCTACCAGATGACAGATACAATGTTACACA  443

seq1  CTTGATATATGTCAGGTAACCCCACCAGGATGCCTCTCACCACTCAATTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATATATGTCAGGTAACCCCACCAGGATGCCTCTCACCACTCAATTT  493

seq1  TCAATAGAAAATCAAAAGCAATAAGACATGAAAATTGCCCTAAATCATAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAGAAAATCAAAAGCAATAAGACATGAAAATTGCCCTAAATCATAT  543

seq1  GATTTAGGAGCCTCTATGACTGTCAATCCCACAAAAAGCAGTTTCCTGGT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGGAGCCTCTATGACTGTCAATCCCACAAAAAGCAGTTTCCTGGT  593

seq1  CTGAGTAAGCATGAAGTCCTACTGTGGGTCAGAATCACAGTGAGAACATG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTAAGCATGAAGTCCTACTGTGGGTCAGAATCACAGTGAGAACATG  643

seq1  AGGCAGCCACAAACCATACCTTGTGAGGCAGCTTGAAAAACCAGCAACCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCCACAAACCATACCTTGTGAGGCAGCTTGAAAAACCAGCAACCA  693

seq1  GGGATATTCACATCATTATAAGGTCCGTTGCCATGGTGATACGTGGGCTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATATTCACATCATTATAAGGTCCGTTGCCATGGTGATACGTGGGCTG  743

seq1  GCTGGATTTGGGGGCACAAGCAGCAGGCTGTGGGGCCACACACCCAGATC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATTTGGGGGCACAAGCAGCAGGCTGTGGGGCCACACACCCAGATC  793

seq1  AGGCCCTGCTCCAGCACCTGCATTCAGCAAGGGCCAGCGGGTAGGGGAGG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCTGCTCCAGCACCTGCATTCAGCAAGGGCCAGCGGGTAGGGGAGG  843

seq1  TGGGGGTGGGGAAAGGGCCTGAAACTGAGCAGGCAAATTGCAAAGTGACA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTGGGGAAAGGGCCTGAAACTGAGCAGGCAAATTGCAAAGTGACA  893

seq1  GGAGAGCATGGTCACAGGTTCCCTCCTTGGTCCCCTACAGTTAAGAACCA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCATGGTCACAGGTTCCCTCCTTGGTCCCCTACAGTTAAGAACCA  943

seq1  CAGGGGAATAGGGCAGCATCTCCAAGTCTCCCAAAACCTAGTGAACTCTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAATAGGGCAGCATCTCCAAGTCTCCCAAAACCTAGTGAACTCTG  993

seq1  GTGGGAAGTCCCAACTGTCCACTACCCACCCAGAGAGCCCAAGCAGGTAG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAGTCCCAACTGTCCACTACCCACCCAGAGAGCCCAAGCAGGTAG  1043

seq1  GTGTCTTGCTCACCAGAACTAGAGGTTGGCTCAGCCCTGAATTC  1088
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTGCTCACCAGAACTAGAGGTTGGCTCAGCCCTGAATTC  1087