BAC Information

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BAC

Clone NameB6Ng01-171B20
Chromosome7 (Build37)
Map Location 110,059,027 - 110,059,811
singlet/doubletsinglet
Overlap genenone
Upstream gene2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571
Downstream geneOlfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171B20.bB6Ng01-171B20.g
ACCGA000083GA000084
length1,143785
definitionB6Ng01-171B20.b B6Ng01-171B20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaaacctgataaacagcttcagtgaagtagctggatataaaat
taactcaaacaaatcaatggcctttctctacacaaaggataatcggactg
agaaagaaattagggaaacaacacccttcacaatagtcacaaataatata
aaacaccttggtgtgactctaactaaggaagtgaaagatctgtatgataa
aaacttcaagtctctgaagaaagaaattataaaagatctcagaagatgga
aagatctcccatgctcatggattggcaggatcaatatagtaaaaataact
atcttgccaaaagccatctacagattcaatgcaatccccatcaaaattcc
aactcaattcttcaacgaattagaaagagcaatcggcaaattcatctgga
ataaaaaaaaaaaaaacctaggatagcaaaaactcttctaaaggataaaa
gaacctctggtggaatcaccatgcctgacctaaaggtgtactacagagca
attgtgattaaaaaaaaaaaaaaactgcatggttctggtatagcgacaga
caagtagaccaatggaataagattgaagacacagaaatgaacccacacac
ctatggtcacttgatcttcaacatggaagctaaaaccatccagtggaaga
aagacagcattttcaacaaatcgtgctggcaaaactggttatcatgtaga
agaatgtgaattgatccattcctatctccttgtactaaggtcaaatctaa
gtggatcaaggaacttcacataaaaccagagacactgaaacttatagagg
aaaaagtggggaaaagcctcaaagatatggcacaggggaaaaattcctga
atagaacagcaatggcttgtgctgtaagattgagattgacaaatgggacc
tcatgaactgcaaagcttctgcaagcaaaggaccacatcatagacaaaag
ccaccaacagattggaaagatctttactatcttacattcagaatagggac
taatttcaatatatataagactcaggagtgactcagaaatcattacccat
taaaatggccgaacttacaagattccactgagaatctgaatgctgagcct
gaagttcatctcactctcgaaatgccattcgaacacaccctga
gaattcattatgttggccaactactcctgtacatgggggtctgacctgga
aaatagttgataaacccattgacatttcattggagaaaactgataaaaat
gacttttaacgacatatcgatacattagatattttcttaaatcatttatt
tctcagtgagcccttgggttcatgatcccttcttttccttaagtatatgt
cttagatttaacttcacagtatacttaggctatgtagggtgatcttgatt
ttaaaccaaggcaaaacactaggaagaagaaaccacagggaaatatgctt
gcagaaaggagcatagctgtcctctgagaggcttcacctagctgcttatg
gaaacagatgtagagacccacaccaaaacaggcagagcttggaatcttgt
gaaagagggagaaataggatgtaagaagccagaggggtcaagcacactat
aagaaaacccacagaagcaactaacctgggctcatagaggctcacagaga
ctgaaccaccaaccagagagcatgcatgggatggaactagattccctaca
catatgaaacagatgtgcaccttgttcttcatgtgggacctctaacaact
gcaacatgggctgtctctgactctgttgcctgtctttggatccctttccc
aggactgggctgtcttgtcaataggagaaaatgtacctggtcctactgca
acttgatatgctaaggcaagttgatatcagtggaaggcctccccttcgct
gaggagaaaggagggggtagagggaggtgagatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_110059027_110059811
seq2: B6Ng01-171B20.g_68_852

seq1  GAATTCATTATGTTGGCCAACTACTCCTGTACATGGGGGTCTGACCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTATGTTGGCCAACTACTCCTGTACATGGGGGTCTGACCTGGA  50

seq1  AAATAGTTGATAAACCCATTGACATTTCATTGGAGAAAACTGATAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTTGATAAACCCATTGACATTTCATTGGAGAAAACTGATAAAAAT  100

seq1  GACTTTTAACGACATATCGATACATTAGATATTTTCTTAAATCATTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTAACGACATATCGATACATTAGATATTTTCTTAAATCATTTATT  150

seq1  TCTCAGTGAGCCCTTGGGTTCATGATCCCTTCTTTTCCTTAAGTATATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTGAGCCCTTGGGTTCATGATCCCTTCTTTTCCTTAAGTATATGT  200

seq1  CTTAGATTTAACTTCACAGTATACTTAGGCTATGTAGGGTGATCTTGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATTTAACTTCACAGTATACTTAGGCTATGTAGGGTGATCTTGATT  250

seq1  TTAAACCAAGGCAAAACACTAGGAAGAAGAAACCACAGGGAAATATGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCAAGGCAAAACACTAGGAAGAAGAAACCACAGGGAAATATGCTT  300

seq1  GCAGAAAGGAGCATAGCTGTCCTCTGAGAGGCTTCACCTAGCTGCTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGGAGCATAGCTGTCCTCTGAGAGGCTTCACCTAGCTGCTTATG  350

seq1  GAAACAGATGTAGAGACCCACACCAAAACAGGCAGAGCTTGGAATCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGATGTAGAGACCCACACCAAAACAGGCAGAGCTTGGAATCTTGT  400

seq1  GAAAGAGGGAGAAATAGGATGTAAGAAGCCAGAGGGGTCAAGCACACTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGGGAGAAATAGGATGTAAGAAGCCAGAGGGGTCAAGCACACTAT  450

seq1  AAGAAAACCCACAGAAGCAACTAACCTGGGCTCATAGAGGCTCACAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACCCACAGAAGCAACTAACCTGGGCTCATAGAGGCTCACAGAGA  500

seq1  CTGAACCACCAACCAGAGAGCATGCATGGGATGGAACTAGATTCCCTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACCACCAACCAGAGAGCATGCATGGGATGGAACTAGATTCCCTACA  550

seq1  CATATGAAACAGATGTGCACCTTGTTCTTCATGTGGGACCTCTAACAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGAAACAGATGTGCACCTTGTTCTTCATGTGGGACCTCTAACAACT  600

seq1  GCAACATGGGCTGTCTCTGACTCTGTTGCCTGTCTTTGGATCCCTTTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATGGGCTGTCTCTGACTCTGTTGCCTGTCTTTGGATCCCTTTCCC  650

seq1  AGGACTGGGCTGTCTTGTCAATAGGAGAAAATGTACCTGGTCCTACTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGGGCTGTCTTGTCAATAGGAGAAAATGTACCTGGTCCTACTGCA  700

seq1  ACTTGATATGCTAAGGCAAGTTGATATCAGTGGAAGGCCTCCCCTTCGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATATGCTAAGGCAAGTTGATATCAGTGGAAGGCCTCCCCTTCGCT  750

seq1  GAGGAGAAAGGAGGGGGTAGAGGGAGGTGAGATGA  785
      |||||||||||||||||||||||||||||||||||
seq2  GAGGAGAAAGGAGGGGGTAGAGGGAGGTGAGATGA  785