BAC Information

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BAC

Clone NameB6Ng01-171I03
Chromosome7 (Build37)
Map Location 116,037,884 - 116,183,788
singlet/doubletdoublet
Overlap geneOlfr519, Nlrp10, Eif3s5, BC049265, Tub, Ric3
Upstream geneOlfr472, Olfr473, LOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503, Olfr504, Olfr505-ps1, Olfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513, Olfr514, Olfr515-ps1, Olfr516, Olfr517, Olfr518
Downstream geneLmo1, Stk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1, Tmem41b, Ipo7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171I03.bB6Ng01-171I03.g
ACCGA000372GA000373
length1,0991,076
definitionB6Ng01-171I03.b B6Ng01-171I03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,037,884 - 116,038,993)(116,182,698 - 116,183,788)
sequence
gaattcaactgtagagctgtgattttgcctcctcatcacaatagcagagc
cctatgttggtcttagggagaaattttagaaaccaattttctatcattga
ttcttgagatcagaaaatgacgttagaaaataccacgtaggaccattctg
aatctacgattcacttgctctctttaaaagaaaatacacctatacttgga
gtttgtgtcacacactcactggttgagcacccatcaccaaggaatgtcta
cactcgttcagataaacctgagctatacactccacagaagacacccgagc
cactctgtgcatctttgctacccaaagctctaactcctatcacctgattg
ccatttgccagagcactcactacaaataaaaataatccaatctttatatg
atgtatgcctaaaataatataaactagaatataaactgcaagttgacagt
tctagactttgttctagactttgtgttgttcccagaattgaaaacaggta
gccatgtatgtaatagataaaagtgataaactggaacttaataaatccat
agaggaataattatttaaattaagaaagcctgaactctaccctcagttga
ctactgtgtctaaagggaaataatcaacaacagaactaagaaaatccaca
ttcactgcctgacttttctagaagcttgaggctgctatggggcatgagca
gcactggtttaagaattggtctggacctagccacaacagcccagcttgag
cctgtgcccctccctgtatgtggaccccctacctgtatggtcaggaatta
ccccagacagcccttctggctctgagctgggcatcttattcatgcagtaa
aaagaggactaagctgagggaggtctaacaagagtcagcagtaaacaagc
atggaattcctgattctctaccatcttccaatcttacatacactagctgt
tttctttctgttccaaatccccttcagagcccccttctgtacaagctcct
cactctcctccactgtctcccctctactattcctcctccactctacgccc
tgttcgaatttctccccactgtcagtactcgtacatccttgagagtctg
gaattcttgaggaattggagtagatggtctgggtttatacagagttcctc
accaccacatagtttgcaatggagacatcagaaggaagctgctcagatgc
cttatataagaatggcaaatcacattggttgcatgacacagagaaatgcc
aatgatacatatgtataggacgacagtacattatatattctttctttatt
aaacaacataatccttctttattaaaaaaaaagcaggaaatactatgcat
atgattttaaaagccagaggtaaacaaattaccagtggaaggattttggg
tgaattgtgttttcttctaaaacttgtttgtaattaaaactagtaggaaa
aatataacaaaataaaggctataccaccctcctaaaaaactgcagcgttt
taatacttttataaatgttgtaatacttttataaatttgaatatttgtat
aatactgttgtaaaaatgtctctagatacctcacatgtaccaaaaggttg
ctgtttttcgcaattgatgggcaaaagtggtgtctgttggagctgaatat
gcagttatcatcagtgtgcaaatggatttgagttctgcagtttccactgt
gtagtgagcactgcattgccagcactgccatatgagcccccacatggtcc
atctgccgctcggcgtggcctggcacacacagatttagttcatttcattc
cttacttggcagcacagcctctttcttattatcatagccgaggtttggtg
cagtgttactcactttgcttacctgtttgttgttttttccttttgttcca
ttttgtcaaaatgaagatgccaacattggaagttctgtctctaaaatgca
gttcttgccttgtggggtcttggtcatgtctgctaacttgcccagcttct
gacagttacagactattttggttgttttgataagtagaaagcactgtggt
tttatttttcaagagcttagcattcctttcccagccccacctcaacagaa
gattgactggtcaaatagaactgtattactagcctttagctagcctcttc
atctgtagcctgatgctcatgctgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_116037884_116038993
seq2: B6Ng01-171I03.b_43_1141

seq1  GAATTCAACTGTAGAGCTGTGATTTTGCCTCCTCATCACAATAGCAGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTGTAGAGCTGTGATTTTGCCTCCTCATCACAATAGCAGAGC  50

seq1  CCTATGTTGGTCTTAGGGAGAAATTTTAGAAACCAATTTTCTATCATTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGTTGGTCTTAGGGAGAAATTTTAGAAACCAATTTTCTATCATTGA  100

seq1  TTCTTGAGATCAGAAAATGACGTTAGAAAATACCACGTAGGACCATTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAGATCAGAAAATGACGTTAGAAAATACCACGTAGGACCATTCTG  150

seq1  AATCTACGATTCACTTGCTCTCTTTAAAAGAAAATACACCTATACTTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTACGATTCACTTGCTCTCTTTAAAAGAAAATACACCTATACTTGGA  200

seq1  GTTTGTGTCACACACTCACTGGTTGAGCACCCATCACCAAGGAATGTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGTCACACACTCACTGGTTGAGCACCCATCACCAAGGAATGTCTA  250

seq1  CACTCGTTCAGATAAACCTGAGCTATACACTCCACAGAAGACACCCGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCGTTCAGATAAACCTGAGCTATACACTCCACAGAAGACACCCGAGC  300

seq1  CACTCTGTGCATCTTTGCTACCCAAAGCTCTAACTCCTATCACCTGATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGTGCATCTTTGCTACCCAAAGCTCTAACTCCTATCACCTGATTG  350

seq1  CCATTTGCCAGAGCACTCACTACAAATAAAAATAATCCAATCTTTATATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGCCAGAGCACTCACTACAAATAAAAATAATCCAATCTTTATATG  400

seq1  ATGTATGCCTAAAATAATATAAACTAGAATATAAACTGCAAGTTGACAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGCCTAAAATAATATAAACTAGAATATAAACTGCAAGTTGACAGT  450

seq1  TCTAGACTTTGTTCTAGACTTTGTGTTGTTCCCAGAATTGAAAACAGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGACTTTGTTCTAGACTTTGTGTTGTTCCCAGAATTGAAAACAGGTA  500

seq1  GCCATGTATGTAATAGATAAAAGTGATAAACTGGAACTTAATAAATCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTATGTAATAGATAAAAGTGATAAACTGGAACTTAATAAATCCAT  550

seq1  AGAGGAATAATTATTTAAATTAAGAAAGCCTGAACTCTACCCTCAGTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAATAATTATTTAAATTAAGAAAGCCTGAACTCTACCCTCAGTTGA  600

seq1  CTACTGTGTCTAAAGGGAAATAATCAACAACAGAACTAAGAAAATCCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTGTCTAAAGGGAAATAATCAACAACAGAACTAAGAAAATCCACA  650

seq1  TTCACTGCCTGACTTTTCTAGAAGCTTGAGGCTGCTATGGGGCATGAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGCCTGACTTTTCTAGAAGCTTGAGGCTGCTATGGGGCATGAGCA  700

seq1  GCACTGGTTTAAGAATTGGTCTGGACCTAGCCACAACAGCCCAGCTTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGTTTAAGAATTGGTCTGGACCTAGCCACAACAGCCCAGCTTGAG  750

seq1  CCTGTGCCCCTCCCTGTATGTGGACCCCCTACCTGTATGGTCAGGAATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCCCCTCCCTGTATGTGGACCCCCTACCTGTATGGTCAGGAATTA  800

seq1  CCCCAGACAGCCCTTCTGGCTCTGAGCTGGGCATCTTATTCATGCAGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGACAGCCCTTCTGGCTCTGAGCTGGGCATCTTATTCATGCAGTAA  850

seq1  AAAGAGGACTAAGCTGAGGGAGGTCTAACAAGAGTCAGGCAGTAAACAAG  900
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAAGAGGACTAAGCTGAGGGAGGTCTAACAAGAGTCA-GCAGTAAACAAG  899

seq1  CATGGAATTCCTGATTCTCTACCATCTTCCAATCTTACATACAACTAGCT  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CATGGAATTCCTGATTCTCTACCATCTTCCAATCTTACATAC-ACTAGCT  948

seq1  GTTTTCTTTCTTGTCCAAATCCCCTTCAGAGCCCCCTTCTGTACAAAGCT  1000
      |||||||||||  ||||||||||||||||||||||||||||||| |||||
seq2  GTTTTCTTTCTGTTCCAAATCCCCTTCAGAGCCCCCTTCTGTAC-AAGCT  997

seq1  CCTCACTCTCCCTCCACTTGTCTCCCCTCTACCTAATTCTCTCTCCACTC  1050
      ||||||||| ||||||| ||||||||||||| ||| | ||| ||||||||
seq2  CCTCACTCT-CCTCCAC-TGTCTCCCCTCTA-CTATTCCTC-CTCCACTC  1043

seq1  TAACGCCCCTTGTTTCCAGATTTCTCCCCACTGTCAGTACTCGTACATCC  1100
      | ||||||  ||||  |  |||||||||||||||||||||||||||||||
seq2  T-ACGCCC--TGTT--CGAATTTCTCCCCACTGTCAGTACTCGTACATCC  1088

seq1  TT-AGAGTCTG  1110
      || ||||||||
seq2  TTGAGAGTCTG  1099

seq1: chr7_116182698_116183788
seq2: B6Ng01-171I03.g_65_1140 (reverse)

seq1  AACAGCATGAGCCTTCAGCGCTACAGATGGAGAGGGCTTAGCTTAAGGCT  50
      ||||||||||| | |||| |||||||||| |||||   ||||| ||||||
seq2  AACAGCATGAG-CATCAG-GCTACAGATGAAGAGG--CTAGCTAAAGGCT  46

seq1  AGTATTTACAATTTCTATTTGGAACCAGTTCCAAATCTTCTGGTGGAGGT  100
      ||||  ||| | |||||||||  ||||||    |||||||| || |||||
seq2  AGTA-ATAC-AGTTCTATTTG--ACCAGT---CAATCTTCT-GTTGAGGT  88

seq1  GGGGCTGGGAAAAGGAATGCTAAGCTCTTTGAAAAAT-AAACCACAGTGC  149
      ||||||||| ||||||||||||||||| ||||||||| ||||||||||||
seq2  GGGGCTGGG-AAAGGAATGCTAAGCTC-TTGAAAAATAAAACCACAGTGC  136

seq1  TTTCTACTTATCAAAACAACC-AAATAGTCTGTAACTGTCAGAAGCTGGG  198
      ||||||||||||||||||||| ||||||||||||||||||||||||| ||
seq2  TTTCTACTTATCAAAACAACCAAAATAGTCTGTAACTGTCAGAAGCT-GG  185

seq1  GCAAGTTAGCAAGACATGACCAAGACCCCACAAGGCAAGAACTGCATTTT  248
      |||||||||| ||||||||||||||||||||||||||||||||||| |||
seq2  GCAAGTTAGC-AGACATGACCAAGACCCCACAAGGCAAGAACTGCA-TTT  233

seq1  TAGAGACAGAACTTCCAATGTTGGCATCTTCATTTTGACAAAATGGAACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACAGAACTTCCAATGTTGGCATCTTCATTTTGACAAAATGGAACA  283

seq1  AAAGGAAAAAACAACAAACAGGTAAGCAAAGTGAGTAACACTGCACCAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAAAACAACAAACAGGTAAGCAAAGTGAGTAACACTGCACCAAA  333

seq1  CCTCGGCTATGATAATAAGAAAGAGGCTGTGCTGCCAAGTAAGGAATGAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGCTATGATAATAAGAAAGAGGCTGTGCTGCCAAGTAAGGAATGAA  383

seq1  ATGAACTAAATCTGTGTGTGCCAGGCCACGCCGAGCGGCAGATGGACCAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTAAATCTGTGTGTGCCAGGCCACGCCGAGCGGCAGATGGACCAT  433

seq1  GTGGGGGCTCATATGGCAGTGCTGGCAATGCAGTGCTCACTACACAGTGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGCTCATATGGCAGTGCTGGCAATGCAGTGCTCACTACACAGTGG  483

seq1  AAACTGCAGAACTCAAATCCATTTGCACACTGATGATAACTGCATATTCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCAGAACTCAAATCCATTTGCACACTGATGATAACTGCATATTCA  533

seq1  GCTCCAACAGACACCACTTTTGCCCATCAATTGCGAAAAACAGCAACCTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAACAGACACCACTTTTGCCCATCAATTGCGAAAAACAGCAACCTT  583

seq1  TTGGTACATGTGAGGTATCTAGAGACATTTTTACAACAGTATTATACAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTACATGTGAGGTATCTAGAGACATTTTTACAACAGTATTATACAAA  633

seq1  TATTCAAATTTATAAAAGTATTACAACATTTATAAAAGTATTAAAACGCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAATTTATAAAAGTATTACAACATTTATAAAAGTATTAAAACGCT  683

seq1  GCAGTTTTTTAGGAGGGTGGTATAGCCTTTATTTTGTTATATTTTTCCTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTTTTAGGAGGGTGGTATAGCCTTTATTTTGTTATATTTTTCCTA  733

seq1  CTAGTTTTAATTACAAACAAGTTTTAGAAGAAAACACAATTCACCCAAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTTAATTACAAACAAGTTTTAGAAGAAAACACAATTCACCCAAAA  783

seq1  TCCTTCCACTGGTAATTTGTTTACCTCTGGCTTTTAAAATCATATGCATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCACTGGTAATTTGTTTACCTCTGGCTTTTAAAATCATATGCATA  833

seq1  GTATTTCCTGCTTTTTTTTTAATAAAGAAGGATTATGTTGTTTAATAAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCCTGCTTTTTTTTTAATAAAGAAGGATTATGTTGTTTAATAAAG  883

seq1  AAAGAATATATAATGTACTGTCGTCCTATACATATGTATCATTGGCATTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATATATAATGTACTGTCGTCCTATACATATGTATCATTGGCATTT  933

seq1  CTCTGTGTCATGCAACCAATGTGATTTGCCATTCTTATATAAGGCATCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTCATGCAACCAATGTGATTTGCCATTCTTATATAAGGCATCTG  983

seq1  AGCAGCTTCCTTCTGATGTCTCCATTGCAAACTATGTGGTGGTGAGGAAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTTCCTTCTGATGTCTCCATTGCAAACTATGTGGTGGTGAGGAAC  1033

seq1  TCTGTATAAACCCAGACCATCTACTCCAATTCCTCAAGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATAAACCCAGACCATCTACTCCAATTCCTCAAGAATTC  1076