BAC Information

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BAC

Clone NameB6Ng01-171P08
Chromosome7 (Build37)
Map Location 101,454,477 - 101,588,361
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC666783, EG638305, EG545982
Downstream geneEG666816, LOC100040132
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171P08.bB6Ng01-171P08.g
ACCGA000705GA000706
length1,0881,060
definitionB6Ng01-171P08.b B6Ng01-171P08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,587,271 - 101,588,361)(101,454,477 - 101,455,547)
sequence
gaattcaccaacttgtttctaatatgaagcttgctatacctgactataga
gaagatacctgtctcagtgggattccctaggtctattatggtattccctt
gtttgggtgagatttgctactgtccttagttaatactttgcagaccaggt
ctgagctgctggctctgtcttttgtaatgcttaattagttactgaatagg
taacttccttactgcattcctgcctgattccaaggtcttctggaaccttg
gaacactgatgaaggctctggctatgtcagaattcaatcttaaaaggcac
ttataataagataatactaaaagagagcacatggatccatacaccagact
aacgcagggatagggtatgagtatatgggttaatgagaacgccaaacctc
caggaggtgggtttccatgaaactttatgcctctttatgcctcgtgagtg
cttctaggtttctcagcctgtcaagcagatttcactggagtgcgtggcaa
ccagaaaactcaagcaggccctcagacaatagattgtatgtgtttggatt
aaaaagatatgatagaactatgataaactagaaatagcacttttacagtg
tattcaatgtaaagataaaatgaagctactatagaaaatgaagaagaatg
acatggcagagtaaaatgagggaaaactaaaaagacaagttcagccagaa
aatcatacatgtaataaagtttaaactgtatcaaaatcaaatttacaaac
aaatatactgtatagactggcttatttaggttggattgctttgaaaagat
aatagccgtgaagaggtataataattgctgtctaaaaatgtagaagtgga
tgctcatagccatccattgcacaaagcataagggtctccaatgaaggagc
tagagaaagtacccaagagcttaaaggggtttgaatccctatagaggaac
atcaatatgacctaccagtaccttcagagttcactggactaaaccacatt
caaggaaaacccatggttggattcatgcttctagctggcatatgtagcag
atcatgtctgtgtcatcattgggaaggaagcccttggt

gaattcaaagtcacagataaagaaaaggaatgtaactgggaagttatctg
ctggttaatctttgatctacagatcaaagtgcccatgcaggcacacgctc
gcgcgcgtgcacacacacacacacacacacacacacacacacacaaacac
acaggaggtagggagaaaaagaaggtgaagatagagtgggctaggcaaat
taacaaagaatatcacattccaaatcactttgatattttataaagactaa
gctaagcaatcataaaaccaatttatcttctgaggactcctaggatgaaa
aatggcaggctaatacatattgatctgtggattaaaggtgttcaaatgtt
tgtgtggtgatacaagttactaaaaatatgtcagagatgttacaagaatt
actcagctcttctgttagtagagagtgcttcatgggtggcaatgagatgt
tcattttctaatgaaattgccagcctgtagtcatttactaggacaatacc
cagacttaattttggcactatctttcttggtgtgaatagaacacatttca
atgatctagacaaaaagattaagaaaacattttctggctcctagtttgat
tttccccattaatagcattaaaagactgcacattaagaagtccttacata
tctctggttgtcatgttttcctttgcatttattatttatttcttcactca
ttttatacagagtctttctttgtatcacaggatggcatcaaactcccaga
aatcctcagctgtggggtttcagttttgagccctttctaaagggctttaa
gcagttatactttctgtaacctactaactacactgttatggaaaatgcca
gcaacgtttctgggtagccctgctttagctgcctttagagagttttattt
gccatccgagctaacaattcctggctgaaaaaacaagattgtcaaataac
tggacttgttagattgctaaactgaaatgaaataggctccttagtgattc
ttgtatttaaaagattttatacagagcaaccatactatccttggaaataa
ataatatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_101587271_101588361
seq2: B6Ng01-171P08.b_50_1134 (reverse)

seq1  ACCAAGGGCCTCTCCTCCCATTGATGACCACCAGGCCATGATCTGCTACA  50
      ||||||||| || | ||||| |||||| |||   | ||||||||||||||
seq2  ACCAAGGGCTTC-CTTCCCAATGATGA-CAC--AGACATGATCTGCTACA  46

seq1  TATG-CAGCTAGAGCCATGAGTCCCACCATGGGTTTTCTTTGATTGGTGG  99
      |||| ||||||||  ||||| ||| ||||||||||||| |||| | ||||
seq2  TATGCCAGCTAGAAGCATGAATCCAACCATGGGTTTTCCTTGAAT-GTGG  95

seq1  TTTAGTCCCAGTGAACTCTGGAGGTACTGGTTAGTTCATATTGATGTTCC  149
      |||||| ||||||||||||| ||||||||| ||| |||||||||||||||
seq2  TTTAGT-CCAGTGAACTCTGAAGGTACTGG-TAGGTCATATTGATGTTCC  143

seq1  TCCTATAGGGATTCAAA-CCCTTTAAGCTCCTTGGGTACTTTCTCTAGCT  198
      | ||||||||||||||| ||||||||||| ||||||||||||||||||||
seq2  T-CTATAGGGATTCAAACCCCTTTAAGCT-CTTGGGTACTTTCTCTAGCT  191

seq1  CCTTCATTGGAGACCC-TATGCTTTGTGCAATGGATGGCTATGAGCATCC  247
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCTTCATTGGAGACCCTTATGCTTTGTGCAATGGATGGCTATGAGCATCC  241

seq1  ACTTCTACATTTTTAGACAGCAATTATTATACCTCTTCACGGCTATTATC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTACATTTTTAGACAGCAATTATTATACCTCTTCACGGCTATTATC  291

seq1  TTTTCAAAGCAATCCAACCTAAATAAGCCAGTCTATACAGTATATTTGTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAAGCAATCCAACCTAAATAAGCCAGTCTATACAGTATATTTGTT  341

seq1  TGTAAATTTGATTTTGATACAGTTTAAACTTTATTACATGTATGATTTTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATTTGATTTTGATACAGTTTAAACTTTATTACATGTATGATTTTC  391

seq1  TGGCTGAACTTGTCTTTTTAGTTTTCCCTCATTTTACTCTGCCATGTCAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGAACTTGTCTTTTTAGTTTTCCCTCATTTTACTCTGCCATGTCAT  441

seq1  TCTTCTTCATTTTCTATAGTAGCTTCATTTTATCTTTACATTGAATACAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCATTTTCTATAGTAGCTTCATTTTATCTTTACATTGAATACAC  491

seq1  TGTAAAAGTGCTATTTCTAGTTTATCATAGTTCTATCATATCTTTTTAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAGTGCTATTTCTAGTTTATCATAGTTCTATCATATCTTTTTAAT  541

seq1  CCAAACACATACAATCTATTGTCTGAGGGCCTGCTTGAGTTTTCTGGTTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACACATACAATCTATTGTCTGAGGGCCTGCTTGAGTTTTCTGGTTG  591

seq1  CCACGCACTCCAGTGAAATCTGCTTGACAGGCTGAGAAACCTAGAAGCAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGCACTCCAGTGAAATCTGCTTGACAGGCTGAGAAACCTAGAAGCAC  641

seq1  TCACGAGGCATAAAGAGGCATAAAGTTTCATGGAAACCCACCTCCTGGAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGAGGCATAAAGAGGCATAAAGTTTCATGGAAACCCACCTCCTGGAG  691

seq1  GTTTGGCGTTCTCATTAACCCATATACTCATACCCTATCCCTGCGTTAGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCGTTCTCATTAACCCATATACTCATACCCTATCCCTGCGTTAGT  741

seq1  CTGGTGTATGGATCCATGTGCTCTCTTTTAGTATTATCTTATTATAAGTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTATGGATCCATGTGCTCTCTTTTAGTATTATCTTATTATAAGTG  791

seq1  CCTTTTAAGATTGAATTCTGACATAGCCAGAGCCTTCATCAGTGTTCCAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAAGATTGAATTCTGACATAGCCAGAGCCTTCATCAGTGTTCCAA  841

seq1  GGTTCCAGAAGACCTTGGAATCAGGCAGGAATGCAGTAAGGAAGTTACCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCAGAAGACCTTGGAATCAGGCAGGAATGCAGTAAGGAAGTTACCT  891

seq1  ATTCAGTAACTAATTAAGCATTACAAAAGACAGAGCCAGCAGCTCAGACC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTAACTAATTAAGCATTACAAAAGACAGAGCCAGCAGCTCAGACC  941

seq1  TGGTCTGCAAAGTATTAACTAAGGACAGTAGCAAATCTCACCCAAACAAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGCAAAGTATTAACTAAGGACAGTAGCAAATCTCACCCAAACAAG  991

seq1  GGAATACCATAATAGACCTAGGGAATCCCACTGAGACAGGTATCTTCTCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATACCATAATAGACCTAGGGAATCCCACTGAGACAGGTATCTTCTCT  1041

seq1  ATAGTCAGGTATAGCAAGCTTCATATTAGAAACAAGTTGGTGAA  1091
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCAGGTATAGCAAGCTTCATATTAGAAACAAGTTGGTGAA  1085


seq1: chr7_101454477_101455547
seq2: B6Ng01-171P08.g_66_1125

seq1  GAATTCAAAGTCACAGATAAAGAAAAGGAATGTAACTGGGAAGTTATCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTCACAGATAAAGAAAAGGAATGTAACTGGGAAGTTATCTG  50

seq1  CTGGTTAATCTTTGATCTACAGATCAAAGTGCCCATGCAGGCACACGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTAATCTTTGATCTACAGATCAAAGTGCCCATGCAGGCACACGCTC  100

seq1  GCGCGCGTGCACACACACACACACACACACACACACACACACACAAACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCGCGTGCACACACACACACACACACACACACACACACACACAAACAC  150

seq1  ACAGGAGGTAGGGAGAAAAAGAAGGTGAAGATAGAGTGGGCTAGGCAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGGTAGGGAGAAAAAGAAGGTGAAGATAGAGTGGGCTAGGCAAAT  200

seq1  TAACAAAGAATATCACATTCCAAATCACTTTGATATTTTATAAAGACTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAGAATATCACATTCCAAATCACTTTGATATTTTATAAAGACTAA  250

seq1  GCTAAGCAATCATAAAACCAATTTATCTTCTGAGGACTCCTAGGATGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGCAATCATAAAACCAATTTATCTTCTGAGGACTCCTAGGATGAAA  300

seq1  AATGGCAGGCTAATACATATTGATCTGTGGATTAAAGGTGTTCAAATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAGGCTAATACATATTGATCTGTGGATTAAAGGTGTTCAAATGTT  350

seq1  TGTGTGGTGATACAAGTTACTAAAAATATGTCAGAGATGTTACAAGAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGTGATACAAGTTACTAAAAATATGTCAGAGATGTTACAAGAATT  400

seq1  ACTCAGCTCTTCTGTTAGTAGAGAGTGCTTCATGGGTGGCAATGAGATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCTCTTCTGTTAGTAGAGAGTGCTTCATGGGTGGCAATGAGATGT  450

seq1  TCATTTTCTAATGAAATTGCCAGCCTGTAGTCATTTACTAGGACAATACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCTAATGAAATTGCCAGCCTGTAGTCATTTACTAGGACAATACC  500

seq1  CAGACTTAATTTTGGCACTATCTTTCTTGGTGTGAATAGAACACATTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTAATTTTGGCACTATCTTTCTTGGTGTGAATAGAACACATTTCA  550

seq1  ATGATCTAGACAAAAAGATTAAGAAAACATTTTCTGGCTCCTAGTTTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTAGACAAAAAGATTAAGAAAACATTTTCTGGCTCCTAGTTTGAT  600

seq1  TTTCCCCATTAATAGCATTAAAAGACTGCACATTAAGAAGTCCTTACATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCATTAATAGCATTAAAAGACTGCACATTAAGAAGTCCTTACATA  650

seq1  TCTCTGGTTGTCATGTTTTCCTTTGCATTTATTATTTATTTCTTCACTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTTGTCATGTTTTCCTTTGCATTTATTATTTATTTCTTCACTCA  700

seq1  TTTTATACAGAGTCTTTCTTTGTATCACAGGATGGCATCAAACTCCCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATACAGAGTCTTTCTTTGTATCACAGGATGGCATCAAACTCCCAGA  750

seq1  AATCCTCAGCTGTGGGGTTTCAGTTTTGAGCCCTTTCTAAAGGGCTTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCAGCTGTGGGGTTTCAGTTTTGAGCCCTTTCTAAAGGGCTTTAA  800

seq1  GCAGTTATACTTTCTGTAACCTACTAACTACACTGTTATGGAAAATGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTATACTTTCTGTAACCTACTAACTACACTGTTATGGAAAATGCCA  850

seq1  GCAACG-TTCTTGGTAGCCCTGCTTTAGCTGCCTTTAGAGAGTTTTATTT  899
      |||||| |||| ||||||||||||||||||||||||||||||||||||||
seq2  GCAACGTTTCTGGGTAGCCCTGCTTTAGCTGCCTTTAGAGAGTTTTATTT  900

seq1  GCCATCCGAGCT-ACAATTCCTGGCTG-AAATACAAGATTGTCAAATAAC  947
      |||||||||||| |||||||||||||| ||| ||||||||||||||||||
seq2  GCCATCCGAGCTAACAATTCCTGGCTGAAAAAACAAGATTGTCAAATAAC  950

seq1  TGGAACTGTTAGATTGGCTAAAACTTGAAAATGAAATAAGGCT-CTTAGT  996
      ||||  ||||||||| ||| |||||   ||||||||| ||||| ||||||
seq2  TGGACTTGTTAGATT-GCT-AAACT--GAAATGAAAT-AGGCTCCTTAGT  995

seq1  GATTCTTGTAATTTTAAAAGAATTTTATTACCAAAGAGCAAAACAATACT  1046
      ||||||||||  |||||||| |||||||    | |||||  ||| |||||
seq2  GATTCTTGTA--TTTAAAAG-ATTTTAT----ACAGAGC--AACCATACT  1036

seq1  ATCTTTGAAAATAAAATAATATCTT  1071
      ||| ||| |||| ||||||||||||
seq2  ATCCTTGGAAAT-AAATAATATCTT  1060


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