BAC Information

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BAC

Clone NameB6Ng01-173F16
Chromosome7 (Build37)
Map Location 59,225,692 - 59,226,826
singlet/doubletsinglet
Overlap geneGas2
Upstream geneEG668770, EG668774, LOC668776, LOC434186, LOC546971, LOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608
Downstream gene1700015G11Rik, EG668783, EG620782, LOC100040692
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173F16.bB6Ng01-173F16.g
ACCGA001720GA001721
length1,1181,168
definitionB6Ng01-173F16.b B6Ng01-173F16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctctagagtatcaccaaactggcccaccatcattcaaacttct
gctctgctcccccagcctttggtgttgcttgagtttgtcctagttctagg
acacacatgcttcgacaccctctaaaagttctctcccgaaaacccaagat
acctataggattttgaaccttttttgtggaaggggttctgatgaatggtc
tatcctttggtcttagtcatctaaatacattagtatccataatgtgtcaa
gtctattgtaagtactccacaaattttgtcaagagaggtgatgagtgtag
ttcaactcagccaggcacctttactttctgtcttattttctctctgttca
tcttgggtttcctccagatggatctaagtgatctaaagtcaaggaactta
ttcagctccttacacaatggagatctctattgcctgcatactttaaccac
atgatgcaaacactggacattgttgttaaatgcaaaccctgatctttcct
tgtggctcagcacgtaacaacaactgcacccacaacagatctaaccctac
atatatcatcagggacatttatgaattttaggagtacatccttccttttc
attagctaatgtgttatacatgcccaagctaggctggactgatgcactgt
aaaatgtagccactactctgacctcttctagaatctataatgatataata
atcatgatgtatcaactataggagaacaacaaatgaggcaaccaggaaga
aaaccagatcaatttctgtccacgggtccagcatgatgtcagagtagaga
gaagagacattgcggtgaaggtcacatgttctcagtgctgagtgaaagcc
cctcatttggtaagcactgtgtaatacaaggtaaacctggatagtgatga
caggctgaagagagggagattttcaacatcctctttacttacagaacaac
atttccaggtgtcatagtcctactgtctctagttctgtagtctctaactt
tctacctttactacattttaaaggaaagtagatgggcatgtgacaaaggt
ctttctcatgtagcgatcgctgacttcacagtgatcccagtctctaggcg
gctatcagagagactcaa

gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagt
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgttgacaccattgcatatactagcagattttatcgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tggaaggagctagaagaaagtaccgaaggagctaaagggatcttcacccc
taataggtggaacaacatatgactaacagtacccctgagcctcttgactc
ttagctgcataatgtatcaaagaatgactagtcgcatcacttgcaaagga
agccattgacacgcaactttgtgtgcccgttacaggcacctcaaggcaag
gggggggtaattgctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_59225692_59226826
seq2: B6Ng01-173F16.b_36_1153 (reverse)

seq1  TTGAGTCTCTCTGATAGGCGGCTTAGAGGACTGGGGATCACTGGTTGGAG  50
      |||||||||||||||| || || |||| |||| ||||||||||    || 
seq2  TTGAGTCTCTCTGATA-GCCGCCTAGA-GACT-GGGATCACTG---TGAA  44

seq1  GTCAGCGATTTCGCTACATGAGGAAAGAACTTTTGTCACCATTGCCCATC  100
      ||||||||  ||||||||||| ||||| || ||||||||   ||||||||
seq2  GTCAGCGA--TCGCTACATGA-GAAAG-ACCTTTGTCAC--ATGCCCATC  88

seq1  TACTTTTCCTTTAAAATGTAGGTAAAGGTAGGAAAGTTAGAGACTACAGA  150
      ||| |||||||||||||||| ||||||||| |||||||||||||||||||
seq2  TAC-TTTCCTTTAAAATGTA-GTAAAGGTA-GAAAGTTAGAGACTACAGA  135

seq1  ACTAGGAGACAGTAGGAACTATGACACCTGGAAATGTTGTTCTGTAAGTA  200
      |||| ||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACTA-GAGACAGTAGG-ACTATGACACCTGGAAATGTTGTTCTGTAAGTA  183

seq1  AAGAGGATGTTGAAAATCTCCCTCTCTTCAGCCTGTCATCACTATCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGATGTTGAAAATCTCCCTCTCTTCAGCCTGTCATCACTATCCAGG  233

seq1  TTTACCTTGTATTACACAGTGCTTACCAAATGAGGGGCTTTCACTCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTTGTATTACACAGTGCTTACCAAATGAGGGGCTTTCACTCAGCA  283

seq1  CTGAGAACATGTGACCTTCACCGCAATGTCTCTTCTCTCTACTCTGACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAACATGTGACCTTCACCGCAATGTCTCTTCTCTCTACTCTGACAT  333

seq1  CATGCTGGACCCGTGGACAGAAATTGATCTGGTTTTCTTCCTGGTTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGGACCCGTGGACAGAAATTGATCTGGTTTTCTTCCTGGTTGCCT  383

seq1  CATTTGTTGTTCTCCTATAGTTGATACATCATGATTATTATATCATTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTTGTTCTCCTATAGTTGATACATCATGATTATTATATCATTATA  433

seq1  GATTCTAGAAGAGGTCAGAGTAGTGGCTACATTTTACAGTGCATCAGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTAGAAGAGGTCAGAGTAGTGGCTACATTTTACAGTGCATCAGTCC  483

seq1  AGCCTAGCTTGGGCATGTATAACACATTAGCTAATGAAAAGGAAGGATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGCTTGGGCATGTATAACACATTAGCTAATGAAAAGGAAGGATGT  533

seq1  ACTCCTAAAATTCATAAATGTCCCTGATGATATATGTAGGGTTAGATCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTAAAATTCATAAATGTCCCTGATGATATATGTAGGGTTAGATCTG  583

seq1  TTGTGGGTGCAGTTGTTGTTACGTGCTGAGCCACAAGGAAAGATCAGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGGTGCAGTTGTTGTTACGTGCTGAGCCACAAGGAAAGATCAGGGT  633

seq1  TTGCATTTAACAACAATGTCCAGTGTTTGCATCATGTGGTTAAAGTATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTAACAACAATGTCCAGTGTTTGCATCATGTGGTTAAAGTATGC  683

seq1  AGGCAATAGAGATCTCCATTGTGTAAGGAGCTGAATAAGTTCCTTGACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATAGAGATCTCCATTGTGTAAGGAGCTGAATAAGTTCCTTGACTT  733

seq1  TAGATCACTTAGATCCATCTGGAGGAAACCCAAGATGAACAGAGAGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCACTTAGATCCATCTGGAGGAAACCCAAGATGAACAGAGAGAAAA  783

seq1  TAAGACAGAAAGTAAAGGTGCCTGGCTGAGTTGAACTACACTCATCACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAGAAAGTAAAGGTGCCTGGCTGAGTTGAACTACACTCATCACCT  833

seq1  CTCTTGACAAAATTTGTGGAGTACTTACAATAGACTTGACACATTATGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGACAAAATTTGTGGAGTACTTACAATAGACTTGACACATTATGGA  883

seq1  TACTAATGTATTTAGATGACTAAGACCAAAGGATAGACCATTCATCAGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAATGTATTTAGATGACTAAGACCAAAGGATAGACCATTCATCAGAA  933

seq1  CCCCTTCCACAAAAAAGGTTCAAAATCCTATAGGTATCTTGGGTTTTCGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCCACAAAAAAGGTTCAAAATCCTATAGGTATCTTGGGTTTTCGG  983

seq1  GAGAGAACTTTTAGAGGGTGTCGAAGCATGTGTGTCCTAGAACTAGGACA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAACTTTTAGAGGGTGTCGAAGCATGTGTGTCCTAGAACTAGGACA  1033

seq1  AACTCAAGCAACACCAAAGGCTGGGGGAGCAGAGCAGAAGTTTGAATGAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAGCAACACCAAAGGCTGGGGGAGCAGAGCAGAAGTTTGAATGAT  1083

seq1  GGTGGGCCAGTTTGGTGATACTCTAGAGAGAATTC  1135
      |||||||||||||||||||||||||||||||||||
seq2  GGTGGGCCAGTTTGGTGATACTCTAGAGAGAATTC  1118


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