BAC Information

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BAC

Clone NameB6Ng01-173K18
Chromosome7 (Build37)14 (Build37)
Map Location 124,248,445 - 124,249,55063,200,022 - 63,200,285
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene1110004F10Rik, Plekha7, Rps13, Pik3c2a, LOC100042798, Nucb2, LOC100043320, EG668484, LOC668485, LOC546993, LOC100043330
Downstream geneXylt1, LOC669758, Rps15a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173K18.bB6Ng01-173K18.g
ACCGA001957GA001958
length1,108313
definitionB6Ng01-173K18.b B6Ng01-173K18.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(124,248,445 - 124,249,550)(63,200,022 - 63,200,285)
sequence
gaattctagggttttaggtttgcatgattacaccccagacccctagttgc
cttttggttttttgttgtcatttgtgggacaaatgttcactgtggagacc
tggctggcttggaacttgatacgtagaccaggctggcctcagtacaaaag
gtgggcccatactcaaaagaataaaatgcatgtatgcttactgctcagct
actgttcttcactttatgaaattctgaccagcatatgaaacaattccatc
cacttttaaggtgggcctttccaccacaactaacccagttgataaaaatc
tctcacagaaatatcctcaggctaactgaatctagacaatccctcactga
gaaccttgtcacagatgattctagattgtgtcaagttaacaattaaaact
aaccttcagagaaagtagatacaatcagcacagtggtaggaagccaagct
cacagaagtccgtgagctttaacacttcaaatgacagcaggactcctgtg
aacttggtggttggttgccacccgcttgttctctggaccctactattggc
agtgatgcagagcagacaagaggatcatctagtttatctaataaatcaaa
gcctgagttgaaatttgggaagctgagggtgggaagcttgggttgtgtcc
tttgggtgggaagcatccttgccaaagccagttttgattgctgcttcttt
tcatgggaggtggttccctctgggaactccctctgactgcctaaattcct
cactatggcaaagaaaatatatctgggtttttggagttgggctcattcga
aagctctgtgcatatcccccacactagcacttcaaatgcctaccaaagga
aaaccatgcttgtgagactctttgcaccctggggatctgtgggtataaaa
gaggatgaatcaagaaaggggctgtagattcaagtctttttttttttttt
aatgaaggatatacctcgtcccccccgtaataatagaacatgaatgaatt
attcagtgtgcgtttcctctttctgcatcaggcagctacaagtaaaggac
aactttgcccattccctcccgatcataaatgtacctccggtccttggacg
ccagagct
gaattcatctgggactgtcttagtttaagttctattgctgtgaagaggca
ccatgaccacagcaagtcttataaaggaaactatctaatttggagctggt
ttacagtttcagagttttagcctattatcatcatgacaagagacatggca
gtaagcagggagataaggtgctggacaaggagctgagagttctacatcct
cacctgtaggcagcagaaggagactgtgtgccacactggggatagcttaa
gcataggagacctcaaggccttgcccacagtgatacactccctccaacaa
ggccacacctcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_124248445_124249550
seq2: B6Ng01-173K18.b_43_1150

seq1  GAATTCTAGGGTTTTAGGTTTGCATGATTACACCCCAGACCCCTAGTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGGTTTTAGGTTTGCATGATTACACCCCAGACCCCTAGTTGC  50

seq1  CTTTTGGTTTTTTGTTGTCATTTGTGGGACAAATGTTCACTGTGGAGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGTTTTTTGTTGTCATTTGTGGGACAAATGTTCACTGTGGAGACC  100

seq1  TGGCTGGCTTGGAACTTGATACGTAGACCAGGCTGGCCTCAGTACAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGCTTGGAACTTGATACGTAGACCAGGCTGGCCTCAGTACAAAAG  150

seq1  GTGGGCCCATACTCAAAAGAATAAAATGCATGTATGCTTACTGCTCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCCCATACTCAAAAGAATAAAATGCATGTATGCTTACTGCTCAGCT  200

seq1  ACTGTTCTTCACTTTATGAAATTCTGACCAGCATATGAAACAATTCCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTCTTCACTTTATGAAATTCTGACCAGCATATGAAACAATTCCATC  250

seq1  CACTTTTAAGGTGGGCCTTTCCACCACAACTAACCCAGTTGATAAAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTAAGGTGGGCCTTTCCACCACAACTAACCCAGTTGATAAAAATC  300

seq1  TCTCACAGAAATATCCTCAGGCTAACTGAATCTAGACAATCCCTCACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACAGAAATATCCTCAGGCTAACTGAATCTAGACAATCCCTCACTGA  350

seq1  GAACCTTGTCACAGATGATTCTAGATTGTGTCAAGTTAACAATTAAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTGTCACAGATGATTCTAGATTGTGTCAAGTTAACAATTAAAACT  400

seq1  AACCTTCAGAGAAAGTAGATACAATCAGCACAGTGGTAGGAAGCCAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTCAGAGAAAGTAGATACAATCAGCACAGTGGTAGGAAGCCAAGCT  450

seq1  CACAGAAGTCCGTGAGCTTTAACACTTCAAATGACAGCAGGACTCCTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAGTCCGTGAGCTTTAACACTTCAAATGACAGCAGGACTCCTGTG  500

seq1  AACTTGGTGGTTGGTTGCCACCCGCTTGTTCTCTGGACCCTACTATTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGTGGTTGGTTGCCACCCGCTTGTTCTCTGGACCCTACTATTGGC  550

seq1  AGTGATGCAGAGCAGACAAGAGGATCATCTAGTTTATCTAATAAATCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGCAGAGCAGACAAGAGGATCATCTAGTTTATCTAATAAATCAAA  600

seq1  GCCTGAGTTGAAATTTGGGAAGCTGAGGGTGGGAAGCTTGGGTTGTGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGTTGAAATTTGGGAAGCTGAGGGTGGGAAGCTTGGGTTGTGTCC  650

seq1  TTTGGGTGGGAAGCATCCTTGCCAAAGCCAGTTTTGATTGCTGCTTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTGGGAAGCATCCTTGCCAAAGCCAGTTTTGATTGCTGCTTCTTT  700

seq1  TCATGGGAGGTGGTTCCCTCTGGGAACTCCCTCTGACTGCCTAAATTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGAGGTGGTTCCCTCTGGGAACTCCCTCTGACTGCCTAAATTCCT  750

seq1  CACTATGGCAAAGAAAATATATCTGGG-TTTTGGAGTTGGGCTCATTCGA  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CACTATGGCAAAGAAAATATATCTGGGTTTTTGGAGTTGGGCTCATTCGA  800

seq1  AAGCTCTGTGCATATCCCCCACACTAGCACTTCAAATGCCTACCCAAAGG  849
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAGCTCTGTGCATATCCCCCACACTAGCACTTCAAATGCCTA-CCAAAGG  849

seq1  AAAACCATGCTTGTGAGACTCTTTGCACCCTGGGGATCTGTGGGTAT-AA  898
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAACCATGCTTGTGAGACTCTTTGCACCCTGGGGATCTGTGGGTATAAA  899

seq1  AGAGGATGAATCAGGAAAGGGGCTGTAGATTCAAGTCTTTTTTTTTTTTT  948
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGAGGATGAATCAAGAAAGGGGCTGTAGATTCAAGTCTTTTTTTTTTTTT  949

seq1  TAATGAAGGATATACTCTGTCCCCACCGTGAATAGTAGGACATG-ATGAA  997
      |||||||||||||||   |||||| |||| |||| ||| ||||| |||||
seq2  TAATGAAGGATATACCTCGTCCCCCCCGT-AATAATAGAACATGAATGAA  998

seq1  TAATTCAGTG-GCGTTCTCTCTTTCTTGCATCAGGCAGCTCACAGTAAAG  1046
      | |||||||| |||||  ||||||| ||||||||||||||   |||||||
seq2  TTATTCAGTGTGCGTTTCCTCTTTC-TGCATCAGGCAGCTACAAGTAAAG  1047

seq1  GACAA-TTTCACTATT-CCTCCACATCAATAATGTTACCTCCGTCCTTTG  1094
      ||||| |||  | ||| |||||  ||||  |||| ||||||||  | |||
seq2  GACAACTTTGCCCATTCCCTCCCGATCATAAATG-TACCTCCGGTCCTTG  1096

seq1  GACGCCAGAGCT  1106
      ||||||||||||
seq2  GACGCCAGAGCT  1108

seq1: chr14_63200022_63200285
seq2: B6Ng01-173K18.g_100_383 (reverse)

seq1  AGGAGGTGTGGCCTTGCTGGAGGAAGTATGTTACTG-GGGTTGGGCTTTG  49
      |||||||||||||||| |||||| ||| | | |||| |||   ||| |||
seq2  AGGAGGTGTGGCCTTGTTGGAGGGAGTGTATCACTGTGGGCAAGGCCTTG  50

seq1  GGATTTCAAATGCTCACTCAAGCCAGGCCTACTGT----CACCCTCTCTT  95
       | | ||  |||    || |||| |  || | |||    |||  |||| |
seq2  AGGTCTCCTATG----CTTAAGCTATCCCCAGTGTGGCACACAGTCTCCT  96

seq1  CCTGCTGCC------TGCTGATAGAGAACTCTCAGCCACCTCTCCTGTAC  139
       ||||||||      ||  |||  ||||||||||||  | | ||| | ||
seq2  TCTGCTGCCTACAGGTGAGGATGTAGAACTCTCAGCTCCTTGTCCAGCAC  146

seq1  CATGTCTGCCTGTT---TGCCA---------CCATGATAGCAATGGGCTG  177
      | | ||| |||| |   |||||          ||||||   ||| |||| 
seq2  CTTATCTCCCTGCTTACTGCCATGTCTCTTGTCATGATGATAATAGGCTA  196

seq1  AACCTCTGAACCTGTAAGCCAG-TCCCAATTAAATGCTTCCCTTTATAAG  226
      || ||||||| |||||| |||| ||| ||||| ||  || ||||||||||
seq2  AAACTCTGAAACTGTAAACCAGCTCCAAATTAGATAGTTTCCTTTATAAG  246

seq1  AGTTGCTGTGGTCATGGTGTCTCTTCACAGCAATAGAA  264
      | ||||||||||||||||| ||||||||||||||||||
seq2  ACTTGCTGTGGTCATGGTGCCTCTTCACAGCAATAGAA  284