BAC Information

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BAC

Clone NameB6Ng01-173N15
Chromosome7 (Build37)
Map Location 34,520,106 - 34,521,280
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1, LOC668440
Downstream geneAbpz, LOC100043860, LOC627079, LOC635803, Abpg, LOC100043864, LOC100043865, Abpb, Abpa, LOC100043866, LOC100043867, LOC100043868, Wtip, Sae2, LOC100043410, Pdcd2l, Gpi1, 4931406P16Rik, EG619734, Lsm14a, LOC668460, LOC668464, Kctd15, Chst8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173N15.bB6Ng01-173N15.g
ACCGA002089GA002090
length1,1711,165
definitionB6Ng01-173N15.b B6Ng01-173N15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagaaatttgtaggccagctggcctggcagtccacaatgtcag
aatgccagagacctgtcttaaacaatgaatgaggattgtcctctgatctc
cttgcacacactgtggtatgtacatgcccactttccctcatacattcaac
cttacaaaagcagtcacacagctaaaagggagaggaatgacacacagtgt
aaattaaaatgatgaactccatcagttataagggacatatagcataatag
cacaactcttattctgtataatagtggcaaaaattgagaagactcattga
atagagaaagtgctggtgagcaggctgaaggactgaaagttatacaaaca
ggacacattggtcagtgtgtaagattggagccattgctttgttcatctgt
ttcctgatgtgacatgacaacatctaaggcttcctaaggaaaggtgggtg
atccttaggaaggtgaaatggcctccccagggacaaagctgtcacaggca
aactaatgactcctgagcaaatagaccatctgcaccctttaacacttgta
ctggttggttttgtgtgccaacttgacacaggctggagttatcacagaga
aaggagcttcagttggggaaatgcctccacaagatccagctgtaaggcat
tttctcaattagtgatcaagggggaaaggcaccttgtgggcggcaccatc
tctgggctggtattctgagcaagccagaggaagcaagccggtaagtaaca
ttcctccatggcctctgcatcagctcctgcttccttacctgattgaattc
cagtcctgcatcctttggtgatcaacagcaatgtggaaagtgtaagatga
ataaaccattttcctccccaacttgcttcttggtcatgatgtttgtgcag
gaatagaaaccctgactaagacaaacacccaagccagtattttttttaaa
cacaatttccaggaccagatatggtcctgaatctgaaatctgttggatta
ttcaaagagtaattcctagacttgttgctgtgcccatgggatgctaagca
aagggtgagctcttcttggtgttttctgtctccctgaccaacactggcct
ctcttacatatcctggtggtggcatgaacatgtgtgcttctcttaaggca
tgtacgttacatgatccttcg
gccttcatgtccccagatgcccacttctttgttctttgttaattgtccct
caacccctccctagccccttgctgtgtgcttaaaacctagcatttcaacc
taataaactgagaccttgacaggaatcttccttggtctccgcccttcttt
cttgttcatttgtttttcaggtttgtggtccccctcgcacacacgaaaac
tgtatccttctggacgggacaagtggtgcctcaacgtggagccaaggttt
ggatcatttacctttggtgaagattacgaagtttgactcccccagagaag
ttcgtcatgaccccaagaaaaaataagtagtgaaggaccactcccacagc
tcatgggagagagtagccctcggtaagtgattcatctccactaagaattg
ggagctaagcttaagaggcagccttcattaaaggcttaaagatgtctctc
agggaaagaggagttagagttaaaaagaaatatttgataaacttttttat
tttcatactccaggcatgtccatggtttattatagatggagcagagatac
actataaaaaatgctgaaaggtaggcagagatttaaatgatgaactagct
aatgagggtcctgatatggtccctgcaaccatcttttcttattagggagt
gtactggctagttttgtgtcaacttgacacagctggagttatcacagaga
aaggaacttcagttgaggaaatgcctccatgagatacaactgtaaggcat
ttcaagggtgaaaggccccttgtgggtgggaccatctctgggttggtagt
cttgggttctataagagagcaggctgagcatgccagtggaagcaagccag
taaggaacatccgtccatggcttctgcatcagctcctgcttttctgacct
gctgagttccagtcctgacttccttttggtgatgaacagcactatgggaa
tgtaagctgataaaccctttcctccccatcttgcttcttgtcatgatgtt
tgtgcagattagaaccctgactagacagggagtacttatcagagctacca
gtgttgccttcctctccctttctcttgcagaattcccagaaggatgagat
taagaatcagctgaaccgtagcgagataaggttccagaaaacgcagtatt
ctccagttatttgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_34520106_34521280
seq2: B6Ng01-173N15.b_48_1218 (reverse)

seq1  CGAAGGATCATAGTACGTACATGCCCTAAGAGAAGGCACACATG-TCATG  49
      |||||||||||   ||||||||||| |||||||| ||||||||| |||||
seq2  CGAAGGATCATGTAACGTACATGCCTTAAGAGAA-GCACACATGTTCATG  49

seq1  CCA-CACAGGGATATGTAAGAGAGGCCAGTGTTGGTCA-GGAGACAGAAA  97
      ||| |||  ||||||||||||||||||||||||||||| |||||||| ||
seq2  CCACCACCAGGATATGTAAGAGAGGCCAGTGTTGGTCAGGGAGACAG-AA  98

seq1  AACACAAGGAAGAGGCCTCACCCTTTGCTTAGGCATCCCATGGGCACAGC  147
      ||||| | ||||||  ||||||||||||||| ||||||||||||||||||
seq2  AACACCAAGAAGAG--CTCACCCTTTGCTTA-GCATCCCATGGGCACAGC  145

seq1  AAACAAGTCTAGGAATTTACTTCTTTGAATAATTCCAACAGATTTCAGAT  197
       |||||||||||||| |||| ||||||||||| |||||||||||||||||
seq2  -AACAAGTCTAGGAA-TTAC-TCTTTGAATAA-TCCAACAGATTTCAGAT  191

seq1  TCAGGACCATATCTGGTCCTGG-AATTGTGTTTTAAAAAAATACTGGCTT  246
      |||||||||||||||||||||| |||||||||| ||||||||||||||||
seq2  TCAGGACCATATCTGGTCCTGGAAATTGTGTTTAAAAAAAATACTGGCTT  241

seq1  GGGTGTTTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATGACCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATGACCA  291

seq1  AGAAGCAAGTTGGGGAGG-AAATGGTTTATTCATCTTACACTTTCCACAT  345
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGAAGCAAGTTGGGGAGGAAAATGGTTTATTCATCTTACACTTTCCACAT  341

seq1  TGCTGTTGATCACCAAAGGATGCAGGACTGGAATTCAATCAGGTAAGGAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTGATCACCAAAGGATGCAGGACTGGAATTCAATCAGGTAAGGAA  391

seq1  GCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTTACCGGCTTGCTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTTACCGGCTTGCTT  441

seq1  CCTCTGGCTTGCTCAGAATACCAGCCCAGAGATGGTGCCGCCCACAAGGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGCTTGCTCAGAATACCAGCCCAGAGATGGTGCCGCCCACAAGGT  491

seq1  GCCTTTCCCCCTTGATCACTAATTGAGAAAATGCCTTACAGCTGGATCTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCCCCCTTGATCACTAATTGAGAAAATGCCTTACAGCTGGATCTT  541

seq1  GTGGAGGCATTTCCCCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGGCATTTCCCCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCC  591

seq1  TGTGTCAAGTTGGCACACAAAACCAACCAGTACAAGTGTTAAAGGGTGCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAAGTTGGCACACAAAACCAACCAGTACAAGTGTTAAAGGGTGCA  641

seq1  GATGGTCTATTTGCTCAGGAGTCATTAGTTTGCCTGTGACAGCTTTGTCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTCTATTTGCTCAGGAGTCATTAGTTTGCCTGTGACAGCTTTGTCC  691

seq1  CTGGGGAGGCCATTTCACCTTCCTAAGGATCACCCACCTTTCCTTAGGAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGAGGCCATTTCACCTTCCTAAGGATCACCCACCTTTCCTTAGGAA  741

seq1  GCCTTAGATGTTGTCATGTCACATCAGGAAACAGATGAACAAAGCAATGG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAGATGTTGTCATGTCACATCAGGAAACAGATGAACAAAGCAATGG  791

seq1  CTCCAATCTTACACACTGACCAATGTGTCCTGTTTGTATAACTTTCAGTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAATCTTACACACTGACCAATGTGTCCTGTTTGTATAACTTTCAGTC  841

seq1  CTTCAGCCTGCTCACCAGCACTTTCTCTATTCAATGAGTCTTCTCAATTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCCTGCTCACCAGCACTTTCTCTATTCAATGAGTCTTCTCAATTT  891

seq1  TTGCCACTATTATACAGAATAAGAGTTGTGCTATTATGCTATATGTCCCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCACTATTATACAGAATAAGAGTTGTGCTATTATGCTATATGTCCCT  941

seq1  TATAACTGATGGAGTTCATCATTTTAATTTACACTGTGTGTCATTCCTCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTGATGGAGTTCATCATTTTAATTTACACTGTGTGTCATTCCTCT  991

seq1  CCCTTTTAGCTGTGTGACTGCTTTTGTAAGGTTGAATGTATGAGGGAAAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTAGCTGTGTGACTGCTTTTGTAAGGTTGAATGTATGAGGGAAAG  1041

seq1  TGGGCATGTACATACCACAGTGTGTGCAAGGAGATCAGAGGACAATCCTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATGTACATACCACAGTGTGTGCAAGGAGATCAGAGGACAATCCTC  1091

seq1  ATTCATTGTTTAAGACAGGTCTCTGGCATTCTGACATTGTGGACTGCCAG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTGTTTAAGACAGGTCTCTGGCATTCTGACATTGTGGACTGCCAG  1141

seq1  GCCAGCTGGCCTACAAATTTCTTGGAATTC  1175
      ||||||||||||||||||||||||||||||
seq2  GCCAGCTGGCCTACAAATTTCTTGGAATTC  1171