BAC Information

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BAC

Clone NameB6Ng01-173O14
Chromosome7 (Build37)
Map Location 50,847,391 - 50,848,438
singlet/doubletsinglet
Overlap geneZfp719
Upstream geneEG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301
Downstream gene4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3, Lrrc4b, 0610012D14Rik, Josd2, 2310044H10Rik, 1700021P22Rik, Mybpc2, Spib, Pold1, Nr1h2, Napsa, Kcnc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173O14.bB6Ng01-173O14.g
ACCGA002134GA002135
length9721,107
definitionB6Ng01-173O14.b B6Ng01-173O14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattcttttctctttgtacaaagctcaagtctaaatggatcaagg
aactccacataaaaccagagacaccgaaacttatagaggagaaagtgggg
aaaagcctcgaagatatgagcacagggaaaaaaatcctgaacagaacatc
aatggcttgtactgtaagatcgagaatcgacaaatgggacctcataaaat
tgcaaagcttctgtaaggcaaaagacactgccaataagacaaaaaggcca
ccaacagattgggaaagtatctttaccaatcctaaatcagataggggact
aatatccaatatataggaagaactcaagaagatggactccagaaaatcaa
ataaccccattaaagaatagagtacagagctaaaaaaaaaaaaaaaaaaa
aaaaaaaaagaattctcaagtgaggaataccgaaaggctgagaagcacct
gaaaaaatgttcaacatccttaatcatcagggaaatgcaaatcaaaacaa
ccctgagagtccacctcacaccagtcagaatggctaagatcaaaaattca
ggtgacagcagatgctggcgaggatgtggagaaagaggaacacttctcca
ttactggtgggattgcaagcttgtacaaccactctggaaatcagtctggc
ggttccttaaaactgttatttttaatctaaaaataatgaggataaaccac
agactcctggtcttatgaaagctaataaattactgtaagctatcaagggt
aactaagaaatgcaacttttatagtcacccaccttgtaaatgatcatacc
tttaatgtctttcagaaatgcatttgaagtcatgctaagacctaatgcaa
ttaattataggagaaagctttattttagctttctgttcatgctaatcaag
gtttaagcctaaaaacaaataaaaaacagcaaagtttgttcagctcagct
atacttaatagattatggtcct
gaattcactatatagaccagactggccttgaactcacagaattctgcctt
cctctacctcccaaggggttggattaaagatgtgcactagtatgcctggc
tggatagtaatatttttattttcattaatgaattactttacattctggtc
agaactttcccttctcaccttctttccctctttcctcctccttccttttc
tccttagaaaaggggaggcctccaatggatatcaacccaccttggcctat
caagttgcagtaggacaaggtgcatcatcttctattgaggctagacaagg
cagttcagttaggggaaaggggcccaaaggcaggcaactgaatcagagag
ctcctgttcctattgaaagcggttccacatgaataccaaactgcatatct
gttatatgtaggatgcctaggtccttcccatgcatgctctcttggtggtg
gttgagtctcagtgagcccctggctcaggttagttaattttgtagacttt
cttatagtgcccttgacttctctgactcctccagttcttcctccccctct
tctacaagatgatactaatatttttaaactttccttgtttctgtctatga
agggacagattgtgttgggcttgtccctaccatggtggccaacagacata
gcagctattttgacttcctaggcctctcaccagatttttttaccagtctc
ggattcctggacatcatcacctcagggtgccatttgagagagagatagaa
acccagaatattcatgaactggtacctgtgtctccacagtccgtttgtgc
tgctgtgattcatgttcttccagaacctcggaagatgtcctcatagaaat
ggctttcttttgtaaaagtaactaggctgtaggcaaaccttggccagggg
ttggtccttaatctgcttagtgatatgaattaaagccatgtgaaacctca
aaaaatttggaaggcaggatcatcaaggcagagattttggtgatatacct
ccagccatggaatgtgatgactgttagcaacagaaacttaaaaggaaaat
aaaaaccagaccaacatattttctccttgggtgttccagatgaggccatc
ccttcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_50847391_50848438
seq2: B6Ng01-173O14.g_132_1177

seq1  CAAGGGGTTGGATTAAAGATGTGCACTAGTATGCCTGGCTGGATAGTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGGTTGGATTAAAGATGTGCACTAGTATGCCTGGCTGGATAGTAAT  50

seq1  ATTTTTATTTTCATTAATGAATTACTTTACATTCTGGTCAGAACTTTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTTTCATTAATGAATTACTTTACATTCTGGTCAGAACTTTCCC  100

seq1  TTCTCACCTTCTTTCCCTCTTTCCTCCTCCTTCCTTTTCTCCTTAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACCTTCTTTCCCTCTTTCCTCCTCCTTCCTTTTCTCCTTAGAAAA  150

seq1  GGGGAGGCCTCCAATGGATATCAACCCACCTTGGCCTATCAAGTTGCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGCCTCCAATGGATATCAACCCACCTTGGCCTATCAAGTTGCAGT  200

seq1  AGGACAAGGTGCATCATCTTCTATTGAGGCTAGACAAGGCAGTTCAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAAGGTGCATCATCTTCTATTGAGGCTAGACAAGGCAGTTCAGTTA  250

seq1  GGGGAAAGGGGCCCAAAGGCAGGCAACTGAATCAGAGAGCTCCTGTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAGGGGCCCAAAGGCAGGCAACTGAATCAGAGAGCTCCTGTTCCT  300

seq1  ATTGAAAGCGGTTCCACATGAATACCAAACTGCATATCTGTTATATGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAGCGGTTCCACATGAATACCAAACTGCATATCTGTTATATGTAG  350

seq1  GATGCCTAGGTCCTTCCCATGCATGCTCTCTTGGTGGTGGTTGAGTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCTAGGTCCTTCCCATGCATGCTCTCTTGGTGGTGGTTGAGTCTCA  400

seq1  GTGAGCCCCTGGCTCAGGTTAGTTAATTTTGTAGACTTTCTTATAGTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCCCTGGCTCAGGTTAGTTAATTTTGTAGACTTTCTTATAGTGCC  450

seq1  CTTGACTTCTCTGACTCCTCCAGTTCTTCCTCCCCCTCTTCTACAAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTTCTCTGACTCCTCCAGTTCTTCCTCCCCCTCTTCTACAAGATG  500

seq1  ATACTAATATTTTTAAACTTTCCTTGTTTCTGTCTATGAAGGGACAGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAATATTTTTAAACTTTCCTTGTTTCTGTCTATGAAGGGACAGATT  550

seq1  GTGTTGGGCTTGTCCCTACCATGGTGGCCAACAGACATAGCAGCTATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGGGCTTGTCCCTACCATGGTGGCCAACAGACATAGCAGCTATTTT  600

seq1  GACTTCCTAGGCCTCTCACCAGATTTTTTTACCAGTCTCGGATTCCTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCTAGGCCTCTCACCAGATTTTTTTACCAGTCTCGGATTCCTGGA  650

seq1  CATCATCACCTCAGGGTGCCATTTGAGAGAGAGATAGAAACCCAGAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCACCTCAGGGTGCCATTTGAGAGAGAGATAGAAACCCAGAATAT  700

seq1  TCATGAACTGGTACCTGTGTCTCCACAGTCCGTTTGTGCTGCTGTGATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAACTGGTACCTGTGTCTCCACAGTCCGTTTGTGCTGCTGTGATTC  750

seq1  ATGTTCTTCCAGAACCTCGGAAGATGTCCTCATAGAAATGGCTT--CTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||   |||
seq2  ATGTTCTTCCAGAACCTCGGAAGATGTCCTCATAGAAATGGCTTTCTTTT  800

seq1  GTAAAAGTAACTAGGCTGTAGGCAAA-CTTGGCCA-GGGTTGGTCCTAAA  846
      |||||||||||||||||||||||||| |||||||| ||||||||||| ||
seq2  GTAAAAGTAACTAGGCTGTAGGCAAACCTTGGCCAGGGGTTGGTCCTTAA  850

seq1  TCTGCTTAGTGATATG-ATTAAAGCCATGTGAAA-CTCAAAAAATTTGGA  894
      |||||||||||||||| ||||||||||||||||| |||||||||||||||
seq2  TCTGCTTAGTGATATGAATTAAAGCCATGTGAAACCTCAAAAAATTTGGA  900

seq1  AGGCAGGATCATCAAGGCAGAGATTTTGGTGATATACCTCCAAGCCATGG  944
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGGCAGGATCATCAAGGCAGAGATTTTGGTGATATACCTCC-AGCCATGG  949

seq1  AATGTTGATGACTGTTAGCAACAGAAACTAAAAAAGAAAAAAAAAAAACA  994
      |||| |||||||||||||||||||||||| |||| |  |||| |||||| 
seq2  AATG-TGATGACTGTTAGCAACAGAAACTTAAAAGG--AAAATAAAAACC  996

seq1  AAACAAAACAATATTTTCTTCCTTGGGTGTTTCCAAAATGA-GCCATCCC  1043
      | || ||   |||||||| ||||||||||||  | | |||| ||||||||
seq2  AGACCAA--CATATTTTC-TCCTTGGGTGTT--CCAGATGAGGCCATCCC  1041

seq1  TTCAC  1048
      |||||
seq2  TTCAC  1046