BAC Information

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BAC

Clone NameB6Ng01-174C14
Chromosome7 (Build37)
Map Location 89,862,366 - 90,050,292
singlet/doubletdoublet
Overlap geneEftud1, LOC100038986, LOC619808, Rkhd3
Upstream gene2610204K14Rik, 3110040N11Rik, Btbd1, Tm6sf1, LOC100043161, Hdgfrp3, Bnc1, Sh3gl3, Adamtsl3, 1700129I04Rik
Downstream geneLOC619909, A530021J07Rik, EG666160, Tmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174C14.bB6Ng01-174C14.g
ACCGA002318GA002319
length878300
definitionB6Ng01-174C14.b B6Ng01-174C14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,862,366 - 89,863,233)(90,049,993 - 90,050,292)
sequence
gaattcattcttaagcacctggtggcctttaatgtagttgcatttttttc
agactctggcatttgtgtgagcccttttcctgtattgacagagcctctcc
ctaatccctacctttctatagacttgagattctacatggagagacttgga
ggaggtaggatataaaccatcttttgtagggggcgagggggatgtatgca
cacatgtggattggtgatccagtgcacatatacacagaccagaggctata
gtgtctcctgttctttctttctctctccttatttatgcctgacgctgagt
ctctcactgaacctgggcttggactggtagccagcaagcctcctgtcccc
agcccacacagtgctagttacgggtgcatgtgccaccatgaccagctttt
atgtggattctgaggttttaaactcagatccataggtttgtatatacctg
ctgacatctcctcagtcttagatcattcttggcatttagtcacttaaaaa
aatatttttaaatcctctttttcaagttaaattctgaaaacacaagcatt
tgtgacttactgttggacaccagtcgtggggaaatgaaggagatgggaga
gatgaccctcatcccaacagatgtccggggctctgagtgggtggacggac
acagggctctccatgcacacgggtaggcgtcttgctatgggaagccacgg
gagcagtctggggtccctgggccttgtggagcccagggacaaccatgttc
tagctcttgggcattgcaggaggtcactgggacgctgctgaaatagctaa
gtaacaggtgggagcccagagccttcagtctgctcctggggcttgaaatg
gaaaaggggtaaggggagaaatgcaaga
ttgacctacccccttcatgtcactggtggagtggacacaggtgaagatgt
ctttctttgaagccttcctttcagtggagtgaagcttgagggtcggacat
tgctttaagtctcattcagaagcttaaaacatcagctactgatagccttg
acattctttcaaaacttaacagcttccccattcagtcccatactctaagc
tctttcttgggtataattctcaagcctgttttttgttttgttttgttttg
ttttgttttgttatgttatgttttgttgggatttttttgtttggtggtgg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_89862366_89863233
seq2: B6Ng01-174C14.b_44_921

seq1  GAATTCATTCTTAAGCACCTGGTGGCCTTTAATGTAGTTGCATTTTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTTAAGCACCTGGTGGCCTTTAATGTAGTTGCATTTTTTTC  50

seq1  AGACTCTGGCATTTGTGTGAGCCCTTTTCCTGTATTGACAGAGCCTCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTGGCATTTGTGTGAGCCCTTTTCCTGTATTGACAGAGCCTCTCC  100

seq1  CTAATCCCTACCTTTCTATAGACTTGAGATTCTACATGGAGAGACTTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCCCTACCTTTCTATAGACTTGAGATTCTACATGGAGAGACTTGGA  150

seq1  GGAGGTAGGATATAAACCATCTTTTGTAGGGGGCGAGGGGGATGTATGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTAGGATATAAACCATCTTTTGTAGGGGGCGAGGGGGATGTATGCA  200

seq1  CACATGTGGATTGGTGATCCAGTGCACATATACACAGACCAGAGGCTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTGGATTGGTGATCCAGTGCACATATACACAGACCAGAGGCTATA  250

seq1  GTGTCTCCTGTTCTTTCTTTCTCTCTCCTTATTTATGCCTGACGCTGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCCTGTTCTTTCTTTCTCTCTCCTTATTTATGCCTGACGCTGAGT  300

seq1  CTCTCACTGAACCTGGGCTTGGACTGGTAGCCAGCAAGCCTCCTGTCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACTGAACCTGGGCTTGGACTGGTAGCCAGCAAGCCTCCTGTCCCC  350

seq1  AGCCCACACAGTGCTAGTTACGGGTGCATGTGCCACCATGACCAGCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCACACAGTGCTAGTTACGGGTGCATGTGCCACCATGACCAGCTTTT  400

seq1  ATGTGGATTCTGAGGTTTTAAACTCAGATCCATAGGTTTGTATATACCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGATTCTGAGGTTTTAAACTCAGATCCATAGGTTTGTATATACCTG  450

seq1  CTGACATCTCCTCAGTCTTAGATCATTCTTGGCATTTAGTCACTTAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATCTCCTCAGTCTTAGATCATTCTTGGCATTTAGTCACTTAAAAA  500

seq1  AATATTTTTAAATCCTCTTTTTCAAGTTAAATTCTGAAAACACAAGCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTAAATCCTCTTTTTCAAGTTAAATTCTGAAAACACAAGCATT  550

seq1  TGTGACTTACTGTTGGACACCAGTCGTGGGGAAATGAAGGAGATGGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTTACTGTTGGACACCAGTCGTGGGGAAATGAAGGAGATGGGAGA  600

seq1  GATGACCCTCATCCCAACAGATGTCCGGGGCTCTGAGTGGGTGGACGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACCCTCATCCCAACAGATGTCCGGGGCTCTGAGTGGGTGGACGGAC  650

seq1  ACAGGGCTCTCCATGCACACGGGTAGGCGTCTTGCTATGGGAAGCCAC-G  699
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACAGGGCTCTCCATGCACACGGGTAGGCGTCTTGCTATGGGAAGCCACGG  700

seq1  GAGCAGTCTGGGGTCCCTGGGCCTTGTGGAGCCCAGGGACAA-CAGGTTC  748
      |||||||||||||||||||||||||||||||||||||||||| || ||||
seq2  GAGCAGTCTGGGGTCCCTGGGCCTTGTGGAGCCCAGGGACAACCATGTTC  750

seq1  TAGCTCTTGGGCATTGCAGGAGGTCACT-GGACGCTGCTGAAA-AGCTAA  796
      |||||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  TAGCTCTTGGGCATTGCAGGAGGTCACTGGGACGCTGCTGAAATAGCTAA  800

seq1  G-AACAGGTGGGAGCCCAGAGCC-TCAGTCTGC-CCTGGGGC-TGAAA-G  841
      | ||||||||||||||||||||| ||||||||| |||||||| ||||| |
seq2  GTAACAGGTGGGAGCCCAGAGCCTTCAGTCTGCTCCTGGGGCTTGAAATG  850

seq1  GAAAAGGGGTAGGGGGAG-AAGGCAAGA  868
      ||||||||||| |||||| || ||||||
seq2  GAAAAGGGGTAAGGGGAGAAATGCAAGA  878

seq1: chr7_90049993_90050292
seq2: B6Ng01-174C14.g_77_376 (reverse)

seq1  CCACCACCAAACAAAAAAATCCCAACAAAACATAACATAACAAAACAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCAAACAAAAAAATCCCAACAAAACATAACATAACAAAACAAAA  50

seq1  CAAAACAAAACAAAACAAAAAACAGGCTTGAGAATTATACCCAAGAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAAACAAAACAAAAAACAGGCTTGAGAATTATACCCAAGAAAGA  100

seq1  GCTTAGAGTATGGGACTGAATGGGGAAGCTGTTAAGTTTTGAAAGAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGAGTATGGGACTGAATGGGGAAGCTGTTAAGTTTTGAAAGAATGT  150

seq1  CAAGGCTATCAGTAGCTGATGTTTTAAGCTTCTGAATGAGACTTAAAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTATCAGTAGCTGATGTTTTAAGCTTCTGAATGAGACTTAAAGCA  200

seq1  ATGTCCGACCCTCAAGCTTCACTCCACTGAAAGGAAGGCTTCAAAGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCGACCCTCAAGCTTCACTCCACTGAAAGGAAGGCTTCAAAGAAAG  250

seq1  ACATCTTCACCTGTGTCCACTCCACCAGTGACATGAAGGGGGTAGGTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTCACCTGTGTCCACTCCACCAGTGACATGAAGGGGGTAGGTCAA  300