BAC Information

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BAC

Clone NameB6Ng01-174I07
Chromosome7 (Build37)
Map Location 95,456,125 - 95,598,710
singlet/doubletdoublet
Overlap geneCtsc, LOC100039756, Rab38
Upstream geneNox4, Tyr, Grm5
Downstream geneLOC100039924, LOC666598, EG621562, Tmem135, LOC100039969, Fzd4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174I07.bB6Ng01-174I07.g
ACCGA002577GA002578
length1,0321,148
definitionB6Ng01-174I07.b B6Ng01-174I07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,456,125 - 95,457,157)(95,597,565 - 95,598,710)
sequence
gaattcctttggcccttgccaataggtccaggagtatcttttataggaca
ctcctcccacctcttagcactagagcttggaatttcaacatgacttttgg
gtgagctcaagcagtctactgtattagagattacttttttttttttttta
aatttaactcacaagggtcccaccacatttctctcaccctgacgtctgaa
agtatcacagacataaatgcattcttccttgtcatggagaacctaggggt
cagtgcttattaagtaagtcttctatactgtactgagttttatgacaaat
gttaattataaatcctgtattaaggtgtctcactcagattttcatctgtt
tgtgaaattttaaataaatactatgcatatttttttctttatctacagaa
tcttgtggaagctgctactcatttgcctctatgggtatgctagaagcaag
aattcgtatattaaccaacaattctcagacaccaatcctgagtcctcagg
aggttgtatcttgcagcccctatgcccaaggtaagtattttatttcagag
ctgtattatgaactctttatttggttgtatatcagcaaatatcactagca
aaagtaaaggtgtagcatagcagagaagagctatgtctgtagtctgtccc
catcagtgatcagtggacagtttctcaggaaatctactgcatctcacagc
aagatgtcagcacatcatgggaatactgcctctcttacagtgtcaactaa
gagtgtacaaaactgtacaaacaaagcagacatagaccttattcaaaagc
agaaaataaatataagcaaattttatcttaggaaaatgatacagctttaa
agtatttatagcttcaggttccaaacattctcttttcaccacccagttcc
tactaaaattaatagtaatatttattctttaagagaatttacactttgta
cttaggcctttggacatctccgaacagctatactgaaagcctcaatagga
tttagagaaatactatttcaaaatctaccatt
gaattcaaaccctataactaccatggtaaaaggagaagcctgattacttc
aacttgtcttctgaactgcacaaataaatgtgctatagtatacgtgcttg
tgtatttgtgtgtgcacatgaatggacacaaaataagaaaataaatgcga
aagatgaaatatttactgagaaaatgtgtagcatacaatattttataact
ctgcttatttagtacctcaataagtgtatatggatatttacattaagtta
attaaaacaataaaatttaaaattcaatctgtaagtcatagtagttagct
acatttcaaatgttaaattacatgtggccttctttggaattcagggtaag
gtgacatattaggagctgtgtctgtgagactagcagaaaaatatttatgt
taaaaatagattctattcttataaaagaaagagctatgcaaaacagacat
aatacttggtaaagtgttgcccacaaagcaatagccaggccatcactgca
gcctaggcacactgcccataccctggaaaatcaagctgtagttgcctcgg
aagcagattcccagacaaccaacaatataagaccaggtttcagaaaccca
accagaggtcggagagcacagccagcttcagaagtcaaagtgtgcctgcc
atagctgtttgaagtggagaggaactccaaatgcacacacctgttcctgc
ccattagtttgagtgagcaactatactcacaggaagtttgaagcagaact
tagtatggactgctgacggtacaaccaggcttcaagcagaacagactgga
aagagcatccaaagtagggaaaatgaagctcaaaacttctcaaggatcct
caaccgatacccctgccactgcctagaggagctacagaatgtgatatggg
tatcagacagactccaataaaaagtaaacatgggtttcttcctgtaagta
gtcaggaggtgacctggtgaagatgggttcgccactctcttgacccagaa
aaccccccacaaatcatgcaaatcagaggttcaaactttcttgcttactt
tagaacacttcggaaactgccagtcatcaagggttatacattaagcaacc
accaaggattctgaagatgtcacttcaaagaggcaaatgtgttgccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_95456125_95457157
seq2: B6Ng01-174I07.b_48_1079

seq1  GAATTCCTTTGGCCCTTGCCAATAGGTCCAGGAGTATCTTTTATAGGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGGCCCTTGCCAATAGGTCCAGGAGTATCTTTTATAGGACA  50

seq1  CTCCTCCCACCTCTTAGCACTAGAGCTTGGAATTTCAACATGACTTTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCACCTCTTAGCACTAGAGCTTGGAATTTCAACATGACTTTTGG  100

seq1  GTGAGCTCAAGCAGTCTACTGTATTAGAGATTACTTTTTTTTTTTTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTCAAGCAGTCTACTGTATTAGAGATTACTTTTTTTTTTTTTTTA  150

seq1  AATTTAACTCACAAGGGTCCCACCACATTTCTCTCACCCTGACGTCTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAACTCACAAGGGTCCCACCACATTTCTCTCACCCTGACGTCTGAA  200

seq1  AGTATCACAGACATAAATGCATTCTTCCTTGTCATGGAGAACCTAGGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCACAGACATAAATGCATTCTTCCTTGTCATGGAGAACCTAGGGGT  250

seq1  CAGTGCTTATTAAGTAAGTCTTCTATACTGTACTGAGTTTTATGACAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTTATTAAGTAAGTCTTCTATACTGTACTGAGTTTTATGACAAAT  300

seq1  GTTAATTATAAATCCTGTATTAAGGTGTCTCACTCAGATTTTCATCTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTATAAATCCTGTATTAAGGTGTCTCACTCAGATTTTCATCTGTT  350

seq1  TGTGAAATTTTAAATAAATACTATGCATATTTTTTTCTTTATCTACAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAATTTTAAATAAATACTATGCATATTTTTTTCTTTATCTACAGAA  400

seq1  TCTTGTGGAAGCTGCTACTCATTTGCCTCTATGGGTATGCTAGAAGCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGGAAGCTGCTACTCATTTGCCTCTATGGGTATGCTAGAAGCAAG  450

seq1  AATTCGTATATTAACCAACAATTCTCAGACACCAATCCTGAGTCCTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCGTATATTAACCAACAATTCTCAGACACCAATCCTGAGTCCTCAGG  500

seq1  AGGTTGTATCTTGCAGCCCCTATGCCCAAGGTAAGTATTTTATTTCAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTATCTTGCAGCCCCTATGCCCAAGGTAAGTATTTTATTTCAGAG  550

seq1  CTGTATTATGAACTCTTTATTTGGTTGTATATCAGCAAATATCACTAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTATGAACTCTTTATTTGGTTGTATATCAGCAAATATCACTAGCA  600

seq1  AAAGTAAAGGTGTAGCATAGCAGAGAAGAGCTATGTCTGTAGTCTGTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAAGGTGTAGCATAGCAGAGAAGAGCTATGTCTGTAGTCTGTCCC  650

seq1  CATCAGTGATCAGTGGACAGTTTCTCAGGAAATCTACTGCATCTCACAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTGATCAGTGGACAGTTTCTCAGGAAATCTACTGCATCTCACAGC  700

seq1  AAGATGTCAGCACATCATGGGAATACTGCCTCTCTTACAGTGTCAACTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTCAGCACATCATGGGAATACTGCCTCTCTTACAGTGTCAACTAA  750

seq1  GAGTGTACAAAACTGTACAAACAAAGCAGACATAGACCTTATTCAAAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTACAAAACTGTACAAACAAAGCAGACATAGACCTTATTCAAAAGC  800

seq1  AGAAAATAAATATAAGCAAA-TTTATCTTAGGAAAATGATACAGCTTTAA  849
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGAAAATAAATATAAGCAAATTTTATCTTAGGAAAATGATACAGCTTTAA  850

seq1  AGTA-TTATAGCTTCAGGTTCCAAACA-TCTCTTTTCACAACCCAGTTCC  897
      |||| |||||||||||||||||||||| ||||||||||| ||||||||||
seq2  AGTATTTATAGCTTCAGGTTCCAAACATTCTCTTTTCACCACCCAGTTCC  900

seq1  TACTAAAATTAATAGTAATATTTATTCTTTTAAGAGAATTTAACACTTTG  947
      ||||||||||||||||||||||||||| ||||||||||||| ||||||||
seq2  TACTAAAATTAATAGTAATATTTATTC-TTTAAGAGAATTT-ACACTTTG  948

seq1  TACTTA-GCCTTTGTACACTTCAGAACAGGCTATACTGAAGGCTCAAATA  996
      |||||| ||||||| |||  || ||||| ||||||||||| ||   ||||
seq2  TACTTAGGCCTTTGGACATCTCCGAACA-GCTATACTGAAAGCCTCAATA  997

seq1  GGATTTAGAGGAAATACTATTTTAAAATACTACCATT  1033
      ||||||||| |||||||||||| ||||| ||||||||
seq2  GGATTTAGA-GAAATACTATTTCAAAAT-CTACCATT  1032

seq1: chr7_95597565_95598710
seq2: B6Ng01-174I07.g_67_1214 (reverse)

seq1  GTGGC-ACACA-TTGCTTCTTTAAAGTGACATCCTTCAG-ATACTTGGTG  47
      ||||| ||||| |||| ||||| ||||||||| |||||| || |||||||
seq2  GTGGCAACACATTTGCCTCTTTGAAGTGACAT-CTTCAGAATCCTTGGTG  49

seq1  GTTTTGCTTATATGTAT-ACCCTTGATGACCTGGGCAGTTTTCCGAGTGT  96
      |  ||||||| |||||| ||||||||||||   |||||||| |  |||||
seq2  G--TTGCTTA-ATGTATAACCCTTGATGAC--TGGCAGTTTCCGAAGTGT  94

seq1  TCTTAAAGTAAGCAAGAAGGTTTGAACCTCTTGATTTGCATGATTTTGTG  146
      || ||||||||||||||| ||||||||||| |||||||||||| ||||||
seq2  TC-TAAAGTAAGCAAGAAAGTTTGAACCTC-TGATTTGCATGA-TTTGTG  141

seq1  GGGGG-TTTCTGGGTCAAGAGAGTGGCGAA-CCATCTTCA-CAGGTCACC  193
      ||||| |||||||||||||||||||||||| ||||||||| |||||||||
seq2  GGGGGTTTTCTGGGTCAAGAGAGTGGCGAACCCATCTTCACCAGGTCACC  191

seq1  T-CTGACTACTTACAGGAAG-AACCCATGTTTACTTTTTA-TGGAGTCTG  240
      | |||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  TCCTGACTACTTACAGGAAGAAACCCATGTTTACTTTTTATTGGAGTCTG  241

seq1  TCTGAATACCATATCACATTCTGTAGCTCCTCTAGGCAGTGGCAGGGGTA  290
      |||||   ||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATACCCATATCACATTCTGTAGCTCCTCTAGGCAGTGGCAGGGGTA  291

seq1  TCGGTTGAGGATCCTTGAGAAGTTTTGAGCTTCATTTTCCCTACTTTGGA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTTGAGGATCCTTGAGAAGTTTTGAGCTTCATTTTCCCTACTTTGGA  341

seq1  TGCTCTTTCCAGTCTGTTCTGCTTGAAGCCTGGTTGTACCGTCAGCAGTC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTTCCAGTCTGTTCTGCTTGAAGCCTGGTTGTACCGTCAGCAGTC  391

seq1  CATACTAAGTTCTGCTTCAAACTTCCTGTGAGTATAGTTGCTCACTC-AA  439
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CATACTAAGTTCTGCTTCAAACTTCCTGTGAGTATAGTTGCTCACTCAAA  441

seq1  CTAATGGGCAGGAACAGGTGTGTGCATTTGGAGTTCCTCTCCACTTCAAA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGGGCAGGAACAGGTGTGTGCATTTGGAGTTCCTCTCCACTTCAAA  491

seq1  CAGCTATGGCAGGCACACTTTGACTTCTGAAGCTGGCTGTGCTCTCCGAC  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTATGGCAGGCACACTTTGACTTCTGAAGCTGGCTGTGCTCTCCGAC  541

seq1  CTCTGGTTGGGTTTCTGAAACCTGGTCTTATATTGTTGGTTGTCTGGGAA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTTGGGTTTCTGAAACCTGGTCTTATATTGTTGGTTGTCTGGGAA  591

seq1  TCTGCTTCCGAGGCAACTACAGCTTGATTTTCCAGGGTATGGGCAGTGTG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCCGAGGCAACTACAGCTTGATTTTCCAGGGTATGGGCAGTGTG  641

seq1  CCTAGGCTGCAGTGATGGCCTGGCTATTGCTTTGTGGGCAACACTTTACC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGCTGCAGTGATGGCCTGGCTATTGCTTTGTGGGCAACACTTTACC  691

seq1  AAGTATTATGTCTGTTTTGCATAGCTCTTTCTTTTATAAGAATAGAATCT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTATGTCTGTTTTGCATAGCTCTTTCTTTTATAAGAATAGAATCT  741

seq1  ATTTTTAACATAAATATTTTTCTGCTAGTCTCACAGACACAGCTCCTAAT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAACATAAATATTTTTCTGCTAGTCTCACAGACACAGCTCCTAAT  791

seq1  ATGTCACCTTACCCTGAATTCCAAAGAAGGCCACATGTAATTTAACATTT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACCTTACCCTGAATTCCAAAGAAGGCCACATGTAATTTAACATTT  841

seq1  GAAATGTAGCTAACTACTATGACTTACAGATTGAATTTTAAATTTTATTG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTAGCTAACTACTATGACTTACAGATTGAATTTTAAATTTTATTG  891

seq1  TTTTAATTAACTTAATGTAAATATCCATATACACTTATTGAGGTACTAAA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTAACTTAATGTAAATATCCATATACACTTATTGAGGTACTAAA  941

seq1  TAAGCAGAGTTATAAAATATTGTATGCTACACATTTTCTCAGTAAATATT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGAGTTATAAAATATTGTATGCTACACATTTTCTCAGTAAATATT  991

seq1  TCATCTTTCGCATTTATTTTCTTATTTTGTGTCCATTCATGTGCACACAC  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTTCGCATTTATTTTCTTATTTTGTGTCCATTCATGTGCACACAC  1041

seq1  AAATACACAAGCACGTATACTATAGCACATTTATTTGTGCAGTTCAGAAG  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACACAAGCACGTATACTATAGCACATTTATTTGTGCAGTTCAGAAG  1091

seq1  ACAAGTTGAAGTAATCAGGCTTCTCCTTTTACCATGGTAGTTATAGGGTT  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTGAAGTAATCAGGCTTCTCCTTTTACCATGGTAGTTATAGGGTT  1141

seq1  TGAATTC  1146
      |||||||
seq2  TGAATTC  1148