BAC Information

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BAC

Clone NameB6Ng01-174M07
Chromosome8 (Build37)7 (Build37)
Map Location 103,253,961 - 103,254,7157,122,806 - 7,122,882
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100042069, LOC436054, LOC100042078, LOC100042086, LOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174M07.bB6Ng01-174M07.g
ACCGA002753GA002754
length759731
definitionB6Ng01-174M07.b B6Ng01-174M07.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(103,253,961 - 103,254,715)(7,122,806 - 7,122,882)
sequence
gaattctattctaatagtcataagtgcaaatatgttaatccataaaatta
aatctcacataataatttttattatgtaactgtatattttatgaaagagg
tatggcattgaatctacattaaagttttttatatagtcaattaacaagac
atctaattttttttagactgtgattaaaatgtattcataaccaacatgtg
gcaaactcacacaggcacctggtaataattatgttaataatattcttgtt
ctgaactgccaataaagaagcatgcaataccaggctaattgctctgttct
ctacatgattgtccacaggatattacacaaagaaagttcatttaaagtca
cttcagttatagtatcatctctataaaccataaatacttccaatgagtat
gtactattttcatagtgacaggatcctataataggggttaatattttcag
agtagttaccttttcctttgagacatggtttctcaagctgatcttgtact
aattatgttgttagtacatttccctctgaactgtttttatttttcctgcc
cagttctcactatgtttgacatccgtgtgccaccatagcttcatgtaaaa
ttttatgtcagacctgtggtaaatgctttacgaaaaataaattggttttg
catcagtaaataccacattttatttgatgtagatatccccctgtatgtta
tatgtgattgaactttgttccaacaattttaattaacatgcccaatttca
cataacttg

gaattctctatttagttctattccccatgtttaattcagttatttgagtt
gttggattatgtctttttgagtgctttgttaatttttgatattagctttt
tcagatgtaggatggatgacaatcttttgcaatctgtgggctgccaattt
gccctattgacagtgtcctttgccttacagaagcattgcagtttcacgag
gtcttatttatcaatcattgatcttaaagcctgagccattggtgtactgt
tcaggaacttgtctcctgtaccaatgcattcaagaatatttccccctttt
tctctacatgagatttagtgtatccagatttatattgaggtccttgatcc
actttgacttgattttaaggtgataattatggatctattcttttagtctc
tgatccatcattgtccctgcatttactttagacaggataaatttggggtc
aaaagtttatacatgggttgcgtatagaaaatgtggtttatttacacaat
gtaatattattcagctattaaaaactaggacatcatgaattttcgaagca
aaagaactctaaaatattaacatgattgaagtaacccagacacaagagga
catgcatggaatccttataagaaggaggaaaaaatagtcataggtaggag
agagagagagagagagagagagagagagagagagagagaatgagacagag
acaaagaccgagacaaagacagagacagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_103253961_103254715
seq2: B6Ng01-174M07.b_46_804

seq1  GAATTCTATTCTAATAGTCATAAGTGCAAATATGTTAATCCATAAAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTCTAATAGTCATAAGTGCAAATATGTTAATCCATAAAATTA  50

seq1  AATCTCACATAATAATTTTTATTATGTAACTGTATATTTTATGAAAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCACATAATAATTTTTATTATGTAACTGTATATTTTATGAAAGAGG  100

seq1  TATGGCATTGAATCTACATTAAAGTTTTTTATATAGTCAATTAACAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCATTGAATCTACATTAAAGTTTTTTATATAGTCAATTAACAAGAC  150

seq1  ATCTAATTTTTTTTAGACTGTGATTAAAATGTATTCATAACCAACATGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATTTTTTTTAGACTGTGATTAAAATGTATTCATAACCAACATGTG  200

seq1  GCAAACTCACACAGGCACCTGGTAATAATTATGTTAATAATATTCTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTCACACAGGCACCTGGTAATAATTATGTTAATAATATTCTTGTT  250

seq1  CTGAACTGCCAATAAAGAAGCATGCAATACCAGGCTAATTGCTCTGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTGCCAATAAAGAAGCATGCAATACCAGGCTAATTGCTCTGTTCT  300

seq1  CTACATGATTGTCCACAGGATATTACACAAAGAAAGTTCATTTAAAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGATTGTCCACAGGATATTACACAAAGAAAGTTCATTTAAAGTCA  350

seq1  CTTCAGTTATAGTATCATCTCTATAAACCATAAATACTTCCAATGAGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTTATAGTATCATCTCTATAAACCATAAATACTTCCAATGAGTAT  400

seq1  GTACTATTTTCATAGTGACAGGATCCTATAATAGGGGTTAATATTTTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATTTTCATAGTGACAGGATCCTATAATAGGGGTTAATATTTTCAG  450

seq1  AGTAGTTACCTTTTCCTTTGAGACATGGTTTCTCAAGCTGATCTTGTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTACCTTTTCCTTTGAGACATGGTTTCTCAAGCTGATCTTGTACT  500

seq1  AATTATGTTGTTAGTACATTTCCCTCTGAACTGTTTTTATTTTTCCTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGTTGTTAGTACATTTCCCTCTGAACTGTTTTTATTTTTCCTGCC  550

seq1  CAGTTCTCACTATG-TTGACATCCGTGTGCCACCATAGCTTCATGTAAAA  599
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAGTTCTCACTATGTTTGACATCCGTGTGCCACCATAGCTTCATGTAAAA  600

seq1  TTTTATGTCAGACCTGTGGTAAATGCTTTACG-AAAATAAATTGGTTTTG  648
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTTATGTCAGACCTGTGGTAAATGCTTTACGAAAAATAAATTGGTTTTG  650

seq1  CATCAGTAAATACCACA-TTTATTTGATGTAGATAT-CCCCTGTATGTTA  696
      ||||||||||||||||| |||||||||||||||||| |||||||||||||
seq2  CATCAGTAAATACCACATTTTATTTGATGTAGATATCCCCCTGTATGTTA  700

seq1  TATGTGATTGAACTTTGTTCCAGCAATTTTAATTAACATGCCCAATTTCA  746
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TATGTGATTGAACTTTGTTCCAACAATTTTAATTAACATGCCCAATTTCA  750

seq1  CATAACTTG  755
      |||||||||
seq2  CATAACTTG  759


seq1: chr7_7122806_7122882
seq2: B6Ng01-174M07.g_746_800 (reverse)

seq1  TCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTTCTCTTCAC  50
      ||||||||||||||| |||||| |||| ||||||||||||          
seq2  TCTCTGTCTCTGTCTTTGTCTCGGTCTTTGTCTCTGTCTC----------  40

seq1  TTCTTCCCTTGAATTCTCTCTCTCTCT  77
                  |||||||||||||||
seq2  ------------ATTCTCTCTCTCTCT  55


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