BAC Information

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BAC

Clone NameB6Ng01-177C01
Chromosome7 (Build37)
Map Location 144,384,388 - 144,385,276
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546009, EG621677, EG668771, Mgmt, EG621804
Downstream geneEbf3, 9430038I01Rik, Txnl2, LOC435235
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177C01.b
ACCGA004485
length893
definitionB6Ng01-177C01.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcccctcagtcggcatatttccgaggtggctgtgatgccaca
cgtgccatccataagatttggtgtctactcccttgggcctgactgtttct
gtcaccaccactgggccacatcaccactggggtgccctgtaaatgatcct
gaagttggaggcggctaggtagtaggcttctgatttggatggcgggatat
tgcttgctctggctcccccaatcctctcttgtccctgctttctacatcct
cacggacttcttggcaatttccagatcccggatgactatggggcttgaat
atttaacctcacacaatggcccatggggtgataaaaaggatgcctgttct
gctgtgtgtcactaaggtgtcttgcactgcccactggtggctactggtag
atgatggtcaaggctgggactccagtgacgttgacattctccatgaacac
aggttctaatttccacagcccttgcctgccttccgtatctcattcgattc
cgctcatcacgctgcagtttctcctcaatggctggcaggctttacatgtt
ttggcttgcatctctgtcacccgttcagatactgtgatctaaattagact
cacaaatgtcatcttaattacttgttctgctgagcaaaacaagaaacaat
tattcaaaacatactgaaacttgtgaatacctttccctccaatctctgct
cagcctgtgttggcgacccttagagagacatccaagaaacaagaatccta
tgacacaaagcccacttctcgccttcctgagtcagtacaaggcaaggcat
gggcttgcccaaaaactctgctcaagtctttggagctagtgtgataggat
tctgttggacgtgtctaaaaccaagtttcaaaagcttgcgttt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_144384388_144385276
seq2: B6Ng01-177C01.b_36_928 (reverse)

seq1  AAACGCAAGCTTTTG-AACTTCTTTCTGTCCAGGT-CAACAG-ACCCTAT  47
      ||||||||||||||| |||||  || |   || || |||||| | |||||
seq2  AAACGCAAGCTTTTGAAACTTGGTTTTAGACACGTCCAACAGAATCCTAT  50

seq1  CACACTAGCTCCAAAGACCTGAGCAGAGTTCTTTGGGCAA-CCCGTTCCT  96
      |||||||||||||||||| ||||||||||| ||||||||| ||| | |||
seq2  CACACTAGCTCCAAAGACTTGAGCAGAGTT-TTTGGGCAAGCCCATGCCT  99

seq1  TGGCCCTG--GTGACTCAGGAAGGCCTGAAGTGGGCTTTGTGCCATAGGA  144
      | ||| ||   ||||||||||||||  ||||||||||||||| |||||||
seq2  T-GCCTTGTACTGACTCAGGAAGGCGAGAAGTGGGCTTTGTGTCATAGGA  148

seq1  -ACCTGTTTCTTTACTGTCTCTTTAAGGCCCGCCAACAAAGGCTCAGCAC  193
        | ||||||||   ||||||| |||||  |||||||| ||||| |||| 
seq2  TTCTTGTTTCTTGGATGTCTCTCTAAGGGTCGCCAACACAGGCTGAGCAG  198

seq1  TGACTGGAGGGAAAGGTATTCACAAGTTTCATTCTGTTTTGAATAATTGT  243
       || ||||||||||||||||||||||||||| | ||||||||||||||||
seq2  AGATTGGAGGGAAAGGTATTCACAAGTTTCAGTATGTTTTGAATAATTGT  248

seq1  TTCCTGTTTTGCTCAGCAGAACAAGTAATTAAGATGACATTTGTGAGTAC  293
      ||| |||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTCTTGTTTTGCTCAGCAGAACAAGTAATTAAGATGACATTTGTGAGT-C  297

seq1  TAATTTAGATCACACTTACTGAACGGGTGACAAAACTGCAAGCCAAAACA  343
      |||||||||||||| |  |||||||||||||| |  ||||||||||||||
seq2  TAATTTAGATCACAGTATCTGAACGGGTGACAGAGATGCAAGCCAAAACA  347

seq1  TGTAAAGCCTGCCTGCCATTGAGGAGAAACTGCAGCGTGCTGAGCGGAAT  393
      ||||||||||||| ||||||||||||||||||||||||| ||||||||||
seq2  TGTAAAGCCTGCCAGCCATTGAGGAGAAACTGCAGCGTGATGAGCGGAAT  397

seq1  CGAATGAGATACAGAAGGCAGGCAAGGGCTGTGGAAATTAGAACCTGTGT  443
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CGAATGAGATACGGAAGGCAGGCAAGGGCTGTGGAAATTAGAACCTGTGT  447

seq1  TCATGGAGAATGTCAACGTCACTGGAGTCCCAGCCTTGACCATCATCTAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCATGGAGAATGTCAACGTCACTGGAGTCCCAGCCTTGACCATCATCTAC  497

seq1  GTGTAGCCACCAGTGGCCAGTGCAAGACACCTTAGTGACACACAACACTA  543
        |||||||||||||| ||||||||||||||||||||||||||| ||  |
seq2  CAGTAGCCACCAGTGGGCAGTGCAAGACACCTTAGTGACACACAGCAGAA  547

seq1  CAGGCATCCTTTTTATCACCCCATGGGCCATTGTGTCTGGCTAAATCTCC  593
      ||||||||||||||||||||||||||||||||||||  || ||||| | |
seq2  CAGGCATCCTTTTTATCACCCCATGGGCCATTGTGTGAGGTTAAATATTC  597

seq1  AAGCCCCATAGTCATCCCTGATCTGGTTCTTGCCAAAAAGTCCATGAGGA  643
      |||||||||||||||||  |||||||   ||||||| |||||| ||||||
seq2  AAGCCCCATAGTCATCCGGGATCTGGAAATTGCCAAGAAGTCCGTGAGGA  647

seq1  TGTAGAAAGCAGGGACAAGAGAGTATTGGGGGAGCCAGAGCAAGCACTAT  693
      ||||||||||||||||||||||| |||||||||||||||||||||| |||
seq2  TGTAGAAAGCAGGGACAAGAGAGGATTGGGGGAGCCAGAGCAAGCAATAT  697

seq1  CCCGCCATCCAAATCAGAAGCCTACTACCTAGCCGCCTCCAACTTCAGGA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCCATCCAAATCAGAAGCCTACTACCTAGCCGCCTCCAACTTCAGGA  747

seq1  TCATTTACAGGGCACCCCAGTGCTGCTGTGACCCAGTGGTGGTGACAGAA  793
      |||||||||||||||||||||| || |||| |||||||||||||||||||
seq2  TCATTTACAGGGCACCCCAGTGGTGATGTGGCCCAGTGGTGGTGACAGAA  797

seq1  ACAGTCAGGCCCAAGCGTGTAGACACCAAATCTTCT-GATGGCACCTGTG  842
      ||||||||||||||| | |||||||||||||||| | |||||||| ||||
seq2  ACAGTCAGGCCCAAGGGAGTAGACACCAAATCTTATGGATGGCACGTGTG  847

seq1  GCATCACAGCCACCTCGGAACTATGCTGACTGAGGGGATGAGAATTC  889
      |||||||||||||||||||| ||||| ||||||||||| ||||||||
seq2  GCATCACAGCCACCTCGGAAATATGCCGACTGAGGGGA-GAGAATTC  893