BAC Information

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BAC

Clone NameB6Ng01-177N22
Chromosome7 (Build37)
Map Location 111,705,048 - 111,705,565
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651
Downstream geneOlfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177N22.bB6Ng01-177N22.g
ACCGA005022GA005023
length512696
definitionB6Ng01-177N22.b B6Ng01-177N22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tttgtttagctctgaaccccatttttaatggggttatttgaatttctgga
gtccagcttcttgagctctaaaaataaagaagaaggaaagaaaagaagca
aaatgttagcaaatccagttaagtacagtgtgtagcacagaagcatctgg
aggttggaggagaactctctttccaccatggttcccagggattaaaacca
ggcactcaggctagaggttgggtaccaaacagaaccactgagtcatctct
ttggcccaagtttcataatttttcactgtggtctaataaagcagccatca
acagagtctcttgggagctgcctaaggagcaatgaaaatgacacatactc
tcccagtctaatgtcattccagactcactccctaccgctcactcccaggg
ggtgcttcttgtgttcattgaggctaaatatgaatgattttatttccact
gcagattttagattgcatcctcagatgttttgtgtttgttgaattgttgg
atggttggttgg
gaattctgtagggctgtgaatgggcttctctgagagtagtgtttgcccat
tatggagcctagtggtggaccctcagcactgtacaaaatcaggtgtggtg
gctcttgcacgtggtctgtcttagttactcttctactgctgtgataaaca
ccatgactgggacaaattgtaaggaaagtgtttcatttggggctcacagt
agtgttcatgaccaccactgtgtggtgcatggcagcaggcagggagacag
ggtgctggagcaggaagtaagaagtcacaacttgagacacaatcttgaca
caaacttgagacagagagagaatggtggtggtggtcggaatctactgaat
cctgaaagcttgcacctattccataccttctccaagaatgccccactctt
ttttttttaattcttttttaaaattttttcctttttttttatttcgtatt
ttcctcaattacatttccaatgctatcccaaaagtctcccacaccccccc
ccccactcccctacccacccattcccattttttggccctgtagttcccct
gtactggggcatataatctttcctgaacagtgtccctgataactgagaac
caagtgtccaaaaatcttagcctttggggccatttgttattcaaactggc
ccaggatgccactgcccttgcagcctggctgcatgaaggatcagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111705048_111705565
seq2: B6Ng01-177N22.b_49_566 (reverse)

seq1  CCAACCAACCATCCAACAATTCAACAAACACAAAACATCTGAGGATGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAACCATCCAACAATTCAACAAACACAAAACATCTGAGGATGCAA  50

seq1  TCTAAAATCTGCAGTGGAAATAAAATCATTCATATTTAGCCTCAATGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAATCTGCAGTGGAAATAAAATCATTCATATTTAGCCTCAATGAAC  100

seq1  ACAAGAAGCACCCCCTGGGAGTGAGCGGTAGGGAGTGAGTCTGGAATGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAGCACCCCCTGGGAGTGAGCGGTAGGGAGTGAGTCTGGAATGAC  150

seq1  ATTAGACTGGGAGAGTATGTGTCATTTTCATTGCTCCTTAGGCAGCTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGACTGGGAGAGTATGTGTCATTTTCATTGCTCCTTAGGCAGCTCCC  200

seq1  AAGAGACTCTGTTGATGGCTGCTTTATTAGACCACAGTGAAAAATTATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACTCTGTTGATGGCTGCTTTATTAGACCACAGTGAAAAATTATGA  250

seq1  AACTTGGGCCAAAGAGATGACTCAGTGGTTCTGTTTGGTACCCAACCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGGCCAAAGAGATGACTCAGTGGTTCTGTTTGGTACCCAACCTCT  300

seq1  AGCCTGAGTGCCTGGTTTTAATCCCTGGGAACCATGGTGGAAAGAGAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGAGTGCCTGGTTTTAATCCCTGGGAACCATGGTGGAAAGAGAGTT  350

seq1  CTCCTCCAACCTCCAGATGCTTCTGTGCTACACACTGTACTTAACTGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCAACCTCCAGATGCTTCTGTGCTACACACTGTACTTAACTGGAT  400

seq1  TTGCTAACATTTTGCTTCTTTTCTTTCCTTCTTCTTTATTTTTAGAGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAACATTTTGCTTCTTTTCTTTCCTTCTTCTTTATTTTTAGAGCTC  450

seq1  AAGAAGCTGGACTCCAGAAATTCAAATAACCCCATTAAAAATGGGGTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTGGACTCCAGAAATTCAAATAACCCCATTAAAAATGGGGTTCA  500

seq1  GAGCTAAACAAAGAATTC  518
      ||||||||||||||||||
seq2  GAGCTAAACAAAGAATTC  518