BAC Information

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BAC

Clone NameB6Ng01-178D08
Chromosome7 (Build37)
Map Location 134,465,090 - 134,653,907
singlet/doubletdoublet
Overlap geneItgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1
Upstream geneLat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2
Downstream gene1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178D08.bB6Ng01-178D08.g
ACCGA005265GA005266
length8371,052
definitionB6Ng01-178D08.b B6Ng01-178D08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,653,256 - 134,653,907)(134,465,090 - 134,466,135)
sequence
gaattctacccagaagtaatcagtgttgagtcccctatatctaaatgata
ccatagtatgaattgtttcacacttttgcttacactttggcaatttataa
ttgttttacattttgccttttcagacttataatatctagaaagattaata
aagatagtgatggggccagatgtggtggcacctctcattcctgcacccag
caggcattagcagggaaaatctctgaattcaagtccaggctggtttacat
agtgagaccctatctttttatgtcccgtccccacccctccacttgtccct
gtatgtcccctcctcaccccaccaaaagaaagaaagaaggtagtggaaga
aagatgactcagcagttaagagtactggctgagccaggcgtagtggtgca
cacctttaatcccagtacttggtaggcagaggcaggtggatttctgagtt
cgaggccagcctggtctacaaagtgagttccaggatagccagagctatac
agagaaaccctgtctcggaaaaaaaaaaaaaaaaaaaaaaaagtactggc
tggctcaggctagaggacctgactttagtttctgggaccaacaaggcagc
tggcaaacatcttgcctctgcactgcacacattgcacaggcagagatttg
ccactaagcctgatgtgaatttgatgcctgaaactcaaaaagtagaagga
gaataaacggtctctatttcagttggtagagtgtttccctaacatttgtg
aaaccttgggttcaattcttagtgtcattttaaacagatgtgcttagcat
agagctataaatgtgggcatacagcatcattctggga
gaattcctaggagctggagagcaggcctaggaggatggggaggtgggcag
aggcaaaccacagaaaaagggcaggcaggggaggccagatgttgaacagc
caagagctcctgccaagggtggaactgtaggttgctttgtctcagtccag
atacccattgtgtagctgtcactagagaaggaccatgtacctggacctgt
atgggtaagggtgtagaaagaccacagccattccagctgagcccagagtc
tctcttgtgccatcacaagacctcctcactcacctgagcaccccgtcttc
actcctccatgctcaacagggcagggccatgcagcctatcctgagacctt
caatccacacagtgactaaggaggtaagaggagagagagaggcagaccgg
tgggcctggggaccctgtctggctattctgggtccggggcctaagcctcc
ttcctggctccttcttgacctttcagatcccttttgagaagaactgtggt
gaagataagaagtgtgaggcaaacctgaccctgtcatcccctgccaggtc
tgtaagcctttgtcccttgacacctgcccacctggctccagtttaattcc
atctttcctgcccacctggccccagtttaattccatcttccctccgtaac
taccaagtatattgagacagtgtcaaacggcccttcaccagtgggctgtg
tccactaggaggggcacttccttctctgacaaaggcagtcattagcagag
tctgcgctggggtcactggggtcgttgttaggactctgagctgatcactg
taactgttgtttgtggttggcctgctccctcatctctgaagtcttcacct
cgatgctgtttcctgctgtcatggccccatgattctgatcacctcccaac
cccagattctggaacccctgcgtctgatgtcctctgcccacccttgcttg
tgcagtgacactgagcaactcatgggaagatgcctactggttgcgattgg
acctggactctcctcggggactctctctttccggcaagtgaagatgcctt
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134653256_134653907
seq2: B6Ng01-178D08.b_42_693 (reverse)

seq1  GGCAAATCTCTGCCTGTGCAATGTGTGCAGTGCAGAGGCAAGATGTTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATCTCTGCCTGTGCAATGTGTGCAGTGCAGAGGCAAGATGTTTGC  50

seq1  CAGCTGCCTTGTTGGTCCCAGAAACTAAAGTCAGGTCCTCTAGCCTGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCCTTGTTGGTCCCAGAAACTAAAGTCAGGTCCTCTAGCCTGAGC  100

seq1  CAGCCAGTACTTTTTTTTTTTTTTTTTTTTTTTTCCGAGACAGGGTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGTACTTTTTTTTTTTTTTTTTTTTTTTTCCGAGACAGGGTTTCT  150

seq1  CTGTATAGCTCTGGCTATCCTGGAACTCACTTTGTAGACCAGGCTGGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATAGCTCTGGCTATCCTGGAACTCACTTTGTAGACCAGGCTGGCCT  200

seq1  CGAACTCAGAAATCCACCTGCCTCTGCCTACCAAGTACTGGGATTAAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACTCAGAAATCCACCTGCCTCTGCCTACCAAGTACTGGGATTAAAGG  250

seq1  TGTGCACCACTACGCCTGGCTCAGCCAGTACTCTTAACTGCTGAGTCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACCACTACGCCTGGCTCAGCCAGTACTCTTAACTGCTGAGTCATC  300

seq1  TTTCTTCCACTACCTTCTTTCTTTCTTTTGGTGGGGTGAGGAGGGGACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCACTACCTTCTTTCTTTCTTTTGGTGGGGTGAGGAGGGGACAT  350

seq1  ACAGGGACAAGTGGAGGGGTGGGGACGGGACATAAAAAGATAGGGTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGACAAGTGGAGGGGTGGGGACGGGACATAAAAAGATAGGGTCTCA  400

seq1  CTATGTAAACCAGCCTGGACTTGAATTCAGAGATTTTCCCTGCTAATGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTAAACCAGCCTGGACTTGAATTCAGAGATTTTCCCTGCTAATGCC  450

seq1  TGCTGGGTGCAGGAATGAGAGGTGCCACCACATCTGGCCCCATCACTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGTGCAGGAATGAGAGGTGCCACCACATCTGGCCCCATCACTATC  500

seq1  TTTATTAATCTTTCTAGATATTATAAGTCTGAAAAGGCAAAATGTAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAATCTTTCTAGATATTATAAGTCTGAAAAGGCAAAATGTAAAAC  550

seq1  AATTATAAATTGCCAAAGTGTAAGCAAAAGTGTGAAACAATTCATACTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAAATTGCCAAAGTGTAAGCAAAAGTGTGAAACAATTCATACTAT  600

seq1  GGTATCATTTAGATATAGGGGACTCAACACTGATTACTTCTGGGTAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCATTTAGATATAGGGGACTCAACACTGATTACTTCTGGGTAGAAT  650

seq1  TC  652
      ||
seq2  TC  652

seq1: chr7_134465090_134466135
seq2: B6Ng01-178D08.g_68_1119

seq1  GAATTCCTAGGAGCTGGAGAGCAGGCCTAGGAGGATGGGGAGGTGGGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGGAGCTGGAGAGCAGGCCTAGGAGGATGGGGAGGTGGGCAG  50

seq1  AGGCAAACCACAGAAAAAGGGCAGGCAGGGGAGGCCAGATGTTGAACAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAACCACAGAAAAAGGGCAGGCAGGGGAGGCCAGATGTTGAACAGC  100

seq1  CAAGAGCTCCTGCCAAGGGTGGAACTGTAGGTTGCTTTGTCTCAGTCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGCTCCTGCCAAGGGTGGAACTGTAGGTTGCTTTGTCTCAGTCCAG  150

seq1  ATACCCATTGTGTAGCTGTCACTAGAGAAGGACCATGTACCTGGACCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCATTGTGTAGCTGTCACTAGAGAAGGACCATGTACCTGGACCTGT  200

seq1  ATGGGTAAGGGTGTAGAAAGACCACAGCCATTCCAGCTGAGCCCAGAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTAAGGGTGTAGAAAGACCACAGCCATTCCAGCTGAGCCCAGAGTC  250

seq1  TCTCTTGTGCCATCACAAGACCTCCTCACTCACCTGAGCACCCCGTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGTGCCATCACAAGACCTCCTCACTCACCTGAGCACCCCGTCTTC  300

seq1  ACTCCTCCATGCTCAACAGGGCAGGGCCATGCAGCCTATCCTGAGACCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCCATGCTCAACAGGGCAGGGCCATGCAGCCTATCCTGAGACCTT  350

seq1  CAATCCACACAGTGACTAAGGAGGTAAGAGGAGAGAGAGAGGCAGACCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCACACAGTGACTAAGGAGGTAAGAGGAGAGAGAGAGGCAGACCGG  400

seq1  TGGGCCTGGGGACCCTGTCTGGCTATTCTGGGTCCGGGGCCTAAGCCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTGGGGACCCTGTCTGGCTATTCTGGGTCCGGGGCCTAAGCCTCC  450

seq1  TTCCTGGCTCCTTCTTGACCTTTCAGATCCCTTTTGAGAAGAACTGTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGCTCCTTCTTGACCTTTCAGATCCCTTTTGAGAAGAACTGTGGT  500

seq1  GAAGATAAGAAGTGTGAGGCAAACCTGACCCTGTCATCCCCTGCCAGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATAAGAAGTGTGAGGCAAACCTGACCCTGTCATCCCCTGCCAGGTC  550

seq1  TGTAAGCCTTTGTCCCTTGACACCTGCCCACCTGGCTCCAGTTTAATTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCCTTTGTCCCTTGACACCTGCCCACCTGGCTCCAGTTTAATTCC  600

seq1  ATCTTTCCTGCCCACCTGGCCCCAGTTTAATTCCATCTTCCCTCCGTAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCCTGCCCACCTGGCCCCAGTTTAATTCCATCTTCCCTCCGTAAC  650

seq1  TACCAAGTATATTGAGACAGTGTCAAACGGCCCTTCACCAGTGGGCTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAGTATATTGAGACAGTGTCAAACGGCCCTTCACCAGTGGGCTGTG  700

seq1  TCCACTAGGAGGGGCACTTCCTTCTCTGACAAAGGCAGTCATTAGCAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTAGGAGGGGCACTTCCTTCTCTGACAAAGGCAGTCATTAGCAGAG  750

seq1  CCTGCGCTGGGGTCACTGGGGTCG-TGTTAGGACTCTGAGCTGATCACTG  799
       ||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCTGCGCTGGGGTCACTGGGGTCGTTGTTAGGACTCTGAGCTGATCACTG  800

seq1  TAACTGTTGTTTGTGGTTGGCCTGCTCCCTCATCTCTGAAGTCTTCACCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTTGTTTGTGGTTGGCCTGCTCCCTCATCTCTGAAGTCTTCACCT  850

seq1  CGATGCTGTTTCCTGCTGTCATGGCCCCATGATTCTGATCACCTCCCAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CGATGCTGTTTCCTGCTGTCATGGCCCCATGATTCTGATCACCTCCCAA-  899

seq1  CCCCAGA-TCTGG-ACCCCTGCGTCTGATGTCCTCTG-CCAGCCTTGC-T  945
      ||||||| ||||| ||||||||||||||||||||||| ||| |||||| |
seq2  CCCCAGATTCTGGAACCCCTGCGTCTGATGTCCTCTGCCCACCCTTGCTT  949

seq1  GTGGAGTGGACACTGAGCAACTCAGGGGAAGATGCCTACTGGGTGCGATT  995
      ||| ||| |||||||||||||||| ||||||||||||||||| |||||||
seq2  GTGCAGT-GACACTGAGCAACTCATGGGAAGATGCCTACTGGTTGCGATT  998

seq1  AGACCTGGACTTCCCTCGGGGA--CTCTCCTTCCGGAAAGTGGAGATG-C  1042
       ||||||||||  |||||||||  ||||| |||||| ||||| ||||| |
seq2  GGACCTGGACTCTCCTCGGGGACTCTCTCTTTCCGGCAAGTGAAGATGCC  1048

seq1  TTCA  1046
      ||||
seq2  TTCA  1052