BAC Information

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BAC

Clone NameB6Ng01-178L16
Chromosome7 (Build37)
Map Location 94,758,674 - 94,759,770
singlet/doubletsinglet
Overlap geneGrm5
Upstream geneOlfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4, Tyr
Downstream geneCtsc, LOC100039756, Rab38, LOC100039924, LOC666598
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178L16.bB6Ng01-178L16.g
ACCGA005635GA005636
length1,1301,090
definitionB6Ng01-178L16.b B6Ng01-178L16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttggtttagcactgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttacatatattgatattagtcccct
atctgatttaggataggtaaagatcctttcccaatctgttggtggccttt
ttgtcttattgatggtgttatttgacttacggaagttttgcaattttatg
atgtctcatttgtcaagtctcaatcttacagcacaagccattgctgttct
attcaggaatctttcccctgtgcccatatcttcaaggcttttccctactt
tctcctctataagtttcactctctctgcttttatgtggggttccttgatc
cacttagatttgactttagtacaaggagataggaatgaatcaattcccat
tcttctacatgataaccaccagttgtgccagcaccatttgttgaaaatgc
tgtcttttttccactggatggttttagctcccttgtcaaagatcaagtga
ccataggtgtgtgggttcatttctgggtcttcaattctattccattgttc
tacttgtctgttgctataccactgccatgcaggttttatcacaattgctc
tgtagtgcagcttttggtcaggcatggtgattccaccagaggttctttta
tccttgagaagagtttttgctatcctaggtttttgttattccagatgaat
ttgcagattgccctttctaaatcgttgaagaattgagttggaattttgat
ggggatttcgttgaatctgtagattgcttttggcaagatagccattttta
ctatattgatcctgccaatccatgagcatggaagatctttccatcttctg
agatcttctttaatttctttcttcagagacttgaagttctatcatacaga
tcttttcactttctttagttagagtcatgccaatgtattttatatttatt
ttgtgactattgagaagggtgttgtctccctaaatttctttctcagcctg
tttaattcttctgtgtaagagaaagcctttgaacttgtttgaagttaatt
ttataattgtagcctacttcatgagcctgcttatcagttaagcagatcct
ctgctaaaatttcaggttcacattaatatt
gaattcctgacttggtcagaagatctaagaattttttattgaagcttttc
taactttggtccaaaaacacatgagctctctggagagcttttagattttt
ttactagcaaagggagctgtctcaaccagagagagctgtctcaaagctag
ctgtctcaatcagagattatttttcatagagccaaaaaaaggctgtctct
ctgaacacacagagaacaatctgaatagctgtttcaagcagaccacagag
ccaaaagcactacaaagagctgtttagggagccatctccagcaaatcata
ggcagaaagtttagaaccacaatttaacttagtcatttgtttcatagctc
tcaaccaccccttctctaaggaaccccaacctagctgaggctggtgcttt
gcactgatgggtaagaaatatggaacattctcaagtcataaaggataaac
actcatcacacgtttaaaaaaaaaaagaataacaaaatgaatctaaagct
cagtatgtcaagtaaagtaagcctgacaagtaaagacaaataccatcctt
tccctcccatgcatgtatgtaagtaataaataattgacctaaaaataaac
agtcatggctagatgttgtaactagggtacagagatagaataaagggatt
ggttagggtttttcagcatccactgcttggatatacgaatatcacattta
atccaaattaacatatacaattaacttgttgctaaatgtttttttttaaa
tgtttaactaaacatactatgaattgcacagtgaaaatctttaaaccaaa
tatctattattgttatttgtttacataattatcagaaagctgtatcacaa
atccagggtgctgcactgcagtgtctaagctaacttaaagatgttctagt
gattctgtcctaccaggaaaacctattgatacatttcccctagagcattg
ctgacatttttttagaacaattagcatcttcatatcattaaacagggata
gaccagtgaaactaaaacaattaaaagtgagcataaacagtaattcacat
tagtcaagcagatacttgccaccttgctttttattcaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94758674_94759770
seq2: B6Ng01-178L16.g_66_1155 (reverse)

seq1  TTTTAAATAAAAAACAAGGTGGCAAAGTATCTGCCTTGACTAATTGTGAA  50
      |||| |||||||| ||||||||| ||||||||| ||||||||| ||||||
seq2  TTTTGAATAAAAAGCAAGGTGGC-AAGTATCTG-CTTGACTAA-TGTGAA  47

seq1  ATACTGTTTATGCTTCACTTTTTTATTGTTTTAGTTTTCACTGGTTCTTA  100
       |||||||||||| |||| |||| |||||||||| ||||||||||   ||
seq2  TTACTGTTTATGC-TCAC-TTTTAATTGTTTTAG-TTTCACTGGT--CTA  92

seq1  TTCCTGTTTAATGATATGAAGATGCTAATTTGTTCT-AAAAAATGTCAGC  149
      | |||||||||||||||||||||||||| ||||||| |||||||||||||
seq2  TCCCTGTTTAATGATATGAAGATGCTAA-TTGTTCTAAAAAAATGTCAGC  141

seq1  AATGCTCTAGGGGAAAATGTATCAATAGGTTTTCCTGGTAGGACAGAATC  199
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AATGCTCTAGGGG-AAATGTATCAATAGGTTTTCCTGGTAGGACAGAATC  190

seq1  ACTAGAACATCTTTAAGTTAGCTTAGACACTGCAGTGCAGCA-CCTGGAT  248
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACTAGAACATCTTTAAGTTAGCTTAGACACTGCAGTGCAGCACCCTGGAT  240

seq1  TTGTGATACAGCTTTCTGATAATTATGTAAACAAATAACAATAATAGATA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATACAGCTTTCTGATAATTATGTAAACAAATAACAATAATAGATA  290

seq1  TTTGGTTTAAAGATTTTCACTGTGCAATTCATAGTATGTTTAGTTAAACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTAAAGATTTTCACTGTGCAATTCATAGTATGTTTAGTTAAACA  340

seq1  TTT-AAAAAAAACATTTAGCAACAAGTTAATTGTATATGTTAATTTGGAT  397
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAAAAACATTTAGCAACAAGTTAATTGTATATGTTAATTTGGAT  390

seq1  TAAATGTGATATTCGTATATCCAAGCAGTGGATGCTGAAAAACCCTAACC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTGATATTCGTATATCCAAGCAGTGGATGCTGAAAAACCCTAACC  440

seq1  AATCCCTTTATTCTATCTCTGTACCCTAGTTACAACATCTAGCCATGACT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTTTATTCTATCTCTGTACCCTAGTTACAACATCTAGCCATGACT  490

seq1  GTTTATTTTTAGGTCAATTATTTATTACTTACATACATGCATGGGAGGGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTTTAGGTCAATTATTTATTACTTACATACATGCATGGGAGGGA  540

seq1  AAGGATGGTATTTGTCTTTACTTGTCAGGCTTACTTTACTTGACATACTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGGTATTTGTCTTTACTTGTCAGGCTTACTTTACTTGACATACTG  590

seq1  AGCTTTAGATTCATTTTGTTATTCTTTTTTTTTTTAAACGTGTGATGAGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTAGATTCATTTTGTTATTCTTTTTTTTTTTAAACGTGTGATGAGT  640

seq1  GTTTATCCTTTATGACTTGAGAATGTTCCATATTTCTTACCCATCAGTGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCCTTTATGACTTGAGAATGTTCCATATTTCTTACCCATCAGTGC  690

seq1  AAAGCACCAGCCTCAGCTAGGTTGGGGTTCCTTAGAGAAGGGGTGGTTGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACCAGCCTCAGCTAGGTTGGGGTTCCTTAGAGAAGGGGTGGTTGA  740

seq1  GAGCTATGAAACAAATGACTAAGTTAAATTGTGGTTCTAAACTTTCTGCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTATGAAACAAATGACTAAGTTAAATTGTGGTTCTAAACTTTCTGCC  790

seq1  TATGATTTGCTGGAGATGGCTCCCTAAACAGCTCTTTGTAGTGCTTTTGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTTGCTGGAGATGGCTCCCTAAACAGCTCTTTGTAGTGCTTTTGG  840

seq1  CTCTGTGGTCTGCTTGAAACAGCTATTCAGATTGTTCTCTGTGTGTTCAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGGTCTGCTTGAAACAGCTATTCAGATTGTTCTCTGTGTGTTCAG  890

seq1  AGAGACAGCCTTTTTTTGGCTCTATGAAAAATAATCTCTGATTGAGACAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGCCTTTTTTTGGCTCTATGAAAAATAATCTCTGATTGAGACAG  940

seq1  CTAGCTTTGAGACAGCTCTCTCTGGTTGAGACAGCTCCCTTTGCTAGTAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTTTGAGACAGCTCTCTCTGGTTGAGACAGCTCCCTTTGCTAGTAA  990

seq1  AAAAATCTAAAAGCTCTCCAGAGAGCTCATGTGTTTTTGGACCAAAGTTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCTAAAAGCTCTCCAGAGAGCTCATGTGTTTTTGGACCAAAGTTA  1040

seq1  GAAAAGCTTCAATAAAAAATTCTTAGATCTTCTGACCAAGTCAGGAATTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCTTCAATAAAAAATTCTTAGATCTTCTGACCAAGTCAGGAATTC  1090